Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32302
(516 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC8E4.05c |||fumarate lyase superfamily|Schizosaccharomyces po... 28 0.72
SPAC6B12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 28 0.95
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 27 1.7
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 27 2.2
SPAC212.01c |||S. pombe specific DUF999 family protein 2|Schizos... 26 3.8
SPBCPT2R1.04c |||S. pombe specific DUF999 protein family 10|Schi... 26 3.8
SPAC212.04c |||S. pombe specific DUF999 family protein 1|Schizos... 26 3.8
SPBCPT2R1.01c ||SPBPB2B2.20c|S. pombe specific DUF999 protein fa... 26 3.8
SPBC1348.01 |||S. pombe specific DUF999 protein family 5|Schizos... 26 3.8
SPAC750.06c |||S. pombe specific DUF999 protein family 4|Schizos... 26 3.8
SPBC30D10.10c |tor1||phosphatidylinositol kinase Tor1|Schizosacc... 26 3.8
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 25 5.1
SPAC22G7.04 |ubp13|pan2|poly|Schizosaccharomyces pombe|chr 1|||M... 25 6.7
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo... 25 6.7
SPCC1795.09 |yps1||aspartic protease Yps1|Schizosaccharomyces po... 25 8.9
SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces... 25 8.9
SPAC1B3.10c |||SEL1 repeat protein, unknown biological role|Schi... 25 8.9
SPBC6B1.04 |mde4||monopolin-like complex subunit Mde4|Schizosacc... 25 8.9
SPAC869.04 |||formamidase-like protein|Schizosaccharomyces pombe... 25 8.9
>SPBC8E4.05c |||fumarate lyase superfamily|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 447
Score = 28.3 bits (60), Expect = 0.72
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 123 TRESTDTDTAEQVIDSFRILAG 188
T++ TD+ T Q+IDSF+I+ G
Sbjct: 108 TQDVTDSATVRQMIDSFKIIKG 129
>SPAC6B12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 456
Score = 27.9 bits (59), Expect = 0.95
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -1
Query: 117 SPGTNRMTRSRYCWDRQQQEYVGSRVLLAC 28
SP + + +S YCW + + Y+ S + ++C
Sbjct: 206 SPNSKKKYKSLYCWRKIFEIYMDSDIFISC 235
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 27.1 bits (57), Expect = 1.7
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 54 RILAVVDPNNTGYVSFDSFLDFMTRESTDTDTAEQVIDSFRILAGDKP-YITAEEL 218
R+ +VVD + G V F F++ ++ S + E++ +F+I D+ YI+ EL
Sbjct: 60 RLFSVVDEDGGGDVDFQEFINSLSVFSVHGNKEEKLKFAFKIYDIDRDGYISNGEL 115
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 26.6 bits (56), Expect = 2.2
Identities = 9/33 (27%), Positives = 19/33 (57%)
Frame = +3
Query: 24 KDRQGELDFQRILAVVDPNNTGYVSFDSFLDFM 122
++ + E ++ + V D +N+GY+ F D+M
Sbjct: 72 RETESEEEYIKAFRVFDKDNSGYIETAKFADYM 104
>SPAC212.01c |||S. pombe specific DUF999 family protein
2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 280
Score = 25.8 bits (54), Expect = 3.8
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = +3
Query: 381 DIIFSRVINQRRHKMRRPKSHSHSNTLKRAREATMAK*NKLKTF 512
D+ +N++ + R+ + +NT+K ++ K NK+K F
Sbjct: 35 DLCKPEKVNKQSQRSRQSRQSLFTNTIKPQKDKMNIKTNKIKEF 78
>SPBCPT2R1.04c |||S. pombe specific DUF999 protein family
10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 280
Score = 25.8 bits (54), Expect = 3.8
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = +3
Query: 381 DIIFSRVINQRRHKMRRPKSHSHSNTLKRAREATMAK*NKLKTF 512
D+ +N++ + R+ + +NT+K ++ K NK+K F
Sbjct: 35 DLCKPEKVNKQSQRSRQSRQSLFTNTIKPQKDKMNIKTNKIKEF 78
>SPAC212.04c |||S. pombe specific DUF999 family protein
1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 288
Score = 25.8 bits (54), Expect = 3.8
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = +3
Query: 381 DIIFSRVINQRRHKMRRPKSHSHSNTLKRAREATMAK*NKLKTF 512
D+ +N++ + R+ + +NT+K ++ K NK+K F
Sbjct: 35 DLCKPEKVNKQSQRSRQSRQSLFTNTIKPQKDKMNIKTNKIKEF 78
>SPBCPT2R1.01c ||SPBPB2B2.20c|S. pombe specific DUF999 protein
family 9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 269
Score = 25.8 bits (54), Expect = 3.8
