Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32298
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039041-9|AAB94188.2| 194|Caenorhabditis elegans Troponin i pr... 53 1e-07
AB107583-1|BAD89381.1| 194|Caenorhabditis elegans troponin I 4 ... 53 1e-07
U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated p... 48 3e-06
AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2 ... 48 3e-06
Z81593-2|CAB04737.1| 260|Caenorhabditis elegans Hypothetical pr... 47 9e-06
AB107359-1|BAD89380.1| 260|Caenorhabditis elegans troponin I 3 ... 47 9e-06
Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical pr... 40 8e-04
AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1 ... 40 8e-04
U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t prot... 39 0.002
U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t pro... 36 0.017
U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t pro... 36 0.017
AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t pr... 35 0.040
AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t pr... 35 0.040
U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t prot... 33 0.092
U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T prot... 32 0.28
U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle position... 32 0.28
AL110478-10|CAE17956.3| 758|Caenorhabditis elegans Hypothetical... 27 6.0
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 27 8.0
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 27 8.0
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 27 8.0
>AF039041-9|AAB94188.2| 194|Caenorhabditis elegans Troponin i
protein 4 protein.
Length = 194
Score = 53.2 bits (122), Expect = 1e-07
Identities = 35/117 (29%), Positives = 50/117 (42%)
Frame = +2
Query: 164 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 343
+RK+ EVRKR+EEAS GF+TP
Sbjct: 16 ERKKEEVRKRLEEASRMKKAKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQRIL 75
Query: 344 XXXCGKPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVXRKDMEISDLNSQV 514
++D NED ++ V + ER+ LE E +D+ YIV +KD EI++L V
Sbjct: 76 QERIIPLPDLD--NEDDLEAVYDEIRERLIDLESENYDVSYIVRQKDFEINELTIAV 130
>AB107583-1|BAD89381.1| 194|Caenorhabditis elegans troponin I 4
protein.
Length = 194
Score = 53.2 bits (122), Expect = 1e-07
Identities = 35/117 (29%), Positives = 50/117 (42%)
Frame = +2
Query: 164 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 343
+RK+ EVRKR+EEAS GF+TP
Sbjct: 16 ERKKEEVRKRLEEASRMKKAKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQRIL 75
Query: 344 XXXCGKPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVXRKDMEISDLNSQV 514
++D NED ++ V + ER+ LE E +D+ YIV +KD EI++L V
Sbjct: 76 QERIIPLPDLD--NEDDLEAVYDEIRERLIDLESENYDVSYIVRQKDFEINELTIAV 130
>U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated
protein 27 protein.
Length = 242
Score = 48.4 bits (110), Expect = 3e-06
Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 1/118 (0%)
Frame = +2
Query: 164 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 343
+ K+AEVRKR+EEA GF+TP
Sbjct: 17 EAKKAEVRKRLEEAGNKKKAKKGFLTPERKKKLRKLLMVKAAEDLKRQQLLKEQERQKAL 76
Query: 344 XXXCGKPKNIDDANED-TIKRVCKDYHERIARLEDEKFDLEYIVXRKDMEISDLNSQV 514
N+D ++ ++++ D R+ +LE+EK+D+ Y+V + + EI+ L +V
Sbjct: 77 ADRTISLPNVDSIDDKGQLEKIYNDLWARLTQLEEEKYDINYVVSQTEAEINSLTIEV 134
>AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2
protein.
Length = 242
Score = 48.4 bits (110), Expect = 3e-06
Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 1/118 (0%)
Frame = +2
Query: 164 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 343
+ K+AEVRKR+EEA GF+TP
Sbjct: 17 EAKKAEVRKRLEEAGNKKKAKKGFLTPERKKKLRKLLMVKAAEDLKRQQLLKEQERQKAL 76
Query: 344 XXXCGKPKNIDDANED-TIKRVCKDYHERIARLEDEKFDLEYIVXRKDMEISDLNSQV 514
N+D ++ ++++ D R+ +LE+EK+D+ Y+V + + EI+ L +V
Sbjct: 77 ADRTISLPNVDSIDDKGQLEKIYNDLWARLTQLEEEKYDINYVVSQTEAEINSLTIEV 134
>Z81593-2|CAB04737.1| 260|Caenorhabditis elegans Hypothetical
protein T20B3.2 protein.
