Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32271
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70203-4|CAA94107.1|  322|Caenorhabditis elegans Hypothetical pr...   268   1e-72
AF003389-2|AAC71132.1|  321|Caenorhabditis elegans Hypothetical ...   253   5e-68
U58727-5|AAB00585.1| 1106|Caenorhabditis elegans Hypothetical pr...    55   3e-08
Z81028-1|CAB02690.1| 1099|Caenorhabditis elegans Hypothetical pr...    54   5e-08
U37429-10|AAN63413.2|  100|Caenorhabditis elegans Hypothetical p...    29   2.0  
AF101319-5|AAC69356.2|  530|Caenorhabditis elegans Hypothetical ...    29   2.6  
Z81117-4|CAB03319.1|  249|Caenorhabditis elegans Hypothetical pr...    28   4.6  
U80442-3|AAB37665.1|  333|Caenorhabditis elegans Hypothetical pr...    27   6.0  
Z35598-1|CAA84656.1| 1343|Caenorhabditis elegans Hypothetical pr...    27   8.0  

>Z70203-4|CAA94107.1|  322|Caenorhabditis elegans Hypothetical
           protein C05G5.4 protein.
          Length = 322

 Score =  268 bits (658), Expect = 1e-72
 Identities = 124/170 (72%), Positives = 137/170 (80%)
 Frame = +2

Query: 5   AGTEHLGKPVFGTVKEAKAGTGATASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQH 184
           AGTEHLG PVF  V EA+  TGA ASVIYVP               +PL+VCITEG+PQH
Sbjct: 69  AGTEHLGLPVFKNVSEARNKTGADASVIYVPASAAGSAIEEAMDAEIPLVVCITEGIPQH 128

Query: 185 DMVRVKHALLRQNKSRLVGPNCPGIIAPEKCKIGIMPAAVHKRGCIGVVSRSGTYTYEAC 364
           DMVRVK  LL+QNK+RLVGPNCPGII+ ++CKIGIMP  +HKRGCIG+VSRSGT TYEA 
Sbjct: 129 DMVRVKSRLLKQNKTRLVGPNCPGIISADQCKIGIMPGHIHKRGCIGIVSRSGTLTYEAV 188

Query: 365 HQTTITGXGQTLCVGIGGDPFNGTDFIDCLEVFLKDPETKGIILIGEIGG 514
           HQTT  G GQTLCVGIGGDPFNGT+FIDCL VFL+DPETKGIILIGEIGG
Sbjct: 189 HQTTQVGFGQTLCVGIGGDPFNGTNFIDCLNVFLEDPETKGIILIGEIGG 238


>AF003389-2|AAC71132.1|  321|Caenorhabditis elegans Hypothetical
           protein F23H11.3 protein.
          Length = 321

 Score =  253 bits (620), Expect = 5e-68
 Identities = 119/170 (70%), Positives = 133/170 (78%)
 Frame = +2

Query: 5   AGTEHLGKPVFGTVKEAKAGTGATASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQH 184
           AG  HLG PVFG+V EAK  TGA A+VIYVP  G            + LIV ITEG+PQ 
Sbjct: 70  AGQTHLGLPVFGSVAEAKDRTGADATVIYVPAAGAARAIHEAMDAEIGLIVAITEGIPQQ 129

Query: 185 DMVRVKHALLRQNKSRLVGPNCPGIIAPEKCKIGIMPAAVHKRGCIGVVSRSGTYTYEAC 364
           DMVRVK+ LL+QNKSRL+GPNCPGIIA   CKIGIMP  +HK+GCIG+VSRSGT TYEA 
Sbjct: 130 DMVRVKNRLLKQNKSRLLGPNCPGIIASGDCKIGIMPGHIHKKGCIGIVSRSGTLTYEAV 189

Query: 365 HQTTITGXGQTLCVGIGGDPFNGTDFIDCLEVFLKDPETKGIILIGEIGG 514
           HQTT  G GQT C+GIGGDPFNGT+FIDCLEVFL+D +TKGIILIGEIGG
Sbjct: 190 HQTTTVGLGQTRCIGIGGDPFNGTNFIDCLEVFLEDEQTKGIILIGEIGG 239


>U58727-5|AAB00585.1| 1106|Caenorhabditis elegans Hypothetical
           protein D1005.1 protein.
          Length = 1106

 Score = 54.8 bits (126), Expect = 3e-08
 Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 8/130 (6%)
 Frame = +2

