Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32289
(358 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 153 5e-38
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 153 5e-38
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 153 5e-38
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 153 5e-38
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 98 1e-21
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 98 1e-21
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 83 7e-17
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 81 3e-16
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 51 2e-07
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 51 2e-07
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 51 2e-07
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 51 2e-07
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 51 2e-07
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 42 1e-04
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 39 9e-04
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 35 0.015
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 33 0.059
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 33 0.059
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 31 0.24
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 31 0.24
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 1.3
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 1.3
Z74473-4|CAA98953.1| 390|Caenorhabditis elegans Hypothetical pr... 28 1.7
Z72505-6|CAA96613.2| 358|Caenorhabditis elegans Hypothetical pr... 28 1.7
AF216966-1|AAF23508.1| 358|Caenorhabditis elegans seven transme... 28 1.7
U58760-5|AAK31464.1| 1076|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 27 5.1
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 27 5.1
Z73973-4|CAE54908.1| 367|Caenorhabditis elegans Hypothetical pr... 26 6.7
Z73973-3|CAA98265.1| 468|Caenorhabditis elegans Hypothetical pr... 26 6.7
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 26 6.7
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 26 6.7
AF026213-6|AAB71307.1| 655|Caenorhabditis elegans Temporarily a... 26 8.9
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 153 bits (370), Expect = 5e-38
Identities = 70/73 (95%), Positives = 72/73 (98%)
Frame = +1
Query: 139 KRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGH 318
KRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGH
Sbjct: 36 KRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGH 95
Query: 319 RDFIKNMITXTSQ 357
RDFIKNMIT TSQ
Sbjct: 96 RDFIKNMITGTSQ 108
Score = 82.6 bits (195), Expect = 7e-17
Identities = 39/53 (73%), Positives = 43/53 (81%), Gaps = 4/53 (7%)
Frame = +3
Query: 33 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK----TYHREVREGGPGN 179
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDK + +E +E G G+
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGS 53
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 153 bits (370), Expect = 5e-38
Identities = 70/73 (95%), Positives = 72/73 (98%)
Frame = +1
Query: 139 KRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGH 318
KRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGH
Sbjct: 36 KRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGH 95
Query: 319 RDFIKNMITXTSQ 357
RDFIKNMIT TSQ
Sbjct: 96 RDFIKNMITGTSQ 108
Score = 82.6 bits (195), Expect = 7e-17
Identities = 39/53 (73%), Positives = 43/53 (81%), Gaps = 4/53 (7%)
Frame = +3
Query: 33 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK----TYHREVREGGPGN 179
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDK + +E +E G G+
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGS 53
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 153 bits (370), Expect = 5e-38
Identities = 70/73 (95%), Positives = 72/73 (98%)
Frame = +1
Query: 139 KRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGH 318
KRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGH
Sbjct: 36 KRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGH 95
Query: 319 RDFIKNMITXTSQ 357
RDFIKNMIT TSQ
Sbjct: 96 RDFIKNMITGTSQ 108
Score = 82.6 bits (195), Expect = 7e-17
Identities = 39/53 (73%), Positives = 43/53 (81%), Gaps = 4/53 (7%)
Frame = +3
Query: 33 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK----TYHREVREGGPGN 179
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDK + +E +E G G+
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGS 53
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 153 bits (370), Expect = 5e-38
Identities = 70/73 (95%), Positives = 72/73 (98%)
Frame = +1
Query: 139 KRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGH 318
KRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGH
Sbjct: 36 KRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGH 95
Query: 319 RDFIKNMITXTSQ 357
RDFIKNMIT TSQ
Sbjct: 96 RDFIKNMITGTSQ 108
