Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32272
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110500-9|CAE54920.1| 586|Caenorhabditis elegans Hypothetical ... 248 2e-66
AL110500-8|CAB60430.1| 551|Caenorhabditis elegans Hypothetical ... 248 2e-66
Z81466-5|CAE45043.1| 1309|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z81466-4|CAB03868.2| 1311|Caenorhabditis elegans Hypothetical pr... 27 6.0
AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical... 27 6.0
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 27 6.0
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 27 6.0
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 27 6.0
AF067945-7|ABQ13059.1| 954|Caenorhabditis elegans Mechanosensor... 27 6.0
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 27 6.0
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 27 6.0
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 27 6.0
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 27 6.0
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 27 6.0
AF024503-5|AAG24096.1| 330|Caenorhabditis elegans Serpentine re... 27 6.0
>AL110500-9|CAE54920.1| 586|Caenorhabditis elegans Hypothetical
protein Y87G2A.8b protein.
Length = 586
Score = 248 bits (607), Expect = 2e-66
Identities = 116/163 (71%), Positives = 131/163 (80%)
Frame = +1
Query: 28 ALKPYANHLKVHFVSNIDGTHLAEVLKKLNPETALFIIASKTFTTQETITNASSAKTWFL 207
+LK Y VHFVSN+DGTH+AEV KKLN ET LFIIASKTFTTQETITNA +AK WFL
Sbjct: 204 SLKNYQIGPNVHFVSNVDGTHVAEVTKKLNAETTLFIIASKTFTTQETITNAETAKEWFL 263
Query: 208 ESAKDPSAVARHFVALSTNAEKVTAFGIDANNMFGFWDWVGGRYSLWSAIGLSISLYIGH 387
A D AVA+HFVALSTN K FGID NMF FWDWVGGRYSLWSAIGLSI+++IG
Sbjct: 264 AKAGDAGAVAKHFVALSTNVTKAVEFGIDEKNMFEFWDWVGGRYSLWSAIGLSIAVHIGF 323
Query: 388 ENFEKLLDGANFMDQHFVTAPLEKNAPVILALLGVWYHNFYGA 516
+N+EKLLDGA +D+HFV PLEKN PVILA++GV Y+N YGA
Sbjct: 324 DNYEKLLDGAFSVDEHFVNTPLEKNIPVILAMIGVLYNNIYGA 366
>AL110500-8|CAB60430.1| 551|Caenorhabditis elegans Hypothetical
protein Y87G2A.8a protein.
Length = 551
Score = 248 bits (607), Expect = 2e-66
Identities = 116/163 (71%), Positives = 131/163 (80%)
Frame = +1
Query: 28 ALKPYANHLKVHFVSNIDGTHLAEVLKKLNPETALFIIASKTFTTQETITNASSAKTWFL 207
+LK Y VHFVSN+DGTH+AEV KKLN ET LFIIASKTFTTQETITNA +AK WFL
Sbjct: 169 SLKNYQIGPNVHFVSNVDGTHVAEVTKKLNAETTLFIIASKTFTTQETITNAETAKEWFL 228
Query: 208 ESAKDPSAVARHFVALSTNAEKVTAFGIDANNMFGFWDWVGGRYSLWSAIGLSISLYIGH 387
A D AVA+HFVALSTN K FGID NMF FWDWVGGRYSLWSAIGLSI+++IG
Sbjct: 229 AKAGDAGAVAKHFVALSTNVTKAVEFGIDEKNMFEFWDWVGGRYSLWSAIGLSIAVHIGF 288
Query: 388 ENFEKLLDGANFMDQHFVTAPLEKNAPVILALLGVWYHNFYGA 516
+N+EKLLDGA +D+HFV PLEKN PVILA++GV Y+N YGA
Sbjct: 289 DNYEKLLDGAFSVDEHFVNTPLEKNIPVILAMIGVLYNNIYGA 331
>Z81466-5|CAE45043.1| 1309|Caenorhabditis elegans Hypothetical
protein C09H6.1b protein.
