Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32300
(516 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 39 5e-04
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 34 0.011
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 33 0.019
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 33 0.025
SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces... 32 0.044
SPBC947.12 |kms2||spindle pole body protein Kms2|Schizosaccharom... 32 0.059
SPAC20G8.10c ||SPAC3A12.01c|beclin family protein|Schizosaccharo... 32 0.059
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 32 0.059
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 32 0.059
SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr ... 31 0.14
SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 30 0.18
SPBC6B1.04 |mde4||monopolin-like complex subunit Mde4|Schizosacc... 30 0.24
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 29 0.31
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 29 0.41
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 29 0.41
SPCC18B5.07c |nup61||nucleoporin Nup61|Schizosaccharomyces pombe... 29 0.55
SPBC19G7.16 |iws1||transcription elongation factor complex subun... 28 0.72
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 28 0.95
SPCC162.06c |||vacuolar sorting protein Vps60|Schizosaccharomyce... 28 0.95
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 28 0.95
SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineur... 27 1.3
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 27 1.3
SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1 |Schizosacch... 27 1.7
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 27 2.2
SPBC1347.04 |tim54||TIM22 inner membrane protein import complex ... 27 2.2
SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regula... 26 2.9
SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr 2|... 26 2.9
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 3.8
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 26 3.8
SPAC4F10.17 |||conserved fungal protein|Schizosaccharomyces pomb... 26 3.8
SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering compo... 26 3.8
SPBC1709.02c |vas2|SPBC1734.18c|valine-tRNA ligase Vas2 |Schizos... 26 3.8
SPBC16G5.11c |bag101|bag1-a, bag1|BAG family molecular chaperone... 26 3.8
SPBC947.07 |||ribosome biogenesis protein Rrp14-C|Schizosaccharo... 26 3.8
SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3 B... 25 5.1
SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit Smc6|Schizosac... 25 5.1
SPBC21D10.10 |||bromodomain protein|Schizosaccharomyces pombe|ch... 25 5.1
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo... 25 5.1
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 25 6.7
SPBC31F10.04c |srb4|med17|mediator complex subunit Srb4|Schizosa... 25 6.7
SPBC14F5.07 |||ER-localized ubiquitin ligase |Schizosaccharomyce... 25 6.7
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 25 6.7
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 25 8.9
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 25 8.9
SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr ... 25 8.9
SPBC14F5.11c |mug186||sorting nexin Snx41|Schizosaccharomyces po... 25 8.9
SPBC3E7.05c |||conserved eukaryotic protein|Schizosaccharomyces ... 25 8.9
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 38.7 bits (86), Expect = 5e-04
Identities = 25/98 (25%), Positives = 47/98 (47%)
Frame = +2
Query: 14 GS*KNKTTKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQ 193
