Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32302
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   5.7  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   5.7  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   5.7  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    21   7.5  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    21   7.5  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   10.0 

>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
          protein STG-1 protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -1

Query: 51 GSRVLLACPCRCC 13
          G  V+++C C CC
Sbjct: 4  GRHVVMSCCCWCC 16


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 53  LEVEFSLPVLADAV 12
           LEV+ +LP+L D V
Sbjct: 115 LEVQLNLPILKDGV 128


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 53  LEVEFSLPVLADAV 12
           LEV+ +LP+L D V
Sbjct: 153 LEVQLNLPILKDGV 166


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 30/120 (25%), Positives = 40/120 (33%), Gaps = 2/120 (1%)
 Frame = +3

Query: 138 DTDTAEQVIDSFRILAGDKPYITAEELRRELPPDQ--AEYCVARMPPYRGPGAPPGSLDY 311
           DT   E VI   R   G KP    EE++  L       E+    +   +  G    S  Y
Sbjct: 153 DTINPEDVILIRRTGEGSKPIFEREEIKNVLTKINKIEEHDTVLVVNIKKSGNE--SKKY 210

Query: 312 MAFSTALYGETDL*MQREGAISKDIIFSRVINQRRHKMRRPKSHSHSNTLKRAREATMAK 491
              S +L   T          S++   SR  N+   K  R     H+   K   E T  K
Sbjct: 211 ATSSNSLRSRTHGFQHTSSHYSRERSCSRDRNREYRKKDRRYEKLHNEKEKLLEERTSCK 270


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 30/120 (25%), Positives = 40/120 (33%), Gaps = 2/120 (1%)
 Frame = +3

Query: 138 DTDTAEQVIDSFRILAGDKPYITAEELRRELPPDQ--AEYCVARMPPYRGPGAPPGSLDY 311
           DT   E VI   R   G KP    EE++  L       E+    +   +  G    S  Y
Sbjct: 153 DTINPEDVILIRRTGEGSKPIFEREEIKNVLTKINKIEEHDTVLVVNIKKSGNE--SKKY 210

Query: 312 MAFSTALYGETDL*MQREGAISKDIIFSRVINQRRHKMRRPKSHSHSNTLKRAREATMAK 491
              S +L   T          S++   SR  N+   K  R     H+   K   E T  K
Sbjct: 211 ATSSNSLRSRTHGFQHTSSHYSRERSCSRDRNREYRKKDRRYEKLHNEKEKLLEERTSCK 270


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
          protein.
          Length = 402

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 31 GKENSTSNVFLLLSI 75
          GKE+   N F LLS+
Sbjct: 11 GKEDQPENTFSLLSV 25


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,800
Number of Sequences: 438
Number of extensions: 2666
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)