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = +3
Query: 381 DIIFSRVINQRRHKMRRPKSHSHSNTLKRAREATMAK*NKLKTF 512
D+ +N++ + R+ + +NT+K ++ K NK+K F
Sbjct: 35 DLCKPEKVNKQSQRSRQSRQSLFTNTIKPQKDKMNIKTNKIKEF 78
>SPBC1348.01 |||S. pombe specific DUF999 protein family
5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 269
Score = 25.8 bits (54), Expect = 3.8
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = +3
Query: 381 DIIFSRVINQRRHKMRRPKSHSHSNTLKRAREATMAK*NKLKTF 512
D+ +N++ + R+ + +NT+K ++ K NK+K F
Sbjct: 35 DLCKPEKVNKQSQRSRQSRQSLFTNTIKPQKDKMNIKTNKIKEF 78
>SPAC750.06c |||S. pombe specific DUF999 protein family
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 280
Score = 25.8 bits (54), Expect = 3.8
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = +3
Query: 381 DIIFSRVINQRRHKMRRPKSHSHSNTLKRAREATMAK*NKLKTF 512
D+ +N++ + R+ + +NT+K ++ K NK+K F
Sbjct: 35 DLCKPEKVNKQSQRSRQSRQSLFTNTIKPQKDKMNIKTNKIKEF 78
>SPBC30D10.10c |tor1||phosphatidylinositol kinase
Tor1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2335
Score = 25.8 bits (54), Expect = 3.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 159 VIDSFRILAGDKPYITAEELRRELPPDQA 245
V+ F+ KP+ T +E+ +LP DQA
Sbjct: 1083 VVKEFKPRPSTKPFSTQDEVLTKLPVDQA 1111
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 25.4 bits (53), Expect = 5.1
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = +3
Query: 72 DPNNTGYVSFDSFLDFMTRESTDTDTAEQVIDSFRILAGDKPY 200
D TG S DF + ES ++SF I+ D P+
Sbjct: 1675 DNIGTGSYSNQQSFDFKSSESDSFPQKSPSVESFSIIDNDNPF 1717
>SPAC22G7.04 |ubp13|pan2|poly|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1115
Score = 25.0 bits (52), Expect = 6.7
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 219 RRELPPDQAEYCVARMP 269
R +LPP EYC+A P
Sbjct: 685 RVDLPPGWCEYCLAHQP 701
>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
Ino80|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1604
Score = 25.0 bits (52), Expect = 6.7
Identities = 7/24 (29%), Positives = 18/24 (75%)
Frame = +2
Query: 68 CRSQQYRLRVIRFVPGLYDQRVDG 139
C+ ++Y+L+ + ++ LY+Q ++G
Sbjct: 840 CKLKEYQLKGLNWLANLYEQGING 863
>SPCC1795.09 |yps1||aspartic protease Yps1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 521
Score = 24.6 bits (51), Expect = 8.9
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -2
Query: 431 SSHFMPSLIDDTAEDDIL*YGPFSLHLE 348
SS P+ ++ ++DIL Y FS++L+
Sbjct: 219 SSFSPPTFLEQLVKEDILAYPAFSMYLD 246
>SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3131
Score = 24.6 bits (51), Expect = 8.9
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 27 DRQGELDFQRILAVVDPNNTGYVSFD 104
DR G Q + +DPN TGYV D
Sbjct: 1880 DRSGHR--QSSVIKIDPNETGYVPLD 1903
>SPAC1B3.10c |||SEL1 repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 680
Score = 24.6 bits (51), Expect = 8.9
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +3
Query: 378 KDIIFSRVINQRRHKMRRPKSHSHSN 455
+D+ + +I QR H + +S SH N
Sbjct: 76 EDVTYEEIIIQRNHAIELLRSASHDN 101
>SPBC6B1.04 |mde4||monopolin-like complex subunit
Mde4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 24.6 bits (51), Expect = 8.9
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +3
Query: 105 SFLDFMTRESTDTDTAEQVIDSFRILAGDK 194
SFLD + + +TD++ + +D + L +K
Sbjct: 48 SFLDALKQSATDSELLHKNLDEIKFLQNEK 77
>SPAC869.04 |||formamidase-like protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 410
Score = 24.6 bits (51), Expect = 8.9
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 104 IE*HVAGIVGIDNSKNTLEVEFSL 33
I+ HVAGIV I NS T+ V +
Sbjct: 363 IQGHVAGIVDIPNSCTTIGVPMDI 386
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,804,432
Number of Sequences: 5004
Number of extensions: 32294
Number of successful extensions: 111
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 109
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 208287218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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