Score = 82.6 bits (195), Expect = 7e-17
Identities = 39/53 (73%), Positives = 43/53 (81%), Gaps = 4/53 (7%)
Frame = +3
Query: 33 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK----TYHREVREGGPGN 179
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDK + +E +E G G+
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGS 53
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 98.3 bits (234), Expect = 1e-21
Identities = 44/72 (61%), Positives = 54/72 (75%)
Frame = +1
Query: 142 RTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHR 321
RTI+KF+ EA GK SF YAWVLD+ + ERERG+T+DI FETS + ++DAPGH+
Sbjct: 200 RTIDKFKHEAARNGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHK 259
Query: 322 DFIKNMITXTSQ 357
DFI NMIT TSQ
Sbjct: 260 DFISNMITGTSQ 271
Score = 41.9 bits (94), Expect = 1e-04
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Frame = +3
Query: 42 EKTHINIVVIGHVDSGKSTTTGHLIY-----KCGGIDKTYHREVREG 167
+K IN++V+GHVD+GKST GHL++ IDK H R G
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNG 213
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 98.3 bits (234), Expect = 1e-21
Identities = 44/72 (61%), Positives = 54/72 (75%)
Frame = +1
Query: 142 RTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHR 321
RTI+KF+ EA GK SF YAWVLD+ + ERERG+T+DI FETS + ++DAPGH+
Sbjct: 218 RTIDKFKHEAARNGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHK 277
Query: 322 DFIKNMITXTSQ 357
DFI NMIT TSQ
Sbjct: 278 DFISNMITGTSQ 289
Score = 41.9 bits (94), Expect = 1e-04
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Frame = +3
Query: 42 EKTHINIVVIGHVDSGKSTTTGHLIY-----KCGGIDKTYHREVREG 167
+K IN++V+GHVD+GKST GHL++ IDK H R G
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNG 231
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 82.6 bits (195), Expect = 7e-17
Identities = 39/53 (73%), Positives = 43/53 (81%), Gaps = 4/53 (7%)
Frame = +3
Query: 33 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK----TYHREVREGGPGN 179
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDK + +E +E G G+
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGS 53
Score = 65.3 bits (152), Expect = 1e-11
Identities = 29/32 (90%), Positives = 30/32 (93%)
Frame = +1
Query: 139 KRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 234
KRTIEKFEKEAQEMGKGSFKYAWVLDKLK +
Sbjct: 36 KRTIEKFEKEAQEMGKGSFKYAWVLDKLKVTK 67
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 80.6 bits (190), Expect = 3e-16
Identities = 34/73 (46%), Positives = 51/73 (69%)
Frame = +1
Query: 139 KRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGH 318
KRT+EK+E+EA+E G+ S+ +W +D ERE+G T+++ FET K + TI+DAPGH
Sbjct: 138 KRTLEKYEREAKEKGRESWYLSWCMDTNDEEREKGKTVEVGRAYFETEKRHFTILDAPGH 197
Query: 319 RDFIKNMITXTSQ 357
+ F+ NMI +Q
Sbjct: 198 KSFVPNMIVGANQ 210
Score = 50.0 bits (114), Expect = 5e-07
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 4/49 (8%)
Frame = +3
Query: 36 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK----TYHREVREGG 170
G K HIN+V +GHVD+GKST G L++ G +DK Y RE +E G
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKG 152
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 51.2 bits (117), Expect = 2e-07
Identities = 25/49 (51%), Positives = 33/49 (67%)
Frame = +1
Query: 211 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITXTSQ 357
+DK K E++RGITI++A +E+ + D PGH DFIKNMI TSQ
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQ 131
Score = 28.7 bits (61), Expect = 1.3
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 45 KTHINIVVIGHVDSGKSTTT 104
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 51.2 bits (117), Expect = 2e-07
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +1
Query: 211 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITXTSQ 357
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMIT +Q
Sbjct: 87 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQ 135
Score = 33.1 bits (72), Expect = 0.059
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 39 KEKTHINIVVIGHVDSGKSTTT 104
++K H+N+ IGHVD GK+T T
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLT 66
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 51.2 bits (117), Expect = 2e-07
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +1
Query: 211 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITXTSQ 357
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMIT +Q
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQ 136
Score = 33.1 bits (72), Expect = 0.059
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 39 KEKTHINIVVIGHVDSGKSTTT 104
++K H+N+ IGHVD GK+T T
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLT 67
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 51.2 bits (117), Expect = 2e-07
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +1
Query: 211 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITXTSQ 357
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMIT +Q
