Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32272
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   7.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   7.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   7.5  
X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.       21   10.0 
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   10.0 
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     21   10.0 

>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 312 LLGLGRGQIFAVVRNRSVHLAVHRTRKLRETS 407
           L+ L    +  V+ N  V LAV+ T KLR  +
Sbjct: 69  LIVLAIVNVMVVLGNVLVILAVYHTSKLRNVT 100


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -1

Query: 183 RIGYRLLCGESLGCYDEQRCLRVQLLQDLSQV 88
           ++   ++ G S GC    RC+    ++DL +V
Sbjct: 133 KVDVEVIGGASRGCTAVLRCVVPSFVKDLVRV 164


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -1

Query: 183 RIGYRLLCGESLGCYDEQRCLRVQLLQDLSQV 88
           ++   ++ G S GC    RC+    ++DL +V
Sbjct: 133 KVDVEVIGGASRGCTAVLRCVVPSFVKDLVRV 164


>X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.
          Length = 70

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = -1

Query: 330 PDPVPEAEHVVSVDTERG 277
           P P PEAE     D E G
Sbjct: 27  PAPEPEAEADAEADPEAG 44


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -2

Query: 182 ALVIVSCVVK 153
           ALV+VSCV K
Sbjct: 96  ALVVVSCVTK 105


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -2

Query: 182 ALVIVSCVVK 153
           ALV+VSCV K
Sbjct: 96  ALVVVSCVTK 105


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,438
Number of Sequences: 438
Number of extensions: 2318
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)