Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32279
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF099925-14|AAX55690.1|  679|Caenorhabditis elegans Calcium bind...    28   4.6  
Z81588-2|CAB04712.1|  379|Caenorhabditis elegans Hypothetical pr...    27   6.0  
Z81579-4|CAE17915.1|  212|Caenorhabditis elegans Hypothetical pr...    27   6.0  
Z72507-8|CAA96632.1| 1101|Caenorhabditis elegans Hypothetical pr...    27   8.0  
AC006810-8|AAK84621.1|  364|Caenorhabditis elegans Hypothetical ...    27   8.0  

>AF099925-14|AAX55690.1|  679|Caenorhabditis elegans Calcium binding
           protein homologprotein 1, isoform d protein.
          Length = 679

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -3

Query: 241 LPSLDVVAVSQAPSPESNPDSPLPVTTMVVAETTI 137
           +P+  V+  ++ PS +S     + VTT  V+ TTI
Sbjct: 559 VPTTTVIQTTETPSTKSKTTKKVKVTTTTVSTTTI 593


>Z81588-2|CAB04712.1|  379|Caenorhabditis elegans Hypothetical
           protein T07D10.2 protein.
          Length = 379

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -1

Query: 258 GNLRACCLPWMW*PFLRLPLR 196
           GNL +C  PW+W  F R  L+
Sbjct: 330 GNLNSCMNPWLWFHFNRKQLK 350


>Z81579-4|CAE17915.1|  212|Caenorhabditis elegans Hypothetical
           protein R13H4.8 protein.
          Length = 212

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +2

Query: 425 CCG*KARSCICAPRCRC 475
           CCG     C C PRC C
Sbjct: 79  CCGCGCGCCCCRPRCCC 95


>Z72507-8|CAA96632.1| 1101|Caenorhabditis elegans Hypothetical
           protein F17C11.10 protein.
          Length = 1101

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -2

Query: 113 ERCVAGT*PCDLQKLSRFIKINDFG 39
           ER V+ + P DL    RF+K N FG
Sbjct: 440 ERFVSNSSPMDLDATQRFLKYNRFG 464


>AC006810-8|AAK84621.1|  364|Caenorhabditis elegans Hypothetical
           protein Y5H2B.1 protein.
          Length = 364

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 11/42 (26%), Positives = 22/42 (52%)
 Frame = +1

Query: 43  KSLILMNLDNFCRSHGQVPATHLSNVCLINFRW*FLRLPWLS 168
           K L + N   +C    +V    ++ +C+I F W F +L +++
Sbjct: 8   KFLTINNFSRYCLKIVKVHIIWITIICIIYFNWRFKKLDFMA 49


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,137,247
Number of Sequences: 27780
Number of extensions: 252388
Number of successful extensions: 746
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 740
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)