Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32299
         (516 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   4.6  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   6.1  
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    23   8.1  
AJ821850-1|CAH25390.1|  426|Anopheles gambiae alpha-2,6-sialyltr...    23   8.1  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   8.1  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = +1

Query: 346  PVKDHRRT*NYW*KTWVHT*TPTPPGNKQFFTQNASLMT 462
            P   HRR    +   W     P P G+KQ +  N + M+
Sbjct: 1633 PEPSHRRNHTLFGNVWSSIRRPGPFGSKQKWNSNNNKMS 1671


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -2

Query: 137 RTYLIALAGNYSQSGCYFQHFCCDLY 60
           RT ++ LAG    +GC  +  C +L+
Sbjct: 184 RTRILGLAGPLHGAGCTPERLCWELH 209


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -3

Query: 406 FKCAPMFSTSSSKSVCDLL 350
           F  +P FS S + ++CD++
Sbjct: 256 FFASPQFSASMNDTICDIV 274


>AJ821850-1|CAH25390.1|  426|Anopheles gambiae
           alpha-2,6-sialyltransferase protein.
          Length = 426

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 174 LLMPVCMQLRLLTYVP 127
           LL+PVC  + ++ Y+P
Sbjct: 350 LLLPVCRYIDVVEYIP 365


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +1

Query: 313 LISLNTWLLKVPVKDHRRT*NYW 381
           L+  N WLL   + D R   N W
Sbjct: 900 LVEFNVWLLPKQLNDIRLAFNAW 922


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 567,923
Number of Sequences: 2352
Number of extensions: 12087
Number of successful extensions: 63
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)