GS K+ T ++++M +K E + + Q DA + E+E + L+ I
Sbjct: 357 GSLKDSRTSNSQLEEEMVELK-ESNRTI------HSQLTDAESKLSSFEQENKSLKGSID 409
Query: 194 TIENELDQTQESLMQVNGKLEEKEKALQNAESEVAALN 307
+N L + + QV+ +LEE +L +A ++A +N
Sbjct: 410 EYQNNLSSKDKMVKQVSSQLEEARSSLAHATGKLAEIN 447
Score = 32.7 bits (71), Expect = 0.033
Identities = 24/103 (23%), Positives = 47/103 (45%), Gaps = 10/103 (9%)
Frame = +2
Query: 26 NKTTKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEK---AEEEARQLQKKIQT 196
N ++ ++ K+ A LE +N + + KD N + +EE+ QKK+
Sbjct: 134 NLLNELKQVRSKLAA--LEHENGILSLQLSSSNKKDKNTSSVTTLTSEEDVSYFQKKLTN 191
Query: 197 IENELDQTQ-------ESLMQVNGKLEEKEKALQNAESEVAAL 304
+E+ Q L+ V KL++KEK + + +V+++
Sbjct: 192 MESNFSAKQSEAYDLSRQLLTVTEKLDKKEKDYEKIKEDVSSI 234
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 34.3 bits (75), Expect = 0.011
Identities = 26/117 (22%), Positives = 49/117 (41%), Gaps = 4/117 (3%)
Frame = +2
Query: 107 AMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQT----QESLMQVNGKLEEKEKAL 274
A EQQ + E++ Q +++T+ENEL Q QE + Q + +E + +
Sbjct: 415 AELEQQLLATRGQLEQSNVLLNQYDARVRTLENELSQAGVNLQEQIHQNDDLIESLKNQI 474
Query: 275 QNAESEVAALNXXXXXXXXXXXXXXXXXATATAKLSEASQAADESERARKVLENRSL 445
+++ AL K S A +A D+ E+ + ++N++L
Sbjct: 475 LTWKNKYEALAKLYTQLRQEHLDLLSKYKQIQLKASSAQEAIDKKEKMEREMKNKNL 531
Score = 32.3 bits (70), Expect = 0.044
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +2
Query: 56 KKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLM 235
K++Q A+D+ E++ K+ NL E + + +++T+ QES
Sbjct: 503 KQIQLKASSAQEAIDKKEKMEREMKNKNLELADMILERDRARHELETMHRSQRDKQESTE 562
Query: 236 QVNGKLEEKEKALQ-NAESEVAAL 304
+ L+EK +L+ N SEV+ L
Sbjct: 563 RELRLLQEKAASLERNKSSEVSNL 586
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 33.5 bits (73), Expect = 0.019
Identities = 19/74 (25%), Positives = 39/74 (52%)
Frame = +2
Query: 86 DNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKE 265
D+ A E+ + A+ E+ +EE R+L++KI++ + L+ Q S + ++E+K+
Sbjct: 584 DDQQTTEAPFEEPDEPAHEPTEEEQEEMRKLEEKIESTKYGLETIQTSGKTIKQRIEQKK 643
Query: 266 KALQNAESEVAALN 307
L E+ L+
Sbjct: 644 TRLMILREELQELD 657
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 33.1 bits (72), Expect = 0.025
Identities = 21/93 (22%), Positives = 46/93 (49%)
Frame = +2
Query: 26 NKTTKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIEN 205
+K + +A++K+++++K + A+ +Q K+E+E + +K++ +N
Sbjct: 1448 SKNAENEAMQKEIESLKDSNHQLQESASSDAEQITKEQFEQLKSEKE--RTEKELADSKN 1505
Query: 206 ELDQTQESLMQVNGKLEEKEKALQNAESEVAAL 304
EL+ Q + +GK E + N E E+ L
Sbjct: 1506 ELEHLQSEAVDADGKTE-----ISNLEKEIHEL 1533
Score = 32.7 bits (71), Expect = 0.033
Identities = 18/76 (23%), Positives = 41/76 (53%)
Frame = +2
Query: 65 QAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVN 244
+++ LEK N L+++ + +++KD + +E + LQ+++ + + E+ L N
Sbjct: 718 RSLALEKLNDLEKSLVLSERSKD------ELDESYKSLQEQLASKKIEVQNVSSQLSICN 771
Query: 245 GKLEEKEKALQNAESE 292
+LE+ + N +SE
Sbjct: 772 SQLEQSNHIVDNLKSE 787
Score = 28.3 bits (60), Expect = 0.72
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Frame = +2
Query: 83 KDNALDRAAMCEQQAKDAN--LRAEKAEEEARQLQKKIQTIENELDQTQES 229
K ++L R A +Q+ + N L ++ AE EA +QK+I+++++ Q QES
Sbjct: 1425 KKSSLTRFAHLKQELTNKNKELTSKNAENEA--MQKEIESLKDSNHQLQES 1473
Score = 27.5 bits (58), Expect = 1.3
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Frame = +2
Query: 77 LEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQ----TIENELD---QTQESLM 235
LEKD + + QQ ++NLR + E +++K+ + + E E+ Q E M
