Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32278
         (424 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF047661-4|AAC04435.2|  931|Caenorhabditis elegans Hypothetical ...    29   1.4  
AL031632-7|CAA21009.2| 1528|Caenorhabditis elegans Hypothetical ...    27   5.5  
AF025470-3|AAB71057.1|  394|Caenorhabditis elegans Hypothetical ...    27   5.5  
AF016682-10|AAB66183.1|  252|Caenorhabditis elegans Hypothetical...    27   5.5  
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr...    27   7.3  
Z47812-1|CAA87795.2| 1326|Caenorhabditis elegans Hypothetical pr...    27   7.3  
U67953-4|AAL13329.1|  732|Caenorhabditis elegans Hypothetical pr...    27   7.3  
AL031635-5|CAA21042.1| 1113|Caenorhabditis elegans Hypothetical ...    27   7.3  

>AF047661-4|AAC04435.2|  931|Caenorhabditis elegans Hypothetical
           protein M70.1 protein.
          Length = 931

 Score = 29.1 bits (62), Expect = 1.4
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -3

Query: 359 KHSASEADRAERLLPGALRDAPSPQIILTTIFIVR 255
           KHSASEA R E+L+  +  D  S + ++ +I + +
Sbjct: 376 KHSASEAARLEKLIENSRNDQISAKKVIDSIILCK 410


>AL031632-7|CAA21009.2| 1528|Caenorhabditis elegans Hypothetical
           protein Y32B12B.4 protein.
          Length = 1528

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = -3

Query: 389 HRGPAPRHSEKHSASEADRAERLLPGALRDAP 294
           H GP     E+H  +E D  E LL G L D P
Sbjct: 258 HSGPVAMKMEEHEETEEDFLE-LLNGTLDDVP 288


>AF025470-3|AAB71057.1|  394|Caenorhabditis elegans Hypothetical
           protein W10D9.3 protein.
          Length = 394

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = +1

Query: 112 SYRLKIDFVWEFLSFSSRLNNLTFRF 189
           +YR KIDF+ EF+  + +L N+ F+F
Sbjct: 173 NYRSKIDFLEEFV--TKKLENVNFKF 196


>AF016682-10|AAB66183.1|  252|Caenorhabditis elegans Hypothetical
           protein T07D3.2 protein.
          Length = 252

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +1

Query: 229 SFIFLS*FPLTIKMVVKIICGDGASLSAPGSKRSALSASDAECFSLC 369
           S +FLS FPLT  + + ++ G+ + +S    +   LS  D  C + C
Sbjct: 4   SIVFLSLFPLTNSLQMVVVYGEPSDMS-ESQEYQGLSLDD--CIATC 47


>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
           protein W01F3.3 protein.
          Length = 2175

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -1

Query: 394 TTTEARRPGTARNTRRPKPTELSVCCRERSETP 296
           TTT  +RP T   T  P+P E     +E++E P
Sbjct: 163 TTTTTKRPPTTTTTEDPQPFEFHE-LQEQAENP 194


>Z47812-1|CAA87795.2| 1326|Caenorhabditis elegans Hypothetical
           protein T05H10.1 protein.
          Length = 1326

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +3

Query: 90  YSIIIYRKLPIKNRFCVGIPFVFE*TK*FNIPF 188
           Y   I R++PIKN F     F  E  + +N+PF
Sbjct: 556 YKTEISREMPIKNVFNHAFEFFNERARAYNLPF 588


>U67953-4|AAL13329.1|  732|Caenorhabditis elegans Hypothetical
           protein ZC13.3 protein.
          Length = 732

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -1

Query: 376 RPGTARNTRRPKPTEL 329
           RP T + T++PKPTE+
Sbjct: 189 RPWTVKQTKKPKPTEV 204


>AL031635-5|CAA21042.1| 1113|Caenorhabditis elegans Hypothetical
           protein Y47D3B.7 protein.
          Length = 1113

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 10/37 (27%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = -3

Query: 401 HQDHHRGPAPRHSEKHSASEA-DRAERLLPGALRDAP 294
           +  HH+ P P H   H   +  +  E++   ++ DAP
Sbjct: 220 YSQHHQSPPPHHHHHHPMPKIHENPEQVASPSIEDAP 256


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,098,315
Number of Sequences: 27780
Number of extensions: 149521
Number of successful extensions: 436
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 436
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 692685370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)