Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32289
(358 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 154 3e-40
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 153 6e-40
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 109 1e-26
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 77 8e-17
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 25 0.20
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 0.47
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 22 2.5
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 21 4.4
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 20 7.6
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 154 bits (374), Expect = 3e-40
Identities = 72/73 (98%), Positives = 72/73 (98%)
Frame = +1
Query: 139 KRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGH 318
KRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGH
Sbjct: 36 KRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGH 95
Query: 319 RDFIKNMITXTSQ 357
RDFIKNMIT TSQ
Sbjct: 96 RDFIKNMITGTSQ 108
Score = 82.2 bits (194), Expect = 2e-18
Identities = 39/53 (73%), Positives = 43/53 (81%), Gaps = 4/53 (7%)
Frame = +3
Query: 33 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK----TYHREVREGGPGN 179
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDK + +E +E G G+
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGS 53
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 153 bits (371), Expect = 6e-40
Identities = 71/73 (97%), Positives = 72/73 (98%)
Frame = +1
Query: 139 KRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGH 318
KRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYYVTIIDAPGH
Sbjct: 36 KRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYVTIIDAPGH 95
Query: 319 RDFIKNMITXTSQ 357
RDFIKNMIT TSQ
Sbjct: 96 RDFIKNMITGTSQ 108
Score = 82.2 bits (194), Expect = 2e-18
Identities = 39/53 (73%), Positives = 43/53 (81%), Gaps = 4/53 (7%)
Frame = +3
Query: 33 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK----TYHREVREGGPGN 179
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDK + +E +E G G+
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGS 53
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 109 bits (262), Expect = 1e-26
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = +1
Query: 205 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITXTSQ 357
WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMIT TSQ
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 51
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 76.6 bits (180), Expect = 8e-17
Identities = 34/35 (97%), Positives = 34/35 (97%)
Frame = +1
Query: 253 DIALWKFETSKYYVTIIDAPGHRDFIKNMITXTSQ 357
DIALWKFETSKYYVTIIDAPGHRDFIKNMIT TSQ
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 35
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 25.4 bits (53), Expect = 0.20
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 45 KTHINIVVIGHVDSGKST 98
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
Score = 22.2 bits (45), Expect = 1.9
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 292 VTIIDAPGHRDFI 330
VT +D PGH FI
Sbjct: 195 VTFLDTPGHAAFI 207
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 0.47
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 54 INIVVIGHVDSGKST 98
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 21.8 bits (44), Expect = 2.5
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1
Query: 46 FSLPIFG*SRITNCV 2
FSLPIFG I +C+
Sbjct: 57 FSLPIFGTRWIFSCI 71
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 21.0 bits (42), Expect = 4.4
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -3
Query: 236 SRSAFSLSNTQAYLKDPLPISWASFSNFSMVRFVNT 129
+RS F L N +KD L ++ F+N + F T
Sbjct: 78 TRSPFLLLNDPELIKDILIRDFSKFANRGLGVFERT 113
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 20.2 bits (40), Expect = 7.6
Identities = 10/34 (29%), Positives = 12/34 (35%)
Frame = +3
Query: 75 HVDSGKSTTTGHLIYKCGGIDKTYHREVREGGPG 176
H D G S + H C G T + R G
Sbjct: 795 HTDIGNSQSLAHQDQCCPGFTMTKSGKTRHQNTG 828
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,446
Number of Sequences: 438
Number of extensions: 1733
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8308335
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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