Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32256
         (516 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P19351 Cluster: Troponin T, skeletal muscle; n=46; Panc...   103   3e-21
UniRef50_UPI0000D555FF Cluster: PREDICTED: similar to CG7107-PG,...    98   9e-20
UniRef50_A1ATG0 Cluster: Glycosyl transferase, family 9; n=1; Pe...    32   6.8  

>UniRef50_P19351 Cluster: Troponin T, skeletal muscle; n=46;
           Pancrustacea|Rep: Troponin T, skeletal muscle -
           Drosophila melanogaster (Fruit fly)
          Length = 397

 Score =  103 bits (246), Expect = 3e-21
 Identities = 43/62 (69%), Positives = 53/62 (85%)
 Frame = -2

Query: 515 VDTRSYDDKKKLFEGDXEKLNKDFLEKVWQERAEQFGGRQKARLPKWFGERPGKKKGELE 336
           VDTRSYDDKKKLFEG  ++++KD  EK+W E+ EQ+ GRQK++LPKWFGERPGKK GE E
Sbjct: 272 VDTRSYDDKKKLFEGGWDEISKDSNEKIWNEKKEQYTGRQKSKLPKWFGERPGKKAGEPE 331

Query: 335 SP 330
           +P
Sbjct: 332 TP 333


>UniRef50_UPI0000D555FF Cluster: PREDICTED: similar to CG7107-PG,
           isoform G isoform 3; n=1; Tribolium castaneum|Rep:
           PREDICTED: similar to CG7107-PG, isoform G isoform 3 -
           Tribolium castaneum
          Length = 352

 Score = 98.3 bits (234), Expect = 9e-20
 Identities = 41/62 (66%), Positives = 52/62 (83%)
 Frame = -2

Query: 515 VDTRSYDDKKKLFEGDXEKLNKDFLEKVWQERAEQFGGRQKARLPKWFGERPGKKKGELE 336
           VDTRSYDDKKKLFEG  E++ K+  EK+W+++  QF  RQK++LPKWFGERPGKKKG+ E
Sbjct: 242 VDTRSYDDKKKLFEGGYEEITKETNEKLWKDKIGQFDSRQKSKLPKWFGERPGKKKGDPE 301

Query: 335 SP 330
           +P
Sbjct: 302 TP 303


>UniRef50_A1ATG0 Cluster: Glycosyl transferase, family 9; n=1;
           Pelobacter propionicus DSM 2379|Rep: Glycosyl
           transferase, family 9 - Pelobacter propionicus (strain
           DSM 2379)
          Length = 348

 Score = 32.3 bits (70), Expect = 6.8
 Identities = 17/32 (53%), Positives = 18/32 (56%)
 Frame = +2

Query: 416 RPSLATPSRGSPCSVSLXHPRTVSFCRRRIVC 511
           RP L TPS   PC+V L HP   S CRR   C
Sbjct: 291 RPYLETPS---PCTVVLYHPFPCSPCRRSPTC 319


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 297,402,050
Number of Sequences: 1657284
Number of extensions: 3884711
Number of successful extensions: 13648
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13640
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)