Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32272
(516 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1604.05 |pgi1||glucose-6-phosphate isomerase |Schizosaccharo... 250 7e-68
SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 28 0.95
SPBC23G7.08c |rga7||GTPase activating protein Rga7|Schizosacchar... 27 1.7
SPAC1F12.09 |gpi17||pig-S|Schizosaccharomyces pombe|chr 1|||Manual 26 2.9
SPBC887.18c |||transcription adaptor protein |Schizosaccharomyce... 26 3.8
SPCC1450.11c |cek1||serine/threonine protein kinase Cek1|Schizos... 26 3.8
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 26 3.8
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 25 6.7
SPAC2E12.02 |hsf1|hstf, hsf|transcription factor Hsf1|Schizosacc... 25 6.7
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 6.7
SPAC1296.05c |||cyclin L family cyclin|Schizosaccharomyces pombe... 25 8.9
SPBC1539.01c |||mitochondrial ribosomal protein subunit L15|Schi... 25 8.9
>SPBC1604.05 |pgi1||glucose-6-phosphate isomerase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 250 bits (613), Expect = 7e-68
Identities = 115/164 (70%), Positives = 136/164 (82%), Gaps = 1/164 (0%)
Frame = +1
Query: 28 ALKPYAN-HLKVHFVSNIDGTHLAEVLKKLNPETALFIIASKTFTTQETITNASSAKTWF 204
ALKPY +L++HFVSNIDGTHLAE LKK +PET LF+IASKTFTT ET TNA SAK WF
Sbjct: 175 ALKPYGQENLELHFVSNIDGTHLAEALKKCDPETTLFLIASKTFTTAETCTNAKSAKDWF 234
Query: 205 LESAKDPSAVARHFVALSTNAEKVTAFGIDANNMFGFWDWVGGRYSLWSAIGLSISLYIG 384
L SAKDPS VA+HFVALSTN ++VTAFGI A NMF F DWVGGRYS+WSAIGLS++LYIG
Sbjct: 235 LASAKDPSHVAKHFVALSTNEKEVTAFGISAQNMFEFSDWVGGRYSVWSAIGLSVALYIG 294
Query: 385 HENFEKLLDGANFMDQHFVTAPLEKNAPVILALLGVWYHNFYGA 516
+ENFE L GA+ MD++F + PLEKN P + AL+ +WY +F+GA
Sbjct: 295 YENFEAFLSGAHAMDEYFCSTPLEKNIPALAALISIWYSDFFGA 338
>SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 462
Score = 27.9 bits (59), Expect = 0.95
Identities = 30/92 (32%), Positives = 39/92 (42%)
Frame = -2
Query: 488 PNRAKITGAFFSSGAVTKCWSMKLAPSRSFSKFSCPMYSEMDRPIADHSEYLPPTQSQKP 309
P+R K+ + S K + S +FS P S I DHS PP+ K
Sbjct: 208 PSRVKLPTSILSKSPPLKVPNKNR--SSTFSPLRTPTSSSKTFVIVDHSTPSPPSIRTK- 264
Query: 308 NMLLASIPNAVTFSAFVDKATKCLATAEGSLA 213
L A PN+ TF+ K + LAT E S A
Sbjct: 265 --LEAFAPNS-TFA--TQKRLRRLATLESSPA 291
>SPBC23G7.08c |rga7||GTPase activating protein
Rga7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 27.1 bits (57), Expect = 1.7
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 359 PIADHSEYLPPTQSQKPNMLLASIP 285
P+A ++E PP Q P +LL ++P
Sbjct: 433 PLASNAENKPPVAQQSPPVLLPTLP 457
>SPAC1F12.09 |gpi17||pig-S|Schizosaccharomyces pombe|chr 1|||Manual
Length = 554
Score = 26.2 bits (55), Expect = 2.9
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = -2
Query: 191 AELALVIVSCVVKVLDAMMNSAVSGFSFFKTSARWVPSMLDTKWTLR 51
+ELA++IV+C+ + + S F+ F ++ PS +TK T++
Sbjct: 191 SELAILIVNCLWEAFSPQVMEVWSKFTRFSSTVE--PSRAETKRTVQ 235
>SPBC887.18c |||transcription adaptor protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 339
Score = 25.8 bits (54), Expect = 3.8
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = -1
Query: 414 SVQKFLEVFVSDVQRDGQTDCGPQRISAPDPVPEAEHVVSVDTERGDLLGVRR 256