Sbjct: 243 LEKDALQRKVSSLSQQFTESNLRYQNIVAELSEMRKQYEFSQVSFEKEISSQKQISELWM 302
Query: 236 QVNGKLEEKEKALQNAESEVAAL 304
+ + K LQN+ E+ L
Sbjct: 303 EKCEDCSLRLKELQNSNGELEKL 325
Score = 25.4 bits (53), Expect = 5.1
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +2
Query: 116 EQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQ 238
EQQ +++ + ++ E L+ + + +ENEL Q +E L +
Sbjct: 63 EQQLRNSEKKLLQSNERYDLLEDERKLLENELSQIKEYLRE 103
Score = 25.4 bits (53), Expect = 5.1
Identities = 14/63 (22%), Positives = 29/63 (46%)
Frame = +2
Query: 47 AIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQE 226
A+ ++ Q + A R E KD + E+E + L +++Q + +ELD +
Sbjct: 463 AMSEQYQKSLEDCQKAKSRYEQLETLFKDKCTENKHYEQETKDLARQVQVLLHELDLCEN 522
Query: 227 SLM 235
++
Sbjct: 523 GIV 525
>SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 324
Score = 32.3 bits (70), Expect = 0.044
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Frame = +2
Query: 53 KKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAE---EEARQLQKKIQTIENELDQTQ 223
++K ++ K+E+ + R E Q+K NLR + E ++ R LQ+KI +E +L Q
Sbjct: 17 QQKRKSKKMEELLSKQREECKELQSKITNLRKQLKEGNKKQKRALQQKISQMEADLSQKH 76
Query: 224 ESLMQVNGKLEEKEKALQNAE 286
+ Q K +E+ Q +
Sbjct: 77 ATERQKLDKGDEETNETQQED 97
>SPBC947.12 |kms2||spindle pole body protein
Kms2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 457
Score = 31.9 bits (69), Expect = 0.059
Identities = 16/82 (19%), Positives = 40/82 (48%)
Frame = +2
Query: 23 KNKTTKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIE 202
++K ++ + + + E D++ + C QAK + +A ++++ ++QTI
Sbjct: 185 RSKDEQVKELNARNAKLLEELDSSEEACKSCYTQAKTWEKKFREALRDSKEYAAQLQTIH 244
Query: 203 NELDQTQESLMQVNGKLEEKEK 268
E +Q Q ++++ + EK
Sbjct: 245 EEYEQQQAHIVRMEELIHAVEK 266
>SPAC20G8.10c ||SPAC3A12.01c|beclin family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 464
Score = 31.9 bits (69), Expect = 0.059
Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Frame = +2
Query: 44 DAIKKKMQAMKLEK------DNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIEN 205
+ + K ++A+K EK DN L + E+ + ++ ++ + ++KI+ I +
Sbjct: 152 EEMSKTLRALKEEKKMYFNYDNFLSSQTVHEENTAALDSEIDELMKQINEKEEKIEEISD 211
Query: 206 ELDQTQESLMQVNGKLEEKEKALQNAESEVAALN 307
E D+ Q+ L +++ EEKEK + LN
Sbjct: 212 ETDKLQKLLRELD---EEKEKVYAEEQEFYNNLN 242
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 31.9 bits (69), Expect = 0.059
Identities = 21/92 (22%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Frame = +2
Query: 23 KNKTTKMDAIKKKMQAMKLEKDN-----ALDRAAMCEQQAKDANL--RAEKAEEEARQLQ 181
KN +++++ K K +++ E++ A R+++ + N+ + + +E R+L+
Sbjct: 590 KNLESELNSSKIKNESLLNERNLLKEMLATSRSSILSHNSSAGNIDDKMKSIDESTRELE 649
Query: 182 KKIQTIENELDQTQESLMQVNGKLEEKEKALQ 277
K + NE+ QESL + N L + +A++
Sbjct: 650 KNYEVYRNEMTAIQESLSKRNQDLLSEMEAIR 681
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 31.9 bits (69), Expect = 0.059
Identities = 18/90 (20%), Positives = 45/90 (50%)
Frame = +2
Query: 32 TTKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENEL 211
T ++ ++ ++ ++ EKD+ + + +D + + E E RQLQ ++ + EL
Sbjct: 248 TERIRFLENALEKVQREKDS------LSTEMEEDKSNKEVDYEYEIRQLQNRLDELSEEL 301
Query: 212 DQTQESLMQVNGKLEEKEKALQNAESEVAA 301
D Q+ L + ++ ++ ++ E+ +A
Sbjct: 302 DVAQDLLTEKEDEIATLKRQIEEKENSSSA 331
Score = 24.6 bits (51), Expect = 8.9
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +2
Query: 128 KDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEV 295
+D L+ EEE L+ K+QT+E++ SL + L + ++L+ E+
Sbjct: 424 EDIMLQFRSLEEERDVLESKLQTLEDD----NNSLRLMTSSLGNQIESLRTQNREI 475
>SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 266
Score = 30.7 bits (66), Expect = 0.14
Identities = 12/51 (23%), Positives = 35/51 (68%)
Frame = +2
Query: 152 KAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVAAL 304
K +EE LQ ++ + NEL ++++ + ++ K + +++++++ ESE++++
Sbjct: 141 KLKEENENLQDMLRNVGNELVESRDEIKELIEKQKVQKESVKSHESELSSV 191
Score = 27.5 bits (58), Expect = 1.3
Identities = 15/78 (19%), Positives = 38/78 (48%)
Frame = +2
Query: 35 TKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELD 214
TK A KKK + K +K+N + ++ + ++++ + L +K++ +EN
Sbjct: 32 TKPPASKKKRKNRKKKKNNGPSEQFVGNNDLEEQRSGSIDSKDKEKPLDEKVKELENANK 91
Query: 215 QTQESLMQVNGKLEEKEK 268
+ + ++ + +E E+
Sbjct: 92 TLSDLVRRIQIQRDEAEQ 109
>SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 345
Score = 30.3 bits (65), Expect = 0.18
Identities = 17/80 (21%), Positives = 36/80 (45%)
Frame = +2
Query: 53 KKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESL 232
+KK + ++ K+N L+ + Q + + + A++ QK + E ++ E
Sbjct: 96 RKKRKELESAKNNLLNVYDSLKMQKASVSSMVNRKQRAAKEEQKIQEEFERQITDLLEEQ 155
Query: 233 MQVNGKLEEKEKALQNAESE 292
Q+ ++E E + A SE
Sbjct: 156 QQLKLEIERLEAETERANSE 175
>SPBC6B1.04 |mde4||monopolin-like complex subunit
Mde4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 29.9 bits (64), Expect = 0.24
Identities = 17/72 (23%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Frame = +2
Query: 23 KNKTTKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDAN---LRAEKAEEEARQLQKKIQ 193
K T + + K + +K ++ L+ + EQ+ +AN L+ E+ E + ++I
Sbjct: 54 KQSATDSELLHKNLDEIKFLQNEKLNNEKLLEQEQNEANDYRLKVERLEHKISDYVQEIN 113
Query: 194 TIENELDQTQES 229
++ ++L Q Q+S
Sbjct: 114 SLNSQL-QIQKS 124
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 29.5 bits (63), Expect = 0.31
Identities = 19/99 (19%), Positives = 39/99 (39%)
Frame = +2
Query: 176 LQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVAALNXXXXXXXXXXXXXXXX 355
L+ K + +EN+L+ E L + N E + ++ AE ALN
Sbjct: 748 LESKNKKLENDLNLLTEKLNKKNADTESFKNTIREAELSKKALNDNLGNKENIISDLKNK 807
Query: 356 XATATAKLSEASQAADESERARKVLENRSLADEERMDAL 472
+ + +L E ++ + + L R A + + ++
Sbjct: 808 LSEESTRLQELQSQLNQDKNQIETLNERISAAADELSSM 846
Score = 28.7 bits (61), Expect = 0.55
Identities = 18/84 (21%), Positives = 39/84 (46%)
Frame = +2
Query: 44 DAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQ 223
+A+ ++ ++++ + + ++ AEK EE Q+K+ + ELD T+
Sbjct: 620 EALDLSVKERSIQEEKLNESLKTSKTNLEEQTQLAEKYHEELLDNQQKLYDLRIELDYTK 679
Query: 224 ESLMQVNGKLEEKEKALQNAESEV 295
+ Q+ EE + + ESE+
Sbjct: 680 SNCKQME---EEMQVLREGHESEI 700
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 29.1 bits (62), Expect = 0.41
Identities = 18/93 (19%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Frame = +2
Query: 26 NKTTKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKD---ANLRAEKAEEEARQLQKKIQT 196
N T K + + K D ++ +C++QA+ +L + + E+ + + K Q
Sbjct: 452 NATRKKNGVYLAESTYKELMDRVQNKDLLCQEQARKLEVLDLNVKSSREQLQYVSKSNQE 511
Query: 197 IENELDQTQESLMQVNGKLEEKEKALQNAESEV 295
+ E++ Q L+ + +LE + + ++E+
Sbjct: 512 HKKEVEALQLQLVNSSTELESVKSENEKLKNEL 544
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 29.1 bits (62), Expect = 0.41
Identities = 22/84 (26%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +2
Query: 44 DAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEK-AEEEARQLQKKIQTIENELDQT 220
+A +K + +LE + R A EQ ++A +A++ AEE+A+ ++ + + E ++
Sbjct: 544 EAKRKAEEKARLEAEENAKREAE-EQAKREAEEKAKREAEEKAK--REAEEKAKREAEEN 600
Query: 221 QESLMQVNGKLEEKEKALQNAESE 292
+ + K E +EKA + AE +
