Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32274
         (446 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL121800-3|CAB57995.1|  355|Drosophila melanogaster EG:BACN5I9.3...    27   8.7  
AE014298-513|AAF45863.2|  983|Drosophila melanogaster CG32498-PN...    27   8.7  

>AL121800-3|CAB57995.1|  355|Drosophila melanogaster EG:BACN5I9.3
           protein.
          Length = 355

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
 Frame = +3

Query: 279 TPFQHNRVYSTVSPFVYXPXRYVTDPGRXDPSRXNXGRYI---PXNSGAYNGDRGDRG 443
           +P + + + +T S     P RY++   R   SR +   Y      +S   NG+RG+RG
Sbjct: 105 SPSKRHSLSTTTSNSSSAPYRYLSGSSRSRGSRGDCHEYYQLQQHSSSLSNGNRGNRG 162


>AE014298-513|AAF45863.2|  983|Drosophila melanogaster CG32498-PN,
           isoform N protein.
          Length = 983

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
 Frame = +3

Query: 279 TPFQHNRVYSTVSPFVYXPXRYVTDPGRXDPSRXNXGRYI---PXNSGAYNGDRGDRG 443
           +P + + + +T S     P RY++   R   SR +   Y      +S   NG+RG+RG
Sbjct: 105 SPSKRHSLSTTTSNSSSAPYRYLSGSSRSRGSRGDCHEYYQLQQHSSSLSNGNRGNRG 162


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,427,692
Number of Sequences: 53049
Number of extensions: 233131
Number of successful extensions: 488
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 488
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1435027293
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)