Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32300
         (516 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    36   8e-04
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    32   0.010
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    30   0.053
AY846632-1|AAW31598.1|  412|Anopheles gambiae SAGLIN protein.          26   0.87 
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    25   1.1  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    25   1.5  
AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative acetyltr...    24   2.6  
AY187044-1|AAO39758.1|   87|Anopheles gambiae putative antennal ...    23   4.6  
AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     23   4.6  
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    23   6.1  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    23   8.1  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    23   8.1  

>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 35.9 bits (79), Expect = 8e-04
 Identities = 28/129 (21%), Positives = 54/129 (41%), Gaps = 4/129 (3%)
 Frame = +2

Query: 56   KKMQAMKLEKDNALDRAA--MCEQQAKDANLRAEKAEEEA--RQLQKKIQTIENELDQTQ 223
            KK+Q   L  +  L + A  + E + ++  LR E         +LQK I+  + +LDQ +
Sbjct: 754  KKLQQELLTNEQQLQQLAGVVFEGETEETTLREELEHSRTILAKLQKGIEEEQAKLDQVR 813

Query: 224  ESLMQVNGKLEEKEKALQNAESEVAALNXXXXXXXXXXXXXXXXXATATAKLSEASQAAD 403
             ++ Q     + K+ A+   E+E+A +                        L  ++++ +
Sbjct: 814  RTVQQEEQTAQAKKDAMGAVEAEIARIQASIDKEQQARHDLQTNHKVKQQALKRSTESME 873

Query: 404  ESERARKVL 430
            E +R R  L
Sbjct: 874  ERKRTRVAL 882



 Score = 26.2 bits (55), Expect = 0.66
 Identities = 21/97 (21%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
 Frame = +2

Query: 23  KNKTTKMDAIKKKMQAMKLEKD-NALDRAAMCEQQAKDANLRAEKAEEEAR--QLQKKIQ 193
           +N + ++  I+K   A ++E+D    +R  + + + +   +  EKA+ + R  +L   I 
Sbjct: 406 RNASERVTRIQK--DARQIEQDLQERNRDGLSQVEQRKQAVETEKAQLKERNDELASMIA 463

Query: 194 TIENELDQTQESLMQVNGKLEEKEKALQNAESEVAAL 304
           + + E+D    ++  V    EEK       +SE   +
Sbjct: 464 SAQREVDLMYNTMAHVKDAREEKHHERCAKQSETTRI 500


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 32.3 bits (70), Expect = 0.010
 Identities = 21/84 (25%), Positives = 41/84 (48%)
 Frame = +2

Query: 44   DAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQ 223
            D +++  +A+     NA D A    Q A+D    AE+A + A  ++K+    +N      
Sbjct: 1417 DLLQRAEEALYAASRNAED-ARKNAQTAQDKY--AEEASKLAENIKKRANATKNTARDLH 1473

Query: 224  ESLMQVNGKLEEKEKALQNAESEV 295
                Q+NG+L + +  L+  E+++
Sbjct: 1474 HEADQLNGRLAKTDNRLEEREAQI 1497


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 29.9 bits (64), Expect = 0.053
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = +2

Query: 164 EARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVAALN 307
           E    ++K+Q   NE  +  ++L  V GKL+E   A+Q+  S+   L+
Sbjct: 542 ELETAKQKLQENANEERELTQTLRAVQGKLQESMAAMQSTRSQGKVLD 589



 Score = 29.1 bits (62), Expect = 0.093
 Identities = 12/61 (19%), Positives = 37/61 (60%)
 Frame = +2

Query: 50   IKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQES 229
            ++++++ MKL  + A + ++  +++      R  + + +  + ++ +QTIE +L +T+++
Sbjct: 968  LREELEEMKLAIEKAHEGSSSIKKEIVALQKREAEGKMKRLEFEQILQTIETKLQETKDT 1027

Query: 230  L 232
            L
Sbjct: 1028 L 1028



 Score = 28.3 bits (60), Expect = 0.16
 Identities = 16/83 (19%), Positives = 36/83 (43%)
 Frame = +2

Query: 35   TKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELD 214
            TK++ + K++  +              E+  + +  +    E+E    Q  I+   +E  
Sbjct: 900  TKINGLGKQIDKLSANISKLTVEIKTSERNVQKSKDKINSMEDEVEAAQSAIRKGNDERT 959