Sbjct: 601 AKREAEEKAKREAEEKAKREAEEK 624
Score = 26.2 bits (55), Expect = 2.9
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +2
Query: 149 EKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESE 292
EKAE EA++ ++ +E E + +E+ + K E +EKA + AE +
Sbjct: 539 EKAEAEAKRKAEEKARLEAEENAKREA--EEQAKREAEEKAKREAEEK 584
Score = 25.4 bits (53), Expect = 5.1
Identities = 32/139 (23%), Positives = 56/139 (40%), Gaps = 5/139 (3%)
Frame = +2
Query: 56 KKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLM 235
++ A+KL + A E + K +AEE A++ ++ E E +E+
Sbjct: 524 QRKDAIKLAIQQRIQEKAEAEAKRKAEEKARLEAEENAKREAEEQAKREAEEKAKREAEE 583
Query: 236 QVNGKLEEKEK--ALQNA--ESEVAALNXXXXXXXXXXXXXXXXXATATAKLSEASQAAD 403
+ + EEK K A +NA E+E A A AK +A
Sbjct: 584 KAKREAEEKAKREAEENAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKR 643
Query: 404 ES-ERARKVLENRSLADEE 457
E+ E+A++ E ++ + E
Sbjct: 644 EAEEKAKREAEEKAKREAE 662
>SPCC18B5.07c |nup61||nucleoporin Nup61|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 565
Score = 28.7 bits (61), Expect = 0.55
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Frame = +2
Query: 134 ANLRAEKAEEEARQLQKKIQTIENELDQTQ--ESLMQVNGKLEEKEKALQNAESEV 295
A++ AEK+EE + + + + EN D+T+ +SL+ GK EE E ++ +++
Sbjct: 407 ASVGAEKSEETSNGNKSEQEEKENGNDETRSNDSLVSGKGKGEENEDSVFETRAKI 462
>SPBC19G7.16 |iws1||transcription elongation factor complex subunit
Iws1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 428
Score = 28.3 bits (60), Expect = 0.72
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Frame = +2
Query: 149 EKAEEEARQLQKKIQTIENE--LD---QTQESLMQVNGKLEEKEKALQNAESEVAALN 307
EKAE E Q++ + +T EN+ +D + V+ L+ KE+AL +E E++ L+
Sbjct: 5 EKAELENMQVESEAKTSENDQTIDTKVDVADVTTHVDEDLDNKEEALDFSEDELSDLD 62
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 27.9 bits (59), Expect = 0.95
Identities = 18/92 (19%), Positives = 38/92 (41%), Gaps = 7/92 (7%)
Frame = +2
Query: 50 IKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIE-------NE 208
++ A +E+ +D ++ + + K +++ +++Q + +E N+
Sbjct: 1978 LEASFAASDIERIKGIDECRNRDRTIRQLEAQISKFDDDKKRIQSSVSRLEERNAQLRNQ 2037
Query: 209 LDQTQESLMQVNGKLEEKEKALQNAESEVAAL 304
L+ Q S Q L E ALQ V +L
Sbjct: 2038 LEDVQASETQWKFALRRTEHALQEERERVKSL 2069
>SPCC162.06c |||vacuolar sorting protein Vps60|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 210
Score = 27.9 bits (59), Expect = 0.95
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Frame = +2
Query: 53 KKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKK-----IQTIENELDQ 217
+ ++Q ++ + N +++AAM + K+ + +E ARQL+ + I+ IE D+
Sbjct: 76 ESQLQQLQQQSFN-MEQAAMTTESLKNTMATVQTMQETARQLKSQSKNVSIEKIEKLQDE 134
Query: 218 TQESLMQVNGKLEE 259
Q+ M G+L E
Sbjct: 135 IQD-YMDAAGELNE 147
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 27.9 bits (59), Expect = 0.95
Identities = 13/62 (20%), Positives = 33/62 (53%)
Frame = +2
Query: 38 KMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQ 217
K++ + ++ +KLE+ NA + KD + + + +EE + +I ++E ++D+
Sbjct: 3323 KLEPLNSEVDRLKLEQKNAEECIQETIAACKDLDEKLLQLQEEYASMISEIHSMELQMDE 3382
Query: 218 TQ 223
+
Sbjct: 3383 VK 3384
>SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineurin
deletion Rnc1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 398
Score = 27.5 bits (58), Expect = 1.3
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 152 KAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKAL 274
K E R KI + D+T E + + G EE EKAL
Sbjct: 342 KISEIRRTSGSKISIAKEPHDETGERMFTITGTHEENEKAL 382
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 27.5 bits (58), Expect = 1.3
