Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32257
         (359 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC133019-1|AAI33020.1| 1427|Homo sapiens CCDC144A protein protein.     28   7.6  
BC104815-1|AAI04816.1|  725|Homo sapiens coiled-coil domain cont...    28   7.6  
BC101585-1|AAI01586.1|  725|Homo sapiens coiled-coil domain cont...    28   7.6  

>BC133019-1|AAI33020.1| 1427|Homo sapiens CCDC144A protein protein.
          Length = 1427

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +3

Query: 129 NEINYEAEYYKVAQDFNIEASKDCYTNMKAYENFMMM 239
           N+I  EA++    +   I AS+DC  +   YENFM++
Sbjct: 586 NQIYPEADFADSMEPSEI-ASEDCELSHSVYENFMLL 621


>BC104815-1|AAI04816.1|  725|Homo sapiens coiled-coil domain
           containing 144B protein.
          Length = 725

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +3

Query: 129 NEINYEAEYYKVAQDFNIEASKDCYTNMKAYENFMMM 239
           N+I  EA++    +   I AS+DC  +   YENFM++
Sbjct: 586 NQIYPEADFADSMEPSEI-ASEDCELSHSVYENFMLL 621


>BC101585-1|AAI01586.1|  725|Homo sapiens coiled-coil domain
           containing 144B protein.
          Length = 725

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +3

Query: 129 NEINYEAEYYKVAQDFNIEASKDCYTNMKAYENFMMM 239
           N+I  EA++    +   I AS+DC  +   YENFM++
Sbjct: 586 NQIYPEADFADSMEPSEI-ASEDCELSHSVYENFMLL 621


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,858,949
Number of Sequences: 237096
Number of extensions: 806575
Number of successful extensions: 1856
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1856
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2190862868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)