Query: 215  QTQESLMQVNGKLEEKEKALQNA 283
            Q +E   ++  +LEE + A++ A
Sbjct: 960  QLEEEANKLREELEEMKLAIEKA 982


>AY846632-1|AAW31598.1|  412|Anopheles gambiae SAGLIN protein.
          Length = 412

 Score = 25.8 bits (54), Expect = 0.87
 Identities = 14/57 (24%), Positives = 28/57 (49%)
 Frame = +2

Query: 104 AAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKAL 274
           AA  E+Q   A    ++ +E  + LQK++  + +  +     L+  N  + E ++AL
Sbjct: 116 AATLEEQLHAAQQETQQEQEMKKALQKQLDALTDSRNALYIDLLLANIAIGETKQAL 172


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
 Frame = +2

Query: 56   KKMQAMKLEKDNALDRAAMC-----EQQAKDANLRAEKAEEEARQLQKKIQTIENELDQT 220
            KK+Q  K +    +++ AM      E+Q K+   R +  E++    +KKIQ I  +LD+ 
Sbjct: 968  KKLQDSKDKMSRNVNQKAMVLLEREEEQYKEVMRRKKVVEDD----KKKIQAIITDLDEE 1023

Query: 221  QESLMQV 241
            ++  ++V
Sbjct: 1024 KKKKLKV 1030



 Score = 23.8 bits (49), Expect = 3.5
 Identities = 16/100 (16%), Positives = 43/100 (43%), Gaps = 11/100 (11%)
 Frame = +2

Query: 38   KMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRA-----------EKAEEEARQLQK 184
            +++ + KK++ ++     A +    C  + KD   +            + AEE+ ++ +K
Sbjct: 742  EIEELNKKIETLQKTIVEARETQTQCSAKVKDLQAKIADGKGHRERELKSAEEDLKRSKK 801

Query: 185  KIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVAAL 304
            K +       + ++    +  ++EE +K +  A+ +   L
Sbjct: 802  KSEESRKNWKKHEQDFETLKLEIEELQKGIVTAKEQAVKL 841


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +1

Query: 157  RRRGETASEEDPDN*KRARPDTGVSHAG*RKARREGEGS 273
            R+R   + EED D  +R       S +G R   R G GS
Sbjct: 1047 RKRRIASDEEDSDGSQRRSRSRSRSGSGSRSRSRSGSGS 1085



 Score = 24.2 bits (50), Expect = 2.6
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +2

Query: 119 QQAKDANLRAEKAEEEARQLQKKIQTIENE 208
           QQA+    RA K +EE R L++K Q +E E
Sbjct: 821 QQAQYHVSRARKIDEEERSLRQK-QELERE 849


>AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative
           acetyltransferase protein.
          Length = 471

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = -2

Query: 449 PPTTCSRAPYVRARIHRRPGWPRTAWRWRSRDAPR 345
           PP   S  PY+   IHR P       R  + + PR
Sbjct: 230 PPPPTSNEPYLVVPIHRHPELKEQCVRLINTEWPR 264


>AY187044-1|AAO39758.1|   87|Anopheles gambiae putative antennal
           carrier protein AP-2 protein.
          Length = 87

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
 Frame = +2

Query: 29  KTTKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAE----KAEEEARQLQKKI 190
           K    DA  K      L     LD+ A+     KDA  + E    KA+++A ++ KK+
Sbjct: 24  KDAAKDATDKVKDKAALPDAPKLDKDAVTTPDPKDAAKKVEDAAGKAKDQAAEVGKKL 81


>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 4/34 (11%)
 Frame = -2

Query: 512 PPQRGTWLXSXDSXGRPCALHP----PTTCSRAP 423
           PP R  W       GRP  L P    PTT + AP
Sbjct: 90  PPFRPPWHPRPPFGGRPWWLRPPFHRPTTSTAAP 123


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -3

Query: 139 VGVFGLLLTHGSAVERI 89
           V +FG+LLTHG  + ++
Sbjct: 527 VSLFGVLLTHGYLIMQV 543


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +1

Query: 307 PTYPTAGGXPREXRGASRDR 366
           PT PT  G PR    +S  R
Sbjct: 60  PTLPTTSGEPRAAGSSSNSR 79


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +1

Query: 307 PTYPTAGGXPREXRGASRDR 366
           PT PT  G PR    +S  R
Sbjct: 60  PTLPTTSGEPRAAGSSSNSR 79


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 357,046
Number of Sequences: 2352
Number of extensions: 6033
Number of successful extensions: 25
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)