Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32302
(516 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1738 - 29141829-29141989,29142112-29142343,29142751-291427... 46 2e-05
03_02_0817 + 11492699-11492774,11493605-11493978 46 2e-05
01_01_1223 + 9886709-9886784,9887566-9887935,9888028-9888097 46 2e-05
01_01_1156 - 9194477-9194485,9194801-9195156,9197783-9197858 46 2e-05
05_05_0309 - 23987669-23988042,23989485-23989560 45 4e-05
10_07_0048 - 12354566-12354639,12355563-12355665,12355781-123559... 34 0.059
02_01_0684 - 5071994-5072134,5072240-5072365,5072452-5072608,507... 33 0.18
11_02_0073 - 8020401-8020512,8020594-8020679,8020761-8020921,802... 31 0.42
05_05_0050 + 21916020-21916489,21916906-21917380,21917472-21918278 31 0.73
02_02_0628 + 12365109-12365150,12366315-12366411,12366489-123665... 30 0.96
01_06_0308 - 28369843-28370925,28372249-28372944 30 0.96
01_07_0179 - 41814886-41815074,41815172-41815222,41815365-418154... 30 1.3
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 1.7
10_08_0683 - 19860777-19861070,19861677-19861874,19862498-198626... 29 2.2
10_01_0298 - 3094197-3094307,3095093-3095253,3095462-3095666,309... 29 2.2
05_04_0193 + 18939869-18939988,18940714-18941012,18941078-189411... 29 2.2
03_02_0773 + 11063556-11064077 28 5.1
08_02_0270 + 15108178-15108587,15108678-15108774,15109445-151094... 27 6.8
07_03_1452 - 26629219-26629428,26630113-26630280,26630363-266304... 27 6.8
12_02_0249 + 16427590-16428975,16428990-16429082 27 8.9
06_03_1384 + 29786028-29786657,29788581-29788711,29788987-297890... 27 8.9
04_04_1322 + 32640414-32642327 27 8.9
>07_03_1738 -
29141829-29141989,29142112-29142343,29142751-29142792,
29143312-29143410,29143575-29143667,29143742-29143876,
29144251-29144290,29144475-29144844,29146575-29146650
Length = 415
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Frame = +3
Query: 39 ELDFQRILAVVDPNNTGYVSFDSFLDFMTRESTDTDTAEQVIDSFRILAGDK-PYITAEE 215
E + Q ++ VD + G + F FL+ M R+ DTD+ E++ ++FR+ D+ +I+A E
Sbjct: 46 EAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAE 105
Query: 216 LR 221
LR
Sbjct: 106 LR 107
>03_02_0817 + 11492699-11492774,11493605-11493978
Length = 149
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Frame = +3
Query: 39 ELDFQRILAVVDPNNTGYVSFDSFLDFMTRESTDTDTAEQVIDSFRILAGDK-PYITAEE 215
E + Q ++ VD + G + F FL+ M R+ DTD+ E++ ++FR+ D+ +I+A E
Sbjct: 46 EAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAE 105
Query: 216 LR 221
LR
Sbjct: 106 LR 107
>01_01_1223 + 9886709-9886784,9887566-9887935,9888028-9888097
Length = 171
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Frame = +3
Query: 39 ELDFQRILAVVDPNNTGYVSFDSFLDFMTRESTDTDTAEQVIDSFRILAGDK-PYITAEE 215
E + Q ++ VD + G + F FL+ M R+ DTD+ E++ ++FR+ D+ +I+A E
Sbjct: 46 EAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAE 105
Query: 216 LR 221
LR
Sbjct: 106 LR 107
>01_01_1156 - 9194477-9194485,9194801-9195156,9197783-9197858
Length = 146
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Frame = +3
Query: 39 ELDFQRILAVVDPNNTGYVSFDSFLDFMTRESTDTDTAEQVIDSFRILAGDK-PYITAEE 215
E + Q ++ VD + G + F FL+ M R+ DTD+ E++ ++FR+ D+ +I+A E
Sbjct: 46 EAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAE 105
Query: 216 LR 221
LR
Sbjct: 106 LR 107
>05_05_0309 - 23987669-23988042,23989485-23989560
Length = 149
Score = 44.8 bits (101), Expect = 4e-05
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Frame = +3
Query: 39 ELDFQRILAVVDPNNTGYVSFDSFLDFMTRESTDTDTAEQVIDSFRILAGDK-PYITAEE 215
E + Q ++ VD + G + F FL+ M ++ DTD+ E++ ++FR+ D+ +I+A E
Sbjct: 46 EAELQDMINEVDADGNGTIDFPEFLNLMAKKMKDTDSEEELKEAFRVFDKDQNGFISAAE 105
Query: 216 LR 221