Query: 149 LIVCITEGVPQHDMVRVKHALLRQNKSRLVGPNCPGIIAPEKCKIG--------IMPAAV 304
           +I  I EGVP++   R    +       LVGP   G I P   KIG        I+ + +
Sbjct: 593 VIAIIAEGVPENQ-TRKLLKIAHDRGVTLVGPATVGGIKPGCFKIGNTGGMMDNILASKL 651

Query: 305 HKRGCIGVVSRSGTYTYEACHQTTITGXGQTLCVGIGGDPFNGTDFIDCLEVFLKDPETK 484
           ++ G +  VSRSG  + E  +  +    G    + IGGD + G+ + D +  +  D   K
Sbjct: 652 YRPGSVAYVSRSGGMSNELNNIISQNTNGVYEGIAIGGDRYPGSTYTDHVIRYQNDDRVK 711

Query: 485 GIILIGEIGG 514
            I+L+GE+GG
Sbjct: 712 MIVLLGEVGG 721


>Z81028-1|CAB02690.1| 1099|Caenorhabditis elegans Hypothetical
           protein B0365.1 protein.
          Length = 1099

 Score = 54.4 bits (125), Expect = 5e-08
 Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 8/130 (6%)
 Frame = +2

Query: 149 LIVCITEGVPQHDMVRVKHALLRQNKSRLVGPNCPGIIAPEKCKIG--------IMPAAV 304
           +I  I EGVP++   R    +       L+GP   G I P   KIG        I+ + +
Sbjct: 589 VIAIIAEGVPENQ-TRKLLKIAEDKGVTLIGPATVGGIKPGCFKIGNTGGMMDNILASKL 647

Query: 305 HKRGCIGVVSRSGTYTYEACHQTTITGXGQTLCVGIGGDPFNGTDFIDCLEVFLKDPETK 484
           ++ G +  VSRSG  + E  +  +    G    + IGGD + G+ + D +  +  D   K
Sbjct: 648 YRPGSVAYVSRSGGMSNELNNIISQNTNGVYEGIAIGGDRYPGSTYTDHVMRYQHDDRVK 707

Query: 485 GIILIGEIGG 514
            I+L+GE+GG
Sbjct: 708 MIVLLGEVGG 717


>U37429-10|AAN63413.2|  100|Caenorhabditis elegans Hypothetical
           protein F09E5.16 protein.
          Length = 100

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = -3

Query: 109 SSRGRYINNRGSCSCACLCLFD-CTKHRLTK 20
           SSRG  +  R + S AC CL   CT H +TK
Sbjct: 70  SSRGSVMRRRSAGSYACPCLHKVCTYHCMTK 100


>AF101319-5|AAC69356.2|  530|Caenorhabditis elegans Hypothetical
           protein K08D9.6 protein.
          Length = 530

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -3

Query: 382 SNSSLMTGFIGICPRTRYNSDATTFVHCSWHDTN 281
           S+ ++  G + + P  RYNS   T++H SWHD N
Sbjct: 352 SSDTVKRGKVVVKPE-RYNS---TWIHYSWHDAN 381


>Z81117-4|CAB03319.1|  249|Caenorhabditis elegans Hypothetical
           protein T06E6.10 protein.
          Length = 249

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = +1

Query: 148 PHCVHYRRCATT*YGASKTCPLETKQ 225
           P C+H   C TT     K C L T Q
Sbjct: 133 PTCIHVNACTTTKCSPGKKCALHTVQ 158


>U80442-3|AAB37665.1|  333|Caenorhabditis elegans Hypothetical
           protein T20F5.4 protein.
          Length = 333

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 16/30 (53%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = +2

Query: 170 GVPQHDMVRVKHALLRQN-KSRLVGPNCPG 256
           G+ + DM+R KH LL QN +SRL  P  PG
Sbjct: 19  GMQELDMLRAKHTLLIQNLRSRL--PIIPG 46


>Z35598-1|CAA84656.1| 1343|Caenorhabditis elegans Hypothetical
           protein F10F2.2 protein.
          Length = 1343

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -3

Query: 427 EGIPSNTDTQSLAXASNSSLMTGFIGICPRTRYNSDAT 314
           E + S+ D   +A   NSS + GF  +C R R N   T
Sbjct: 247 ETLDSSNDNSLIAFCDNSSAIRGFESVC-RLRPNDPTT 283


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,895,394
Number of Sequences: 27780
Number of extensions: 242933
Number of successful extensions: 689
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 689
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)