Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32254
         (300 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   2.2  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   2.2  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   2.9  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   2.9  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    21   3.8  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   3.8  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   3.8  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    20   6.6  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    20   6.6  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    19   8.7  

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 2.2
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +3

Query: 111 FN*KDFNMTGTVEIFHSRYF*CSLVP*SLCFLQ*SLILG 227
           F  K + +TGT  IFH+     +L+  SLC +  ++ +G
Sbjct: 157 FQLKYYQVTGTPIIFHN----LTLITYSLCVISWAVGIG 191


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 2.2
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +3

Query: 111 FN*KDFNMTGTVEIFHSRYF*CSLVP*SLCFLQ*SLILG 227
           F  K + +TGT  IFH+     +L+  SLC +  ++ +G
Sbjct: 157 FQLKYYQVTGTPIIFHN----LTLITYSLCVISWAVGIG 191


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 2.9
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -2

Query: 155 EYFHCSCHIK 126
           ++FHC C IK
Sbjct: 421 QFFHCYCPIK 430


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.0 bits (42), Expect = 2.9
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +2

Query: 164 ILLVQPSTIEFVFSPVIFDTW*FHQTHPSN*SQKFQHI 277
           I  + PST E VFS V+     F   +PS   ++F HI
Sbjct: 136 IQALDPSTNELVFSEVLL----FLDYNPSQ-KRQFLHI 168


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -2

Query: 281 RRYVEIFGSSWMDGFGEITKYQRLLEKTQT 192
           +R++E      ++GF    KYQ+ +EK  T
Sbjct: 27  QRWLERTPGLELEGFNFWGKYQKAVEKLLT 56


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -2

Query: 281 RRYVEIFGSSWMDGFGEITKYQRLLEKTQT 192
           +R++E      ++GF    KYQ+ +EK  T
Sbjct: 187 QRWLERTPGLELEGFNFWGKYQKAVEKLLT 216


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -2

Query: 281 RRYVEIFGSSWMDGFGEITKYQRLLEKTQT 192
           +R++E      ++GF    KYQ+ +EK  T
Sbjct: 187 QRWLERTPGLELEGFNFWGKYQKAVEKLLT 216


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory
          receptor candidate 45 protein.
          Length = 379

 Score = 19.8 bits (39), Expect = 6.6
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -1

Query: 81 FIYLKKDSRSLS 46
          F Y KKD RSLS
Sbjct: 4  FNYSKKDIRSLS 15


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory
          receptor candidate 8 protein.
          Length = 379

 Score = 19.8 bits (39), Expect = 6.6
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -1

Query: 81 FIYLKKDSRSLS 46
          F Y KKD RSLS
Sbjct: 4  FNYSKKDIRSLS 15


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -1

Query: 180 GCTKSIGNGIFPL 142
           GC  S+G G F L
Sbjct: 46  GCAASVGEGSFYL 58


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,279
Number of Sequences: 336
Number of extensions: 1397
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  5429307
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)