Identities = 17/92 (18%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Frame = +2
Query: 23 KNKTTKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEA--RQLQKKIQT 196
K K + + + + E ++ ++ E ++ + + ++EEE + +KK +
Sbjct: 78 KKKEESSSESESESSSSESESSSSESESSSSESESSSSESSSSESEEEVIVKTEEKKESS 137
Query: 197 IENELDQTQESLMQVNGKLEEKEKALQNAESE 292
E+ E + K+EEK+++ ++ SE
Sbjct: 138 SESSSSSESEEEEEAVVKIEEKKESSSDSSSE 169
>SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 27.1 bits (57), Expect = 1.7
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -2
Query: 416 RARIHRRPGWPRTAWRWRSRDAPRXSRGXPPAVGYVGSGQPLRTQ 282
RAR H RP R + R + + A G PP+ + SG R +
Sbjct: 81 RARQHERPFRSRKSRRRKGKKAFSPRPGSPPSPSFYRSGSQKRAR 125
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 26.6 bits (56), Expect = 2.2
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +2
Query: 164 EARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVAAL 304
E +LQK++QT+E E ++ +E L E+ L+ E+EV +L
Sbjct: 621 EFDELQKRLQTLEEENNKAKEDSTSKTSNLLEQ---LKMTEAEVDSL 664
>SPBC1347.04 |tim54||TIM22 inner membrane protein import complex
subunit Tim54|Schizosaccharomyces pombe|chr 2|||Manual
Length = 347
Score = 26.6 bits (56), Expect = 2.2
Identities = 19/73 (26%), Positives = 38/73 (52%)
Frame = +2
Query: 44 DAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQ 223
D +K+K++ KLE +N ++ E++ KD + +K + + KKI +NE+D +
Sbjct: 168 DIMKRKLETEKLEANNKEEKE---EKEGKDD--KDDKEDSNDTKNDKKIS--KNEVDSSL 220
Query: 224 ESLMQVNGKLEEK 262
+ G++ K
Sbjct: 221 IEASPLTGQVPPK 233
>SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regulator
protein Rif1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1400
Score = 26.2 bits (55), Expect = 2.9
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +2
Query: 74 KLEKDNALDRAAMCE----QQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQV 241
K DN + A++ E + K + A K + + KKI +NE +ESL
Sbjct: 1088 KPNNDNYIQIASVQELDDSSKGKAGKMPASKKNKRQKGDVKKIDETKNEATDMEESLTTP 1147
Query: 242 NGKLEEK 262
+GK+ ++
Sbjct: 1148 SGKVNKE 1154
>SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr
2|||Manual
Length = 207
Score = 26.2 bits (55), Expect = 2.9
Identities = 17/76 (22%), Positives = 37/76 (48%)
Frame = +2
Query: 29 KTTKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENE 208
K+ K D KKK A + EK + + EQ+A+ E+ E R +++++++ ++
Sbjct: 15 KSRKQDEEKKKKDAEEDEKWSKGVKTNKKEQEAEKRKAALERKAERERLEKEEMESLPSK 74
Query: 209 LDQTQESLMQVNGKLE 256
+ + + N L+
Sbjct: 75 GGKGSKKAAKKNSSLD 90
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 25.8 bits (54), Expect = 3.8
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +2
Query: 152 KAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQN 280
K E + Q K+ ENE+++ + + L+++EK L+N
Sbjct: 200 KREAALEEFQSKLLIRENEINKRELKMNGKEDDLKKREKDLEN 242
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 25.8 bits (54), Expect = 3.8
Identities = 13/61 (21%), Positives = 27/61 (44%)
Frame = +2
Query: 86 DNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKE 265
D ++ + +A RAE AE + ++++ ++ E E + +LEE E
Sbjct: 2 DKLREKINAARAETDEAVARAEAAEAKLKEVELQLSLKEQEYESLSRKSEAAESQLEELE 61
Query: 266 K 268
+
Sbjct: 62 E 62
>SPAC4F10.17 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 123
Score = 25.8 bits (54), Expect = 3.8
Identities = 14/60 (23%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +2
Query: 86 DNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKI-QTIENELDQTQESLMQVNGKLEEK 262
+NA + AKD + + +KA++ ++++++ Q EN L++T+ M +G ++++