Length = 260
Score = 46.8 bits (106), Expect = 9e-06
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 1/116 (0%)
Frame = +2
Query: 170 KRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 349
K+AEVRKRMEEA+ GF+TP
Sbjct: 31 KKAEVRKRMEEAAKKGSKKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQKTLQQ 90
Query: 350 XCGKPKNIDDANED-TIKRVCKDYHERIARLEDEKFDLEYIVXRKDMEISDLNSQV 514
++D N+ + ++ +D R+ LE+EKFD+ + V + + EI+ L QV
Sbjct: 91 RTIPLPDVDSINDQGQLLKIYEDMFARVCALEEEKFDINFGVSQTEAEINQLTIQV 146
>AB107359-1|BAD89380.1| 260|Caenorhabditis elegans troponin I 3
protein.
Length = 260
Score = 46.8 bits (106), Expect = 9e-06
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 1/116 (0%)
Frame = +2
Query: 170 KRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 349
K+AEVRKRMEEA+ GF+TP
Sbjct: 31 KKAEVRKRMEEAAKKGSKKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQKTLQQ 90
Query: 350 XCGKPKNIDDANED-TIKRVCKDYHERIARLEDEKFDLEYIVXRKDMEISDLNSQV 514
++D N+ + ++ +D R+ LE+EKFD+ + V + + EI+ L QV
Sbjct: 91 RTIPLPDVDSINDQGQLLKIYEDMFARVCALEEEKFDINFGVSQTEAEINQLTIQV 146
>Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical
protein F42E11.4 protein.
Length = 250
Score = 40.3 bits (90), Expect = 8e-04
Identities = 28/118 (23%), Positives = 46/118 (38%), Gaps = 1/118 (0%)
Frame = +2
Query: 164 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 343
+ K+AEVRKR+EEA GF+TP
Sbjct: 30 EAKKAEVRKRLEEAGQKKQKK-GFLTPERKKKLRKLLMNKAAEDLKTQQLRKEQERVKVL 88
Query: 344 XXXCGKPKNIDDANEDT-IKRVCKDYHERIARLEDEKFDLEYIVXRKDMEISDLNSQV 514
N+D ++ ++ + D R+ LE+EK+D+ +I + I+ LN +V
Sbjct: 89 AERTVALPNVDSIDDHAKLEAIYNDLFSRLCNLEEEKYDINHITTETETTINQLNIEV 146
>AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1
protein.
Length = 250
Score = 40.3 bits (90), Expect = 8e-04
Identities = 28/118 (23%), Positives = 46/118 (38%), Gaps = 1/118 (0%)
Frame = +2
Query: 164 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 343
+ K+AEVRKR+EEA GF+TP
Sbjct: 30 EAKKAEVRKRLEEAGQKKQKK-GFLTPERKKKLRKLLMNKAAEDLKTQQLRKEQERVKVL 88
Query: 344 XXXCGKPKNIDDANEDT-IKRVCKDYHERIARLEDEKFDLEYIVXRKDMEISDLNSQV 514
N+D ++ ++ + D R+ LE+EK+D+ +I + I+ LN +V
Sbjct: 89 AERTVALPNVDSIDDHAKLEAIYNDLFSRLCNLEEEKYDINHITTETETTINQLNIEV 146
>U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t protein
3, isoform b protein.
Length = 1178
Score = 38.7 bits (86), Expect = 0.002
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +2
Query: 368 NIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVXRKDMEISDLNSQ 511
N + + +K K+ H+RI +LE EK+DLE R++ ++ +LN +
Sbjct: 1043 NASEVPQSELKAKIKELHQRICKLETEKYDLEKRHERQEYDMKELNER 1090
>U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t
protein 2, isoform b protein.