Length = 1309
Score = 27.5 bits (58), Expect = 6.0
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +1
Query: 13 SWSQXALKPYANHLKVHFVSNIDGTHLAEVLKKLNPETALFIIASKTFTTQETITNASS 189
SWS + + NH K+H + T+ A V+K N A + SKT ++ T SS
Sbjct: 619 SWSSRSKEVIVNHEKLHPTVVVANTNEAPVVK--NEIEAKVEVLSKTVSSPVECTEESS 675
>Z81466-4|CAB03868.2| 1311|Caenorhabditis elegans Hypothetical
protein C09H6.1a protein.
Length = 1311
Score = 27.5 bits (58), Expect = 6.0
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +1
Query: 13 SWSQXALKPYANHLKVHFVSNIDGTHLAEVLKKLNPETALFIIASKTFTTQETITNASS 189
SWS + + NH K+H + T+ A V+K N A + SKT ++ T SS
Sbjct: 619 SWSSRSKEVIVNHEKLHPTVVVANTNEAPVVK--NEIEAKVEVLSKTVSSPVECTEESS 675
>AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical
protein Y51A2D.15 protein.
Length = 1222
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -2
Query: 410 SRSFSKFSCPMYSEMDRPIADHSEYLPPTQSQKPNMLLASIPN 282
SRSFSK S P + S +L ++ KP++L + N
Sbjct: 1165 SRSFSKISALKIQSSPSPSSSFSRFLSLRRTAKPSLLQGAYTN 1207
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 91 LAEVLKKLNPETALFIIASKTFTTQETITNASSAK 195
+ E LKK++PET + T TT T T K
Sbjct: 276 IGEALKKMDPETTTTTSTTTTTTTAPTTTKMEEPK 310
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 91 LAEVLKKLNPETALFIIASKTFTTQETITNASSAK 195
+ E LKK++PET + T TT T T K
Sbjct: 490 IGEALKKMDPETTTTTSTTTTTTTAPTTTKMEEPK 524
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 91 LAEVLKKLNPETALFIIASKTFTTQETITNASSAK 195
+ E LKK++PET + T TT T T K
Sbjct: 626 IGEALKKMDPETTTTTSTTTTTTTAPTTTKMEEPK 660
>AF067945-7|ABQ13059.1| 954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform i protein.
Length = 954
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 91 LAEVLKKLNPETALFIIASKTFTTQETITNASSAK 195
+ E LKK++PET + T TT T T K
Sbjct: 675 IGEALKKMDPETTTTTSTTTTTTTAPTTTKMEEPK 709
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 91 LAEVLKKLNPETALFIIASKTFTTQETITNASSAK 195
+ E LKK++PET + T TT T T K
Sbjct: 675 IGEALKKMDPETTTTTSTTTTTTTAPTTTKMEEPK 709
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 91 LAEVLKKLNPETALFIIASKTFTTQETITNASSAK 195
+ E LKK++PET + T TT T T K
Sbjct: 675 IGEALKKMDPETTTTTSTTTTTTTAPTTTKMEEPK 709
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 91 LAEVLKKLNPETALFIIASKTFTTQETITNASSAK 195
+ E LKK++PET + T TT T T K
Sbjct: 667 IGEALKKMDPETTTTTSTTTTTTTAPTTTKMEEPK 701
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 91 LAEVLKKLNPETALFIIASKTFTTQETITNASSAK 195
+ E LKK++PET + T TT T T K
Sbjct: 679 IGEALKKMDPETTTTTSTTTTTTTAPTTTKMEEPK 713
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 91 LAEVLKKLNPETALFIIASKTFTTQETITNASSAK 195
+ E LKK++PET + T TT T T K
Sbjct: 679 IGEALKKMDPETTTTTSTTTTTTTAPTTTKMEEPK 713
>AF024503-5|AAG24096.1| 330|Caenorhabditis elegans Serpentine
receptor, class h protein246 protein.
Length = 330
Score = 27.5 bits (58), Expect = 6.0
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 85 THLAEVLKKLNPETALFIIASKTFTTQETITNASSAKTWF 204
T LK L E +F I+ KTF TQ+T A + + F
Sbjct: 208 TFFVLTLKNLFKENKVFNISRKTFETQQTFFKAITIQFMF 247
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,296,558
Number of Sequences: 27780
Number of extensions: 221544
Number of successful extensions: 847
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 838
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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