Sbjct: 65 ENAKQSVKQTAKDAKDTDYQ-QKAKDAGKKIKEEFSQRSENVLEETRREGMNRDGGVKKE 123
>SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering
component Pep7 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 536
Score = 25.8 bits (54), Expect = 3.8
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +2
Query: 161 EEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVAA 301
E R+L+KK + +E + QE LMQ LEE+ ++N + A
Sbjct: 458 ESERELEKKKEQVEKK----QEELMQTRIVLEEQVFLVENMIEDAKA 500
>SPBC1709.02c |vas2|SPBC1734.18c|valine-tRNA ligase Vas2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 980
Score = 25.8 bits (54), Expect = 3.8
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +2
Query: 74 KLEKDNALDRAAMCEQQAKDANLRAEKAEEEAR--QLQKK 187
K EK+ +R + + A L A+KA+EEAR +L KK
Sbjct: 25 KTEKELERERQKAAKLEKYHAKLAAKKAKEEARKPKLDKK 64
>SPBC16G5.11c |bag101|bag1-a, bag1|BAG family molecular chaperone
regulator|Schizosaccharomyces pombe|chr 2|||Manual
Length = 195
Score = 25.8 bits (54), Expect = 3.8
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 140 LRAEKAEEEARQLQKKIQTIENELDQTQESL 232
L +EK E +QL KIQ + + +DQT + +
Sbjct: 163 LGSEKLRFERKQLVSKIQKMLDHVDQTSQEV 193
>SPBC947.07 |||ribosome biogenesis protein
Rrp14-C|Schizosaccharomyces pombe|chr 2|||Manual
Length = 233
Score = 25.8 bits (54), Expect = 3.8
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 53 KKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQ 175
KK A K KDN +A + QQ ++ NL+ + +++++
Sbjct: 181 KKSSDAWKERKDNE-KKAMLMRQQRREENLKKRRESKKSKK 220
>SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3
Brl1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 692
Score = 25.4 bits (53), Expect = 5.1
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +2
Query: 80 EKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEE 259
E +N LD E++ A+ EK + L+ ++ ++ DQ+Q L++ +LE
Sbjct: 419 EMNNVLD-----EKEEISASSALEKLIKNNSCLEAELPSMYAAFDQSQSRLLKKYEELET 473
Query: 260 KEK 268
KEK
Sbjct: 474 KEK 476
>SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit
Smc6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1140
Score = 25.4 bits (53), Expect = 5.1
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +2
Query: 182 KKIQTIENELDQTQESLMQVNGKLEE 259
+KIQT+E + +T++ L G+L++
Sbjct: 785 EKIQTLERRISETEKELESYAGQLQD 810
>SPBC21D10.10 |||bromodomain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 299
Score = 25.4 bits (53), Expect = 5.1
Identities = 11/44 (25%), Positives = 26/44 (59%)
Frame = +2
Query: 161 EEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESE 292
EE + +KK++++ E+ + + ++ LEE +K + A++E
Sbjct: 94 EEIQGCEKKLESLYEEVAKAKAKAVEDQLALEEADKEAKKAKTE 137
>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
Ino80|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1604
Score = 25.4 bits (53), Expect = 5.1
Identities = 29/132 (21%), Positives = 56/132 (42%), Gaps = 2/132 (1%)
Frame = +2
Query: 26 NKTTKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIEN 205
NK + A + + M K N + ++ ++A RA+K EEE R+ +++ + ++
Sbjct: 675 NKDMQTKAKRAMRETMVFWKRNERVERDLRKKAEREALDRAKK-EEELRESRRQARKLDF 733
Query: 206 ELDQTQESLMQVNGKLEEKEKALQNA--ESEVAALNXXXXXXXXXXXXXXXXXATATAKL 379
+ QT E G+ ++E+ L +A + V+ +N A K
Sbjct: 734 LITQT-ELYSHFVGRKMDREQDLPSATNTASVSEINFDSDEEEDIRRLAVESAQEAVQKA 792
Query: 380 SEASQAADESER 415
E SQ D + +
Sbjct: 793 REHSQLFDANRQ 804
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 25.0 bits (52), Expect = 6.7
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = +2
