Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32257
         (359 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L15314-2|AAF99983.1|  322|Caenorhabditis elegans Hypothetical pr...    31   0.24 
Z92838-2|CAB07408.1|  211|Caenorhabditis elegans Hypothetical pr...    28   2.3  
X77495-1|CAA54629.1|  402|Caenorhabditis elegans lag-2 protein.        27   5.2  
AC024205-1|AAF36047.1|  402|Caenorhabditis elegans Lin-12 and gl...    27   5.2  
Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical pr...    26   9.1  
Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical pr...    26   9.1  
Z75952-2|CAB00095.1| 1100|Caenorhabditis elegans Hypothetical pr...    26   9.1  
U42848-7|AAA83612.2|  567|Caenorhabditis elegans Hypothetical pr...    26   9.1  
AC006634-1|AAF39796.1|  231|Caenorhabditis elegans Hypothetical ...    26   9.1  

>L15314-2|AAF99983.1|  322|Caenorhabditis elegans Hypothetical
           protein K06H7.7 protein.
          Length = 322

 Score = 31.1 bits (67), Expect = 0.24
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +3

Query: 279 DLFTKKMRGRSHRAVSSWFYYCQXF 353
           DL+ K MRG+S R  + WF  C+ F
Sbjct: 255 DLYQKMMRGQSSRMYTEWFDKCKIF 279


>Z92838-2|CAB07408.1|  211|Caenorhabditis elegans Hypothetical
           protein T03D8.3 protein.
          Length = 211

 Score = 27.9 bits (59), Expect = 2.3
 Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = -1

Query: 221 VGFHVCVAVLAGLDVEVLGDFVVLS-FIVDLVN 126
           V F V VA + GLD+E  GDFV+ S   +DL++
Sbjct: 8   VFFTVGVAAIYGLDLENAGDFVLPSGDFIDLIS 40


>X77495-1|CAA54629.1|  402|Caenorhabditis elegans lag-2 protein.
          Length = 402

 Score = 26.6 bits (56), Expect = 5.2
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +3

Query: 48  VPEFKTTPVDAAFVEKQKKILSLFYNVNEINYEAEY 155
           +PE K+  +D    E QKK+ ++  +V +I+ E  Y
Sbjct: 330 MPETKSMLIDPEASEAQKKVFTIEGSVQKIDEEVRY 365


>AC024205-1|AAF36047.1|  402|Caenorhabditis elegans Lin-12 and glp-1
           phenotype protein2 protein.
          Length = 402

 Score = 26.6 bits (56), Expect = 5.2
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +3

Query: 48  VPEFKTTPVDAAFVEKQKKILSLFYNVNEINYEAEY 155
           +PE K+  +D    E QKK+ ++  +V +I+ E  Y
Sbjct: 330 MPETKSMLIDPEASEAQKKVFTIEGSVQKIDEEVRY 365


>Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical protein
            B0365.7 protein.
          Length = 2769

 Score = 25.8 bits (54), Expect = 9.1
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +3

Query: 102  KILSLFYNVNEINYEAEYYKVAQDFNIEASKDCYTNMKAYE 224
            +ILSL+  VN +    EY  +     +EA++ C+    A +
Sbjct: 1824 RILSLYEKVNNLRTSEEYGLIRGKMFVEAAELCFIYKSAIQ 1864


>Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical protein
            B0365.7 protein.
          Length = 2769

 Score = 25.8 bits (54), Expect = 9.1
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +3

Query: 102  KILSLFYNVNEINYEAEYYKVAQDFNIEASKDCYTNMKAYE 224
            +ILSL+  VN +    EY  +     +EA++ C+    A +
Sbjct: 1824 RILSLYEKVNNLRTSEEYGLIRGKMFVEAAELCFIYKSAIQ 1864


>Z75952-2|CAB00095.1| 1100|Caenorhabditis elegans Hypothetical
           protein F29D10.4 protein.
          Length = 1100

 Score = 25.8 bits (54), Expect = 9.1
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -1

Query: 272 SKFLGKESDLVHHHEIFVGFHVCVAVLAGLDVEVLGDF 159
           S FL ++S +VH +E    FHV   + AG D  +   F
Sbjct: 185 SNFLLEKSRVVHQNEGDRNFHVFYQLCAGADKNLRSTF 222


>U42848-7|AAA83612.2|  567|Caenorhabditis elegans Hypothetical
           protein C31H1.8 protein.
          Length = 567

 Score = 25.8 bits (54), Expect = 9.1
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -1

Query: 287 KKIENSKFLGKESDLVHHHEIFVGFH 210
           K + N   LG E D+     IF+GF+
Sbjct: 417 KIVPNQTLLGNEHDIFPRFSIFIGFY 442


>AC006634-1|AAF39796.1|  231|Caenorhabditis elegans Hypothetical
           protein F35F11.3 protein.
          Length = 231

 Score = 25.8 bits (54), Expect = 9.1
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1

Query: 238 CTRSDSFPKNLEFSI 282
           CTR D FP N++F I
Sbjct: 128 CTRCDEFPNNIDFWI 142


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,319,204
Number of Sequences: 27780
Number of extensions: 132937
Number of successful extensions: 421
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 421
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 492763868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)