LR
Sbjct: 106 LR 107
>10_07_0048 -
12354566-12354639,12355563-12355665,12355781-12355933,
12356105-12356132,12356414-12356450,12356563-12356746
Length = 192
Score = 34.3 bits (75), Expect = 0.059
Identities = 14/46 (30%), Positives = 28/46 (60%)
Frame = +3
Query: 54 RILAVVDPNNTGYVSFDSFLDFMTRESTDTDTAEQVIDSFRILAGD 191
+++A VD + +G + FD F+ MT + + D E++ +F+I+ D
Sbjct: 87 QMIAEVDKDGSGTIDFDEFVHMMTDKMGERDAREELNKAFKIIDKD 132
>02_01_0684 -
5071994-5072134,5072240-5072365,5072452-5072608,
5073115-5073224,5073309-5073456,5073581-5073735,
5074144-5074249,5074337-5074436,5074775-5074880,
5075013-5075444
Length = 526
Score = 32.7 bits (71), Expect = 0.18
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +3
Query: 69 VDPNNTGYVSFDSFLDFMTRESTDT-DTAEQVIDSFRIL-AGDKPYITAEELRRELPPDQ 242
+D NTG+V+ D+F+DF + T D A QV F IL ++ ++T L E +
Sbjct: 203 IDKENTGFVTRDAFIDFWLNSNMVTMDVATQV---FIILKQKNQDFLTKHCLPAETVVYR 259
Query: 243 AEYCVARM 266
YC++R+
Sbjct: 260 IFYCLSRI 267
>11_02_0073 -
8020401-8020512,8020594-8020679,8020761-8020921,
8021196-8021400,8021664-8021697,8022352-8022422,
8023363-8023542,8023625-8023765,8023859-8023975,
8024074-8024469
Length = 500
Score = 31.5 bits (68), Expect = 0.42
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Frame = -3
Query: 307 SREPGGAPG---PRYGGMRATQYSAWSGGSSRRNSSAVMYGLSPA 182
S +P GAP P YGG Y A+ GG N ++YG PA
Sbjct: 401 SFKPAGAPNFPLPPYGGYMGDPYGAYGGGGPGFN-QPMIYGRGPA 444
>05_05_0050 + 21916020-21916489,21916906-21917380,21917472-21918278
Length = 583
Score = 30.7 bits (66), Expect = 0.73
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 65 CCRSQQYRLRVIRFVPGLYDQRVDGYRHRRTSH 163
CC S+Q R IR +P L V GY+ +T H
Sbjct: 489 CCFSEQALARAIRSMPSLRYVWVQGYKASKTGH 521
>02_02_0628 +
12365109-12365150,12366315-12366411,12366489-12366554,
12367884-12367963,12368051-12368125,12368232-12368381,
12369816-12369881,12370141-12370206,12370653-12370763,
12370917-12371003,12371087-12371193,12372141-12372255,
12372472-12372537,12373521-12373615,12373700-12373880
Length = 467
Score = 30.3 bits (65), Expect = 0.96
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +3
Query: 96 SFDSFLDFMTREST---DTDTAEQVIDSFRILAGDKPYITAEELRRELPP 236
S FL++ ++ D E+ +D + +A PY TA++ R+ LPP
Sbjct: 196 SSSKFLNYFVKQIVPVFDKIPEEKKLDLLKTVAASSPYATAQDARQLLPP 245
>01_06_0308 - 28369843-28370925,28372249-28372944
Length = 592
Score = 30.3 bits (65), Expect = 0.96
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -3
Query: 295 GGAPGPRYGGMRATQYSAWSGGSSRRNSSAVMYGLSPAKILKLSMTCSAVSVSV 134
GGA G G + + Y AWS + SAV Y S A ++ + SA ++ V
Sbjct: 33 GGAGGDGAGCVLSNAYGAWSSDRADCPVSAVAYPASEADVVAVVADASAKNMPV 86
>01_07_0179 -
41814886-41815074,41815172-41815222,41815365-41815469,
41815852-41815945,41816056-41816150,41816581-41816700,
41816737-41816832,41817272-41817569,41817777-41817853,
41818932-41819447
Length = 546
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +3
Query: 45 DFQRILAVVDPNNTGYVSFDSFLDFMTRESTDTDTAEQVI-DSFRILAGD-KPYITAEEL 218
+ R++A D + G++S D F S D E+ + +FR+ D I+A EL
Sbjct: 76 ELARMMAEADADGDGFISLDEFAALNATASGDAAAVEEDLRHAFRVFDADGNGTISAAEL 135
Query: 219 RREL 230
R L
Sbjct: 136 ARVL 139
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 228 LPPDQAEYCVARMPPYRGPGAPP 296
LPP +Y VA PP G GAPP
Sbjct: 1088 LPPTLGDYGVAPPPPSIGAGAPP 1110
>10_08_0683 -
19860777-19861070,19861677-19861874,19862498-19862659,
19862763-19862911,19863089-19863236,19863317-19863385,
19863471-19863719,19863937-19864131,19864444-19864560,
19864978-19866537
Length = 1046
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = -3
Query: 298 PGGAPGPRYGGMRATQYSAWSGGSSRRNSSAVMYGLSPA 182
PGG GGM+ Y +GGS V YG SPA
