Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32277
         (516 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M73077-1|AAA58618.1|  835|Homo sapiens glucocorticoid receptor r...    30   5.5  
BC150257-1|AAI50258.1| 1499|Homo sapiens GRLF1 protein protein.        30   5.5  
BC131565-1|AAI31566.1|  749|Homo sapiens GRLF1 protein protein.        30   5.5  
AF159851-1|AAF80386.1| 1514|Homo sapiens Rho GAP p190-A protein.       30   5.5  
AB051509-1|BAB21813.2| 1499|Homo sapiens KIAA1722 protein protein.     30   5.5  
AK123968-1|BAC85736.1|  132|Homo sapiens protein ( Homo sapiens ...    29   9.7  

>M73077-1|AAA58618.1|  835|Homo sapiens glucocorticoid receptor
           repression factor 1 protein.
          Length = 835

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = +3

Query: 327 DHTVYKVTEEGNKKVAVDGAKDA-QQIMLDYSDNVYFYGPDKKPKVVTENGVQEIVG 494
           + +VY      ++K  +D AK+  Q+++L+YS+  Y    D KP       +Q+++G
Sbjct: 82  EESVYTDIYGKHQKQIIDKAKEEFQELLLEYSELFYELELDAKPSKEKMGVIQDVLG 138


>BC150257-1|AAI50258.1| 1499|Homo sapiens GRLF1 protein protein.
          Length = 1499

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = +3

Query: 327 DHTVYKVTEEGNKKVAVDGAKDA-QQIMLDYSDNVYFYGPDKKPKVVTENGVQEIVG 494
           + +VY      ++K  +D AK+  Q+++L+YS+  Y    D KP       +Q+++G
Sbjct: 469 EESVYMDIYGKHQKQIIDKAKEEFQELLLEYSELFYELELDAKPSKEKMGVIQDVLG 525


>BC131565-1|AAI31566.1|  749|Homo sapiens GRLF1 protein protein.
          Length = 749

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = +3

Query: 327 DHTVYKVTEEGNKKVAVDGAKDA-QQIMLDYSDNVYFYGPDKKPKVVTENGVQEIVG 494
           + +VY      ++K  +D AK+  Q+++L+YS+  Y    D KP       +Q+++G
Sbjct: 469 EESVYMDIYGKHQKQIIDKAKEEFQELLLEYSELFYELELDAKPSKEKMGVIQDVLG 525


>AF159851-1|AAF80386.1| 1514|Homo sapiens Rho GAP p190-A protein.
          Length = 1514

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = +3

Query: 327 DHTVYKVTEEGNKKVAVDGAKDA-QQIMLDYSDNVYFYGPDKKPKVVTENGVQEIVG 494
           + +VY      ++K  +D AK+  Q+++L+YS+  Y    D KP       +Q+++G
Sbjct: 469 EESVYTDIYGKHQKQIIDKAKEEFQELLLEYSELFYELELDAKPSKEKMGVIQDVLG 525


>AB051509-1|BAB21813.2| 1499|Homo sapiens KIAA1722 protein protein.
          Length = 1499

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = +3

Query: 327 DHTVYKVTEEGNKKVAVDGAKDA-QQIMLDYSDNVYFYGPDKKPKVVTENGVQEIVG 494
           + +VY      ++K  +D AK+  Q+++L+YS+  Y    D KP       +Q+++G
Sbjct: 469 EESVYMDIYGKHQKQIIDKAKEEFQELLLEYSELFYELELDAKPSKEKMGVIQDVLG 525


>AK123968-1|BAC85736.1|  132|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41974 fis, clone SKNMC2005772. ).
          Length = 132

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +1

Query: 145 MTVQARPHPSTTLNWRSSAPNPVFTFTTTKTAALRN 252
           +T  + P P  +L WRSS   P    T + T+  RN
Sbjct: 26  VTPASSPGPQASLAWRSSGSRPCCPLTASLTSPWRN 61


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,539,668
Number of Sequences: 237096
Number of extensions: 1030676
Number of successful extensions: 6371
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6369
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)