Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32260
(493 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0916 - 25932934-25933090,25933170-25933276,25933356-259334... 40 0.001
11_06_0610 - 25449085-25453284 29 2.0
02_05_0497 - 29502012-29502101,29502128-29502197,29502302-295024... 29 2.0
02_02_0009 + 6068260-6068591,6068797-6068917,6069034-6069122,606... 29 2.0
01_06_0146 + 26969011-26969995,26970878-26970930 29 2.0
08_02_0520 - 18121561-18121821,18122216-18122470,18122560-181227... 29 2.7
11_01_0036 + 268028-268168,268734-268839,268920-269031,269126-26... 28 3.5
02_01_0602 + 4481869-4482111,4482315-4482472,4482603-4483467 28 3.5
12_02_0818 - 23427625-23429022 28 4.7
02_05_1008 - 33461225-33462334 28 4.7
12_02_1136 - 26381025-26381408,26381661-26381804,26382345-263824... 27 6.2
05_07_0204 - 28397597-28397737,28398225-28398342,28399215-283993... 27 6.2
01_01_0548 - 4033077-4033349,4034007-4034261,4034362-4034533,403... 27 6.2
11_06_0184 - 21006659-21009823 27 8.2
11_04_0153 + 14159820-14162417 27 8.2
09_02_0386 - 8371631-8372125,8373696-8374139 27 8.2
07_03_0387 - 17536026-17536636,17536772-17537150 27 8.2
05_03_0156 - 9007543-9007628,9007923-9009189 27 8.2
02_04_0482 + 23291986-23292181,23292289-23292317,23293500-232936... 27 8.2
02_01_0736 - 5490671-5491813 27 8.2
01_05_0647 + 23910318-23910694,23911732-23911867,23912067-239122... 27 8.2
01_05_0208 - 19291953-19292552,19293027-19293134,19293231-192933... 27 8.2
>06_03_0916 -
25932934-25933090,25933170-25933276,25933356-25933422,
25933509-25933624,25933873-25933944,25934055-25934255,
25934652-25934728,25935131-25935230
Length = 298
Score = 39.9 bits (89), Expect = 0.001
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Frame = +3
Query: 180 PLGDDEDMTSDPPKSVPSV----DKRPPPITDDSPVRAFLNGENCLNGGTGWWKYEFCYG 347
P+ + + M S P++ +V ++R P D + + C GWW YEFCY
Sbjct: 81 PVEETKTMKSIIPQNATNVIIESERRVKPKDPDELLEILK--DQCFYRHEGWWSYEFCYY 138
Query: 348 KHVLQYHIDRAGEKT--TVMLGRFDEKA 425
+ Q H++ GEK +LG +D A
Sbjct: 139 GKIRQVHVE--GEKVIQEYVLGEYDADA 164
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.1 bits (62), Expect = 2.0
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3
Query: 195 EDMTSDPPKSVPSVDKRPPP 254
E+ T PPKS P +K PPP
Sbjct: 764 EEYTPSPPKSSPPEEKSPPP 783
Score = 27.9 bits (59), Expect = 4.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 195 EDMTSDPPKSVPSVDKRPP 251
E+ T PPKS P +K PP
Sbjct: 601 EEYTPSPPKSTPPAEKSPP 619
>02_05_0497 -
29502012-29502101,29502128-29502197,29502302-29502411,
29502530-29502641,29503341-29503498,29503592-29503807,
29504127-29504354,29504722-29504801,29504886-29505056,
29505179-29505281,29505369-29505551,29506313-29506813,
29506935-29507100,29507517-29507566,29508047-29508127,
29508291-29508398,29508874-29508939,29509053-29509109,
29509442-29509507,29509917-29510006,29510850-29510975,
29511681-29511717,29512192-29512250,29512562-29512615,
29513294-29513428,29513542-29513612,29513720-29513957
Length = 1141
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -2
Query: 180 GAVRISNGFRRPSQIFRLSKLQVYP 106
G RI NG RRP RL ++++YP
Sbjct: 849 GPFRIINGVRRPIPFIRLLEVELYP 873
>02_02_0009 +
6068260-6068591,6068797-6068917,6069034-6069122,
6069207-6069291,6069421-6069580,6069667-6069743,
6069848-6069898,6069979-6070069,6070167-6070468,
6070549-6070830,6070911-6071388,6071457-6071560,
6071647-6071809,6071895-6072017,6072099-6072217,
6072304-6072636,6072713-6073003,6073088-6073171,
6073260-6073393,6073478-6073705,6073795-6073966,
6074062-6074316,6074408-6074668
Length = 1444
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -3
Query: 485 NSLIYRFRSLPFIILDPVQMRFLIKSTQHYGGLLAGAIYV 366