Sbjct: 185 PGGGSSHGGGGMQMVPYGPPAGGSQHGGMQMVAYG-SPA 222
>10_01_0298 -
3094197-3094307,3095093-3095253,3095462-3095666,
3096349-3096534,3096616-3096756,3096843-3096959,
3097046-3097456
Length = 443
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Frame = -3
Query: 307 SREPGGAPG---PRYGGMRATQYSAWSGG 230
S +PGGAP P YGG Y A+ GG
Sbjct: 373 SFKPGGAPNFPLPPYGGYMGDPYGAYGGG 401
>05_04_0193 +
18939869-18939988,18940714-18941012,18941078-18941186,
18941874-18941999,18942178-18942218,18942614-18942744,
18943218-18943291,18944215-18944450,18944543-18944863,
18945023-18945086
Length = 506
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 510 KFLIYFISPLSLLWPSLMYLNDYVTWVF 427
K F +P S WP ++YL DYV + F
Sbjct: 310 KIFAAFGTPKSSQWPDMVYLPDYVEYQF 337
>03_02_0773 + 11063556-11064077
Length = 173
Score = 27.9 bits (59), Expect = 5.1
Identities = 13/55 (23%), Positives = 25/55 (45%)
Frame = +3
Query: 27 DRQGELDFQRILAVVDPNNTGYVSFDSFLDFMTRESTDTDTAEQVIDSFRILAGD 191
+R + D ++A D +N G+V +D F + R + + D R++ D
Sbjct: 53 ERFDDEDIAAMIAAADVDNDGFVQYDEFERLLGRAAAGAGCRPAMEDVLRVMDRD 107
>08_02_0270 + 15108178-15108587,15108678-15108774,15109445-15109492,
15109583-15109806,15111367-15111463,15111556-15111651,
15112297-15112544,15112632-15112715,15112787-15113236,
15114880-15115024,15115116-15115217,15115677-15115769,
15117308-15117349,15119085-15119113,15119210-15119251,
15119922-15119997,15120764-15120835,15121208-15121326,
15121428-15121491,15121576-15123009
Length = 1323
Score = 27.5 bits (58), Expect = 6.8
Identities = 13/46 (28%), Positives = 19/46 (41%)
Frame = +3
Query: 162 IDSFRILAGDKPYITAEELRRELPPDQAEYCVARMPPYRGPGAPPG 299
ID G + A + RR+ PD + + PY PG+ G
Sbjct: 1275 IDETSYRTGQRGPYNASDFRRDRHPDDMNFALHNQYPYPHPGSSGG 1320
>07_03_1452 -
26629219-26629428,26630113-26630280,26630363-26630425,
26630499-26630606,26630820-26630932,26631026-26631322,
26631424-26631502,26631733-26631841,26631927-26631968,
26632467-26632597,26633482-26633623,26633713-26633828,
26634121-26634657
Length = 704
Score = 27.5 bits (58), Expect = 6.8
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 66 VVDPNNTGYVSFDSFLDFMTRESTDTDTAEQVID 167
++ PN GY+S + + + STD +VID
Sbjct: 542 LLGPNKNGYISLQNLKTALVKNSTDAMKDSRVID 575
>12_02_0249 + 16427590-16428975,16428990-16429082
Length = 492
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -3
Query: 247 SAWSGGSSRRNSSAVMYGLS-PAKILKLSMTCSAVSV 140
S+W GG R +S A++ G S +I + +TC +++
Sbjct: 344 SSWRGGDRRSSSLALLVGRSTQVEIWTMKLTCHGMAL 380
>06_03_1384 +
29786028-29786657,29788581-29788711,29788987-29789028,
29789383-29789441,29789774-29790070,29790180-29790289,
29790966-29791070,29791201-29791263,29791766-29791933,
29792111-29792248
Length = 580
Score = 27.1 bits (57), Expect = 8.9
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +3
Query: 30 RQGELDFQRI-LAVVDPNNTGYVSFDSFLDFMTRESTDTDTAEQVIDSFRILAGDKPYIT 206
R+ EL + ++ +++P + G+VS D+F +TR TD +V++ L +P
Sbjct: 430 REDELLYLKLQFKLLEPRD-GFVSLDNFRTALTRYLTDAMKESRVLEFLHAL---EPL-- 483
Query: 207 AEELRRELPPDQAEYCVARMPPYR 278
RR D E+C A + PY+
Sbjct: 484 --AYRR---MDFEEFCAAAISPYQ 502
>04_04_1322 + 32640414-32642327
Length = 637
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 369 AISKDIIFSRVINQRRHKMRRPKSHSHSNTLKRAREAT 482
A + D+IFS ++R R PK + K AR AT
Sbjct: 212 AATSDMIFSSTSTEQRSHQRHPKKCRFNGCSKGARGAT 249
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,400,480
Number of Sequences: 37544
Number of extensions: 242584
Number of successful extensions: 960
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 959
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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