S K VFV+D++ + + PD E + ++ E G L GV++
Sbjct: 175 SRDKLNSVFVNDIKAGYVAPLACETLELPDSESLKERITAISLENGLLGGVQK 227
>SPCC1450.11c |cek1||serine/threonine protein kinase
Cek1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1338
Score = 25.8 bits (54), Expect = 3.8
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +1
Query: 79 DGTHLAEVLKKLNPETALFIIASKTFTTQETITNASSAKTWFLESAKDPSAVARHFVALS 258
D LAE+LKK+ P+ L +I ++ + N FL D + +R ++
Sbjct: 1228 DEIELAEILKKIFPKLTLVLIDDPWSILKKLLQN-EQFNVVFLHFGNDKVSSSRLMYSVR 1286
Query: 259 TNA 267
T+A
Sbjct: 1287 TSA 1289
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.8 bits (54), Expect = 3.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 350 PQSVCPSRCTSDTKTSRNFWTEPISWTSTSS 442
P + + CT+DT S TE S TS++S
Sbjct: 69 PVEITSTSCTTDTSASTPIITESTSSTSSAS 99
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 25.0 bits (52), Expect = 6.7
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -2
Query: 173 IVSCVVKVLDAMMNSAVSGFSFFKTSA 93
I S K + A NS +SGFS TSA
Sbjct: 194 ISSADAKTVSASSNSTISGFSTSTTSA 220
>SPAC2E12.02 |hsf1|hstf, hsf|transcription factor
Hsf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 609
Score = 25.0 bits (52), Expect = 6.7
Identities = 21/61 (34%), Positives = 26/61 (42%)
Frame = +1
Query: 256 STNAEKVTAFGIDANNMFGFWDWVGGRYSLWSAIGLSISLYIGHENFEKLLDGANFMDQH 435
S+ K+T F NM D WS G S L IGHE+F KL+ F +
Sbjct: 44 SSQNRKITQFSNKLYNMVN--DSSTDSLIRWSDRGDSF-LVIGHEDFAKLVLPRYFKHNN 100
Query: 436 F 438
F
Sbjct: 101 F 101
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.0 bits (52), Expect = 6.7
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +1
Query: 121 ETALFIIASKTFTTQETITNASSAKTWFLESAKDPSAVA 237
ET+ I S T T++SSA +W S DPS A
Sbjct: 931 ETSSSAITSSV-AASVTPTSSSSASSWSSSSEVDPSTAA 968
Score = 25.0 bits (52), Expect = 6.7
Identities = 21/76 (27%), Positives = 33/76 (43%)
Frame = -2
Query: 455 SSGAVTKCWSMKLAPSRSFSKFSCPMYSEMDRPIADHSEYLPPTQSQKPNMLLASIPNAV 276
SS A+T + + P+ S S S SE+D P S T S + S ++V
Sbjct: 933 SSSAITSSVAASVTPTSSSSASSWSSSSEVD-PSTAASATGSSTSSIATASVSGSSTSSV 991
Query: 275 TFSAFVDKATKCLATA 228
++ D +T +A A
Sbjct: 992 ATASATDSSTSSIAAA 1007
>SPAC1296.05c |||cyclin L family cyclin|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 24.6 bits (51), Expect = 8.9
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +1
Query: 139 IASKTFTTQETITNASSAKTWFLESAKDPSAVARHFVALSTNAEKVTAFGIDANNM 306
I SKT T ++ + + + E KD + AR F+A +E++ + +NM
Sbjct: 80 IGSKTTETPASVQDICNVVVYLKERFKDTNFEARGFIAHDLYSEEMYSSRNRLSNM 135
>SPBC1539.01c |||mitochondrial ribosomal protein subunit
L15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 210
Score = 24.6 bits (51), Expect = 8.9
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +1
Query: 91 LAEVLKKLNPETA 129
LAEV KK NPETA
Sbjct: 131 LAEVAKKWNPETA 143
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,002,822
Number of Sequences: 5004
Number of extensions: 38017
Number of successful extensions: 153
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 153
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 208287218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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