NS +Y F+ L IIL + M +++ H + GAI++
Sbjct: 520 NSFVYIFKILQLIILGSIGMTVFLRTKMHRRSVEDGAIFL 559
>01_06_0146 + 26969011-26969995,26970878-26970930
Length = 345
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 180 PLGDDEDMTSDPPKSVPSVDKRPPPITDDSP 272
P D +D S PP P PPPI+ +P
Sbjct: 12 PATDGDDAQSHPPPPTPHPATDPPPISPQNP 42
>08_02_0520 -
18121561-18121821,18122216-18122470,18122560-18122731,
18122824-18123105,18123159-18123292,18123425-18123508,
18123611-18123901,18123982-18124314,18124620-18124750,
18124826-18124930,18125011-18125167,18125248-18125351,
18125442-18125602,18125800-18126116,18126369-18126650,
18127011-18127312,18127609-18127699,18127771-18127824,
18128110-18128186,18128279-18128438,18128545-18128629,
18129059-18129367,18129514-18129890
Length = 1507
Score = 28.7 bits (61), Expect = 2.7
Identities = 9/40 (22%), Positives = 21/40 (52%)
Frame = -3
Query: 485 NSLIYRFRSLPFIILDPVQMRFLIKSTQHYGGLLAGAIYV 366
N +YRFR+ +++ + M +++ H+ G +Y+
Sbjct: 569 NMFVYRFRAFQLLVITIIVMTLFLRTNMHHETRTDGIVYL 608
>11_01_0036 +
268028-268168,268734-268839,268920-269031,269126-269241,
269321-269399,269476-269614,269689-269747,269924-270218,
270303-270362,270502-270933
Length = 512
Score = 28.3 bits (60), Expect = 3.5
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Frame = +3
Query: 39 KRT-V*DFIISSIRLMDNADQTVKD--ILAVLKVGKFEKDGETHLK-FELHPLGDDEDMT 206
KRT V D+++ L++ A++ + D + +LK + E D + L+ + + +DE +
Sbjct: 329 KRTFVPDYMLEKQYLINKAEEELMDDDVDNILKQDR-ETDQQQELEDSDQEIMSEDELTS 387
Query: 207 SDPPKSVPSVDKRPPPITDDS 269
SD P S + +R I DDS
Sbjct: 388 SDKPPSCKQIRRRTYIIEDDS 408
>02_01_0602 + 4481869-4482111,4482315-4482472,4482603-4483467
Length = 421
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 186 GDDEDMTSDPPKSVPSVDKR 245
GDD+D T+ PP SV VD R
Sbjct: 400 GDDDDWTTAPPSSVLFVDPR 419
>12_02_0818 - 23427625-23429022
Length = 465
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 213 PPKSVPSVDKRPPPITDDSPVRAFLNGENCL 305
PP +PS D+ P P+ + L+GE CL
Sbjct: 279 PPSHLPSADQNGEPPPPPPPLLSELDGELCL 309
>02_05_1008 - 33461225-33462334
Length = 369
Score = 27.9 bits (59), Expect = 4.7
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +3
Query: 213 PPKSVPSVDKRPPPITDDSPVRAFLNGENCLNGGTGW 323
PP SV S PPP+++ VR +G GGT W
Sbjct: 76 PPNSVGSAPPAPPPLSELERVRRIGSGA----GGTVW 108
>12_02_1136 -
26381025-26381408,26381661-26381804,26382345-26382413,
26382537-26382637,26383488-26383493,26383759-26383996
Length = 313
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 210 DPPKSVPSVDKRPPPITDDSPVRAFLNGENCLNGGT 317
DPP+ VP++D+ P I + S V A GE C T
Sbjct: 58 DPPQ-VPAMDRGVPEILNFSMVPAKSKGEKCSEHST 92
>05_07_0204 -
28397597-28397737,28398225-28398342,28399215-28399339,
28399683-28399744,28399867-28400035,28400594-28400767,
28400856-28401089
Length = 340
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +3
Query: 57 FIISSIRLMDNADQTVKDILAVLKVGKFEKDGETHLKFEL 176
F S +RL N V+++L + ++ +FEK+G +LK EL
Sbjct: 290 FFASKVRLGKNG---VEEVLGLGQLSEFEKEGLENLKGEL 326
>01_01_0548 -
4033077-4033349,4034007-4034261,4034362-4034533,
4034616-4034839,4035168-4035332,4035591-4035881,
4035971-4036303,4036391-4036485,4036570-4036689,
4036778-4036934,4037176-4037279,4037383-4037543,
4037636-4037952,4038655-4038936,4039020-4039321,
4039453-4039543,4040227-4040280,4040367-4040684,
4041008-4041092,4041178-4041266,4041474-4041594,
4042136-4042431
Length = 1434
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -3
Query: 485 NSLIYRFRSLPFIILDPVQMRFLIKSTQHYGGLLAGAIYV 366
NS IY F+ + +++ + M +ST H + G IY+
Sbjct: 536 NSFIYVFKFIQLLLVALITMTVFFRSTMHRDSVDDGIIYL 575
>11_06_0184 - 21006659-21009823
Length = 1054
Score = 27.1 bits (57), Expect = 8.2