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQ 136
Score = 33.1 bits (72), Expect = 0.059
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 39 KEKTHINIVVIGHVDSGKSTTT 104
++K H+N+ IGHVD GK+T T
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLT 67
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 51.2 bits (117), Expect = 2e-07
Identities = 25/49 (51%), Positives = 33/49 (67%)
Frame = +1
Query: 211 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITXTSQ 357
+DK K E++RGITI++A +E+ + D PGH DFIKNMI TSQ
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQ 131
Score = 28.7 bits (61), Expect = 1.3
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 45 KTHINIVVIGHVDSGKSTTT 104
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 42.3 bits (95), Expect = 1e-04
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = +1
Query: 208 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDF 327
+LDKL+ ERERGIT+ Y + +ID PGH DF
Sbjct: 76 MLDKLQVERERGITVKAQTAALRHRGYLLNLIDTPGHVDF 115
Score = 30.3 bits (65), Expect = 0.41
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 57 NIVVIGHVDSGKSTTTGHLIYKCGGI 134
N ++ HVD GKST L+ CG +
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAV 69
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 39.1 bits (87), Expect = 9e-04
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +1
Query: 208 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDF 327
V D L ERERGIT+ A + + + +ID PGH DF
Sbjct: 64 VTDFLDIERERGITVQSAAVNLDWKGHRINLIDTPGHVDF 103
Score = 35.1 bits (77), Expect = 0.015
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +3
Query: 57 NIVVIGHVDSGKSTTTGHLIYKCGGIDKTYH 149
NI VI HVD+GK+T T L+Y G I H
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHVAGH 57
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 35.1 bits (77), Expect = 0.015
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +1
Query: 211 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDF 327
+D + ER+RGITI A + + IID PGH DF
Sbjct: 87 MDFMDLERQRGITIQSAATYVDWHGTNINIIDTPGHVDF 125
Score = 33.9 bits (74), Expect = 0.034
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +3
Query: 57 NIVVIGHVDSGKSTTTGHLIYKCGGIDKTYHREVR 161
NI + H+DSGK+T T ++Y G ID + EVR
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRIDSMH--EVR 78
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 33.1 bits (72), Expect = 0.059
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +3
Query: 33 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKTYHREVR 161
M +++ N+ VI HVD GKST T L+ K G I + E R
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETR 55
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 33.1 bits (72), Expect = 0.059
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +3
Query: 33 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKTYHREVR 161
M +++ N+ VI HVD GKST T L+ K G I + E R
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETR 55
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 31.1 bits (67), Expect = 0.24
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 9 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 119
++IRD P K+ + V+G+VD+GKST G L +
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 31.1 bits (67), Expect = 0.24
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 9 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 119
++IRD P K+ + V+G+VD+GKST G L +
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 28.7 bits (61), Expect = 1.3
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 54 INIVVIGHVDSGKSTTT 104
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 1.3
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 54 INIVVIGHVDSGKSTTT 104
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 211 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDF 327
+D + E+ RGIT+ + + +ID+PGH DF
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDF 96
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 211 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDF 327
+D + E+ RGIT+ + + +ID+PGH DF
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDF 96
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 139 KRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 237
KR ++ EKE + F Y LDK+K ER+
Sbjct: 273 KRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 139 KRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 237
KR ++ EKE + F Y LDK+K ER+
Sbjct: 208 KRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>Z74473-4|CAA98953.1| 390|Caenorhabditis elegans Hypothetical
protein F56H9.4 protein.
Length = 390
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 39 KEKTHINIVVIGHVDSGKSTTTGHL-IYKCGGIDKTYHREVREG 167
++K + +++IG +SGKST + I CGG R ++ G
Sbjct: 40 RKKKALKLLIIGPGESGKSTIVKQVRILHCGGYSVEEKRALKHG 83
>Z72505-6|CAA96613.2| 358|Caenorhabditis elegans Hypothetical
protein C50C10.7 protein.
