BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= epV32254 (300 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g09440.1 68418.m01093 phosphate-responsive protein, putative ... 27 3.1 At2g35150.1 68415.m04311 phosphate-responsive 1 family protein s... 26 5.4 At1g05700.1 68414.m00591 leucine-rich repeat protein kinase, put... 26 5.4 At5g61810.1 68418.m07756 mitochondrial substrate carrier family ... 25 9.4 At5g21105.1 68418.m02515 L-ascorbate oxidase, putative similar t... 25 9.4 At2g36870.1 68415.m04520 xyloglucan:xyloglucosyl transferase, pu... 25 9.4 >At5g09440.1 68418.m01093 phosphate-responsive protein, putative similar to phi-1 (phosphate-induced gene) [Nicotiana tabacum] GI:3759184; contains Pfam profile PF04674: Phosphate-induced protein 1 conserved region Length = 278 Score = 26.6 bits (56), Expect = 3.1 Identities = 10/39 (25%), Positives = 21/39 (53%) Frame = -3 Query: 298 WTPVXRDDMLKFLALVGWMGLVKLPSIKDYWRKHKLYGT 182 +TP+ R ++ F+ + + K PS+ +W+ + Y T Sbjct: 46 FTPIQRSIIVDFIRSISSVTAAKGPSVASWWKTTEKYKT 84 >At2g35150.1 68415.m04311 phosphate-responsive 1 family protein similar to phi-1 (phosphate-induced gene) [Nicotiana tabacum] GI:3759184; contains Pfam profile PF04674: Phosphate-induced protein 1 conserved region Length = 323 Score = 25.8 bits (54), Expect = 5.4 Identities = 10/37 (27%), Positives = 18/37 (48%) Frame = -3 Query: 298 WTPVXRDDMLKFLALVGWMGLVKLPSIKDYWRKHKLY 188 W P + + FL V + PS+ ++W+ +LY Sbjct: 59 WNPTHQSIIRDFLYSVSAPAPAQYPSVSNWWKTVRLY 95 >At1g05700.1 68414.m00591 leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase, gi|2129635; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069 Length = 843 Score = 25.8 bits (54), Expect = 5.4 Identities = 13/30 (43%), Positives = 14/30 (46%) Frame = -2 Query: 224 KYQRLLEKTQTLWY*AALKVSGMEYFHCSC 135 KYQ L Q L A G+EY HC C Sbjct: 648 KYQHTLSWRQRLQI-ALDAAQGLEYLHCGC 676 >At5g61810.1 68418.m07756 mitochondrial substrate carrier family protein similar to peroxisomal Ca-dependent solute carrier, Oryctolagus cuniculus,GI:2352427; contains INTERPRO:IPR001993 Mitochondrial substrate carrier family, INTERPRO:IPR002048 calcium-binding EF-hand domain Length = 478 Score = 25.0 bits (52), Expect = 9.4 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = -3 Query: 277 DMLKFLALVGWMGLVKLPSIKDYWRKHKLYG 185 D LK V L +P+IK WR+ KL G Sbjct: 226 DRLKVALQVQRTNLGVVPTIKKIWREDKLLG 256 >At5g21105.1 68418.m02515 L-ascorbate oxidase, putative similar to L-ascorbate oxidase from {Nicotiana tabacum} SP|Q40588, {Cucurbita pepo var. melopepo} SP|P37064; contains Pfam profile PF00394: Multicopper oxidase; supported by cDNA gi_15215753_gb_AY050406.1_; A false intron was added between exons 4 and 5 to circumvent the single nucleotide insertion in this BAC which, otherwise, causes a frameshift. Length = 571 Score = 25.0 bits (52), Expect = 9.4 Identities = 12/40 (30%), Positives = 19/40 (47%) Frame = -2 Query: 263 FGSSWMDGFGEITKYQRLLEKTQTLWY*AALKVSGMEYFH 144 FGS W DG +T Q + +T Y ++ G ++H Sbjct: 85 FGSPWADGAAGVT--QCAINPGETFTYNFTVEKPGTHFYH 122 >At2g36870.1 68415.m04520 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative similar to cellulase (xyloglucan endo-transglycosylase) GI:311835 from [Tropaeolum majus] Length = 299 Score = 25.0 bits (52), Expect = 9.4 Identities = 14/43 (32%), Positives = 18/43 (41%) Frame = -1 Query: 261 WL*LDGWVW*NYQVSKITGENTNSMVLGCTKSIGNGIFPLFLS 133 W DG +Y+ T + TN LGCT +PL S Sbjct: 214 WATEDGKYKADYKYQPFTAKYTNFKALGCTAYSSARCYPLSAS 256 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 6,541,211 Number of Sequences: 28952 Number of extensions: 122657 Number of successful extensions: 231 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 230 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 231 length of database: 12,070,560 effective HSP length: 70 effective length of database: 10,043,920 effective search space used: 291273680 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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