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 162 LKFELHPLGDDEDMTSDPPKSVPSVDKRPPPITD 263
+K +L P D +D PP+S S D+ PPP D
Sbjct: 284 VKRQLPPQSDGDDKQQPPPQSDGS-DQPPPPQPD 316
>11_04_0153 + 14159820-14162417
Length = 865
Score = 27.1 bits (57), Expect = 8.2
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -2
Query: 405 PTLRWSSRRRDLCGTGARAFRSRTRISTSLYH 310
P L W RRR + G A F ++ T + H
Sbjct: 209 PALSWDRRRRIVSGLAAALFYLHEQLDTQIIH 240
>09_02_0386 - 8371631-8372125,8373696-8374139
Length = 312
Score = 27.1 bits (57), Expect = 8.2
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +3
Query: 210 DPPKSVPSVDKRPPPITDDSPVR 278
+PP VPS D+ PP ++ P++
Sbjct: 150 EPPPDVPSPDEPPPDVSKPDPLQ 172
>07_03_0387 - 17536026-17536636,17536772-17537150
Length = 329
Score = 27.1 bits (57), Expect = 8.2
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 171 ELHPLGDDEDMTSDPPKSVPSVDKRPPPITDDSPVRAF 284
E+ P+ ++E+ DP + V + K+ PP+T PV F
Sbjct: 247 EVEPMVEEEE---DPEERVMELVKQIPPLTQPPPVEHF 281
>05_03_0156 - 9007543-9007628,9007923-9009189
Length = 450
Score = 27.1 bits (57), Expect = 8.2
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +3
Query: 237 DKRPPPITDDSPVRAFLNGENCLNGGTG 320
D+RP P D+ V A L G C G G
Sbjct: 72 DRRPGPGPDNGDVMALLGGMVCTTSGDG 99
>02_04_0482 +
23291986-23292181,23292289-23292317,23293500-23293602,
23293855-23293979,23294788-23294920,23295468-23295739,
23295806-23295873,23296126-23296265,23296443-23296529,
23296610-23297118,23297203-23298020,23298054-23298252,
23299084-23299228,23299260-23299314,23301184-23301310,
23301399-23301468,23301980-23302085,23302168-23302279,
23302775-23302897,23303000-23303159,23303283-23303359,
23303457-23303509,23303683-23303737,23304032-23304706
Length = 1478
Score = 27.1 bits (57), Expect = 8.2
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 234 VDKRPPPITDDSPVRA-FLNGENCLNGGTGWWKYEFCYG 347
VD T D P R+ +NG + + G W++ FC+G
Sbjct: 59 VDSATVAGTVDEPFRSQIINGVSLSSDERGSWRHAFCHG 97
>02_01_0736 - 5490671-5491813
Length = 380
Score = 27.1 bits (57), Expect = 8.2
Identities = 15/58 (25%), Positives = 26/58 (44%)
Frame = +3
Query: 54 DFIISSIRLMDNADQTVKDILAVLKVGKFEKDGETHLKFELHPLGDDEDMTSDPPKSV 227
D + + L D+ TV+D L + +D +H + L+ + DD +S P V
Sbjct: 17 DLLEAEPLLDDSHLMTVRDPLPAAYIAVCRRDWYSHSYYRLYKVEDDSSSSSSPSSPV 74
>01_05_0647 +
23910318-23910694,23911732-23911867,23912067-23912277,
23912357-23912724,23913793-23914081,23914173-23914372,
23914452-23914646
Length = 591
Score = 27.1 bits (57), Expect = 8.2
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -2
Query: 429 NALSHQIDPTLRWSSRRRDLC 367
N +H+ DP ++ S+RRRDLC
Sbjct: 395 NCSTHE-DPKIKLSTRRRDLC 414
>01_05_0208 -
19291953-19292552,19293027-19293134,19293231-19293344,
19293464-19293573,19293720-19293808,19293942-19294138,
19294241-19294402,19294501-19294619,19294739-19294826,
19294911-19295016,19295157-19295245,19295351-19295503,
19295631-19295723,19295823-19295889,19296217-19296329,
19296453-19296548,19297963-19298139
Length = 826
Score = 27.1 bits (57), Expect = 8.2
Identities = 17/72 (23%), Positives = 25/72 (34%)
Frame = +3
Query: 228 PSVDKRPPPITDDSPVRAFLNGENCLNGGTGWWKYEFCYGKHVLQYHIDRAGEKTTVMLG 407
PS +K P I PV+ + ++ W Y+ Q H+D+ G K G
Sbjct: 557 PSFEKMPTGIVG-GPVKLIDSNGTAIDLSNSSWSYKAGLASEYRQIHLDKPGYKWNGNNG 615
Query: 408 RFDEKAHLDWIK 443
W K
Sbjct: 616 TIPINRPFTWYK 627
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,353,699
Number of Sequences: 37544
Number of extensions: 330186
Number of successful extensions: 1165
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1162
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1023611560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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