Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32278
         (424 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   4.6  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   4.6  
AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical prot...    23   4.6  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   6.0  
EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    22   8.0  

>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -3

Query: 341 ADRAERLLPGALRDAPSPQIILTTI 267
           A + + +   ++ D+PSP  ILT++
Sbjct: 520 AAKVQHMNTSSMNDSPSPTTILTSV 544


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -3

Query: 419 QXREQGHQDHHRGPAPRHSEKHSASEADRAERLLP 315
           Q ++Q H  HH     +   K++    + +ER+LP
Sbjct: 779 QQQQQQHHHHHLQQQQQIVGKNTLYSRNSSERMLP 813


>AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical protein
           protein.
          Length = 257

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 10/25 (40%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
 Frame = -3

Query: 410 EQGH-QDHHRGPAPRHSEKHSASEA 339
           + GH + HH+     H   HSA EA
Sbjct: 223 DSGHMRSHHQHYTANHQNGHSAPEA 247


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 401 HQDHHRGPAPRHSEKHSAS 345
           HQ HH+ P   H ++H  S
Sbjct: 119 HQHHHQHPHLPHVQQHHPS 137


>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = -3

Query: 401 HQDHHRGPAPRHSEKHSASEA-DRAER 324
           H D + G A   ++K S SEA ++ ER
Sbjct: 75  HSDRYNGEAGGRAKKQSFSEALEKIER 101


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 371,252
Number of Sequences: 2352
Number of extensions: 5979
Number of successful extensions: 27
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 35060166
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)