Length = 358
Score = 28.3 bits (60), Expect = 1.7
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 105 GHLIYKCGGIDKTYHREVREGGPGNG*RILQICLGI 212
GH IY+ G ID ++++ G + IL C GI
Sbjct: 111 GHFIYRYGAIDSQFYQKYLSGFKQSLLYILPFCYGI 146
>AF216966-1|AAF23508.1| 358|Caenorhabditis elegans seven
transmembrane receptor 2 protein.
Length = 358
Score = 28.3 bits (60), Expect = 1.7
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 105 GHLIYKCGGIDKTYHREVREGGPGNG*RILQICLGI 212
GH IY+ G ID ++++ G + IL C GI
Sbjct: 111 GHFIYRYGAIDSQFYQKYLSGFKQSLLYILPFCYGI 146
>U58760-5|AAK31464.1| 1076|Caenorhabditis elegans Hypothetical
protein C27A2.1 protein.
Length = 1076
Score = 27.1 bits (57), Expect = 3.9
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 63 VVIGHVDSGKSTTTGHLIYKCGGIDKTYHREVR 161
+++GH SGKS+ + CGG K+ R R
Sbjct: 46 MILGHNGSGKSSIICGICLACGGSPKSLGRSER 78
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 26.6 bits (56), Expect = 5.1
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +1
Query: 205 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITXT 351
W+++KL R +T W ++ YVT I A + + +N++ T
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI-AGYAKSWTQNLVQLT 1490
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 26.6 bits (56), Expect = 5.1
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +1
Query: 205 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITXT 351
W+++KL R +T W ++ YVT I A + + +N++ T
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI-AGYAKSWTQNLVQLT 1490
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 26.6 bits (56), Expect = 5.1
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +1
Query: 205 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITXT 351
W+++KL R +T W ++ YVT I A + + +N++ T
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI-AGYAKSWTQNLVQLT 1490
>Z73973-4|CAE54908.1| 367|Caenorhabditis elegans Hypothetical
protein F25D1.1b protein.
Length = 367
Score = 26.2 bits (55), Expect = 6.7
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -2
Query: 357 LRGSCDHVLDEISVSRSINDGNIVLASF-ELPESNI 253
LR CD VLDE V S ++ +V+ F PE NI
Sbjct: 253 LREVCDDVLDECLVKGSRDNMTMVVVCFPAAPEVNI 288
>Z73973-3|CAA98265.1| 468|Caenorhabditis elegans Hypothetical
protein F25D1.1a protein.
Length = 468
Score = 26.2 bits (55), Expect = 6.7
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -2
Query: 357 LRGSCDHVLDEISVSRSINDGNIVLASF-ELPESNI 253
LR CD VLDE V S ++ +V+ F PE NI
Sbjct: 354 LREVCDDVLDECLVKGSRDNMTMVVVCFPAAPEVNI 389
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 26.2 bits (55), Expect = 6.7
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
Frame = +1
Query: 214 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNM 339
D L E++RG +I I + Y + IID PGH +F M
Sbjct: 172 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEM 218
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 26.2 bits (55), Expect = 6.7
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
Frame = +1
Query: 214 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNM 339
D L E++RG +I I + Y + IID PGH +F M
Sbjct: 47 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEM 93
>AF026213-6|AAB71307.1| 655|Caenorhabditis elegans Temporarily
assigned gene nameprotein 123 protein.
Length = 655
Score = 25.8 bits (54), Expect = 8.9
Identities = 6/13 (46%), Positives = 7/13 (53%)
Frame = -2
Query: 132 YHHICRSSDQWWW 94
Y H+C WWW
Sbjct: 570 YFHLCAEDYHWWW 582
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,747,947
Number of Sequences: 27780
Number of extensions: 146314
Number of successful extensions: 435
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 435
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 482051610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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