Length = 324
Score = 35.9 bits (79), Expect = 0.017
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = +2
Query: 359 KPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVXRKDMEISDLNSQ 511
K +++ + +K K H RI +LE EK+DLE R++ ++ +LN +
Sbjct: 125 KAQDVSTLMPNDLKERIKGIHARIVKLEGEKYDLEKRRERQEYDLKELNER 175
>U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t
protein 2, isoform a protein.
Length = 428
Score = 35.9 bits (79), Expect = 0.017
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = +2
Query: 359 KPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVXRKDMEISDLNSQ 511
K +++ + +K K H RI +LE EK+DLE R++ ++ +LN +
Sbjct: 229 KAQDVSTLMPNDLKERIKGIHARIVKLEGEKYDLEKRRERQEYDLKELNER 279
>AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t
protein 4, isoform b protein.
Length = 308
Score = 34.7 bits (76), Expect = 0.040
Identities = 14/39 (35%), Positives = 26/39 (66%)
Frame = +2
Query: 395 IKRVCKDYHERIARLEDEKFDLEYIVXRKDMEISDLNSQ 511
+K K+ H+RI +LE +K+DLE R++ ++ +LN +
Sbjct: 216 MKAKIKELHQRICKLEAQKYDLEKRHERQEYDLKELNER 254
>AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t
protein 4, isoform a protein.
Length = 347
Score = 34.7 bits (76), Expect = 0.040
Identities = 14/39 (35%), Positives = 26/39 (66%)
Frame = +2
Query: 395 IKRVCKDYHERIARLEDEKFDLEYIVXRKDMEISDLNSQ 511
+K K+ H+RI +LE +K+DLE R++ ++ +LN +
Sbjct: 216 MKAKIKELHQRICKLEAQKYDLEKRHERQEYDLKELNER 254
>U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t protein
3, isoform a protein.
Length = 350
Score = 33.5 bits (73), Expect = 0.092
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 368 NIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVXRKDMEISDL 502
N + + +K K+ H+RI +LE EK+DLE R++ + L
Sbjct: 209 NASEVPQSELKAKIKELHQRICKLETEKYDLEKRHERQEYDPKQL 253
>U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T
protein.
Length = 405
Score = 31.9 bits (69), Expect = 0.28
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +2
Query: 395 IKRVCKDYHERIARLEDEKFDLEYIVXRKDMEISDLNSQ 511
+K + H RI +LE EK+DLE R+D ++ +L+ +
Sbjct: 232 LKERIRGLHARIVKLEAEKYDLEKRRERQDYDMKELHER 270
>U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle positioning
protein 2 protein.
Length = 405
Score = 31.9 bits (69), Expect = 0.28
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +2
Query: 395 IKRVCKDYHERIARLEDEKFDLEYIVXRKDMEISDLNSQ 511
+K + H RI +LE EK+DLE R+D ++ +L+ +
Sbjct: 232 LKERIRGLHARIVKLEAEKYDLEKRRERQDYDMKELHER 270
>AL110478-10|CAE17956.3| 758|Caenorhabditis elegans Hypothetical
protein Y26D4A.13 protein.
Length = 758
Score = 27.5 bits (58), Expect = 6.0
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +2
Query: 386 EDTIKRVCKDYHERIARLEDEKFDLEY 466
ED + R+C+ Y + + R+ + + +LEY
Sbjct: 671 EDVVNRLCESYKKLLVRVAELETELEY 697
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 374 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIVXRKDMEISDL 502
D+ E I+ V + + RLE+EK DLE + + E+S +
Sbjct: 1072 DELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQI 1114
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 374 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIVXRKDMEISDL 502
D+ E I+ V + + RLE+EK DLE + + E+S +
Sbjct: 1145 DELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQI 1187
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 374 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIVXRKDMEISDL 502
D+ E I+ V + + RLE+EK DLE + + E+S +
Sbjct: 1145 DELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQI 1187
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,274,798
Number of Sequences: 27780
Number of extensions: 116846
Number of successful extensions: 435
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 435
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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