Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32277
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           23   1.9  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   1.9  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   3.3  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   4.3  
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              22   4.3  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   4.3  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    21   5.7  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   10.0 
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   10.0 

>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 14/55 (25%), Positives = 22/55 (40%)
 Frame = +3

Query: 177 DSKLAFFGAKSGIYVYDNEDGSVKKYGTVDDSVIDIVKVNGTGPLYVLTEDHTVY 341
           D  +     K  +Y+Y + D S   Y     +V + VK     P YV+ +    Y
Sbjct: 494 DQNVWVLSNKLAMYLYGSIDSSKINYRIFKANVKEAVKDTXCDPNYVVPDSEHGY 548


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +3

Query: 318 LTEDHTVYKVTEEGNKKVAVDGAKDAQQIMLDYSDNV 428
           LTE + VYKV   G+  + V GA   +    D++D V
Sbjct: 459 LTERNRVYKVETIGDAYMVVSGAPVKEN---DHADRV 492


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -2

Query: 494 ANDFLHPIFGH 462
           +ND +HP++GH
Sbjct: 270 SNDKVHPLYGH 280



 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = +1

Query: 154 QARPHPSTTLNWRSSAPNP 210
           Q  PH S     R S PNP
Sbjct: 24  QPSPHQSPQAPQRGSPPNP 42


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 147 HQAFSWPYRFCIDKG 103
           HQ FS+P R  + KG
Sbjct: 616 HQIFSFPARLSLPKG 630


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +3

Query: 123 GTATKMLDDGTSSTASIDDSKLAFF 197
           GTA +++DD      ++DD  +  F
Sbjct: 38  GTAQQIIDDINEGKINMDDENVLLF 62


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 435 YGPDKKPKVVTENGVQEI 488
           YGP+K PKV  +    EI
Sbjct: 202 YGPEKGPKVPEKKKEDEI 219


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 443 RQKAESCDRKWG 478
           R + ++CDR WG
Sbjct: 114 RVRVDACDRLWG 125


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 336 VYKVTEEGNKKVAVDG 383
           VYKV   G+K +AV G
Sbjct: 459 VYKVETVGDKYMAVSG 474


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 336 VYKVTEEGNKKVAVDG 383
           VYKV   G+K +AV G
Sbjct: 459 VYKVETVGDKYMAVSG 474


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,998
Number of Sequences: 438
Number of extensions: 2206
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)