Query: 116 EQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEV 295
E D + + E E +LQ+K+ + + Q L V +LEE+ + Q EV
Sbjct: 65 ENLKNDLKRKELEFEREQIELQRKLAEEHEQKNSLQLRLTLVEKQLEEQSTSYQKEIEEV 124
>SPBC31F10.04c |srb4|med17|mediator complex subunit
Srb4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 545
Score = 25.0 bits (52), Expect = 6.7
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +2
Query: 110 MCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEE-KEKALQ 277
M E+ KDA++ + + + + +EN L Q + ++Q G + KE+ LQ
Sbjct: 1 MAEEANKDADISSLSLSLDPEIIGGQNNFLENNLQQIFQKIIQERGPFRDLKEEDLQ 57
>SPBC14F5.07 |||ER-localized ubiquitin ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1242
Score = 25.0 bits (52), Expect = 6.7
Identities = 21/76 (27%), Positives = 34/76 (44%)
Frame = +2
Query: 50 IKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQES 229
+ ++Q + E N ++A A+ NLR + EARQ + E + +
Sbjct: 192 VADELQGQQFENVNQNNQAQAAAAAAQ--NLREVR---EARQRLAMVMEHLRERQEQRNL 246
Query: 230 LMQVNGKLEEKEKALQ 277
+Q NG EE E+A Q
Sbjct: 247 ELQRNGSFEEIERARQ 262
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 25.0 bits (52), Expect = 6.7
Identities = 19/99 (19%), Positives = 39/99 (39%), Gaps = 7/99 (7%)
Frame = +2
Query: 23 KNKTTKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIE 202
++ + +K K+ ++ D L +A + + E+ E L+ + ++
Sbjct: 527 RDVAANLSDVKAKVSEIRKAYDEELAKAKQISLDIETNKAQTEQVNREYSILEATLNALQ 586
Query: 203 NELDQTQESLMQV-------NGKLEEKEKALQNAESEVA 298
+ Q E L QV +E ++Q +SEVA
Sbjct: 587 KQNKQKGEVLEQVVAESEAAKNMVESSNASIQQLKSEVA 625
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 24.6 bits (51), Expect = 8.9
Identities = 14/62 (22%), Positives = 27/62 (43%)
Frame = +2
Query: 119 QQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVA 298
++ +D +R + R L ++QT+ + + S+ N LEE+ LQ +
Sbjct: 282 KKIEDERMRQMSVSSD-RTLDSQLQTVNENITRISTSIELKNTALEEEHGDLQQIRGKAK 340
Query: 299 AL 304
L
Sbjct: 341 EL 342
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 24.6 bits (51), Expect = 8.9
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3
Query: 432 RTGRWRMKSAWTPS 473
R+G W KS+W PS
Sbjct: 301 RSGNWYTKSSWCPS 314
>SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 24.6 bits (51), Expect = 8.9
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +2
Query: 128 KDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEE 259
K A +A +A + + + + T + +DQ QE++ + LEE
Sbjct: 5 KSAAKKAREALVQKKVINSNVPTDKKSIDQLQENVTSKSHLLEE 48
>SPBC14F5.11c |mug186||sorting nexin Snx41|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 586
Score = 24.6 bits (51), Expect = 8.9
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2
Query: 194 SGSSSEAVSPLLRPSQHEG 138
S SS+ V P + PSQH+G
Sbjct: 17 SASSAVNVEPKVEPSQHQG 35
>SPBC3E7.05c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 550
Score = 24.6 bits (51), Expect = 8.9
Identities = 17/71 (23%), Positives = 35/71 (49%)
Frame = +2
Query: 65 QAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVN 244
QA+ LEK + A EQ+ R ++ +QLQ+ ++ + +E + L+ V+
Sbjct: 317 QAITLEKLHLQSIKAQVEQERGSRLGRLQELRNSFQQLQELVRVVLHENGRVTR-LVDVS 375
Query: 245 GKLEEKEKALQ 277
L++ K ++
Sbjct: 376 NTLDDLNKDMR 386
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,371,910
Number of Sequences: 5004
Number of extensions: 20322
Number of successful extensions: 179
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 176
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 208287218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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