Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32247
         (446 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    23   1.3  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   2.3  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   3.0  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   7.0  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     20   9.3  

>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 11/70 (15%)
 Frame = +2

Query: 185 EHAQNQTVLSTPQWTVXMR-----YYSSLPSHIKV------NLPALSPTMESGSIVSWEK 331
           E+ + + ++ST + T+        Y+S L S+ K+      N P L+P ++  S+   ++
Sbjct: 17  ENPETELLVSTKRSTISQGCKACGYHSPLESNHKLVTFILKNPPNLNPAVQGSSLTEGKR 76

Query: 332 KEGDKLSEGD 361
            +  K   GD
Sbjct: 77  SKRSKRPNGD 86


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +2

Query: 164 KXTNKLLEHAQNQTVLSTPQWTVXMRYYSSL 256
           K  NKL  H    T+L+   WT+   Y+ ++
Sbjct: 226 KKINKLYGHQLLLTILTYLIWTIYEMYHLAI 256


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 4/27 (14%)
 Frame = -3

Query: 90  DLIP*HNCSQHYRYFXL----XLFRPD 22
           +L+P H CS++ R F +     +F PD
Sbjct: 271 ELMPKHACSEYCRVFKMLQEEDIFTPD 297


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 10/41 (24%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = +1

Query: 190 CTEPDSSIYTTMDCXDEVLFXSTITYKGQPS-SSFANHGEW 309
           C E   +I + +DC +EV+    ++    P+    A   +W
Sbjct: 379 CPEVRLNIISNLDCVNEVIGIQQLSQSLLPAIVELAEDSKW 419


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 47  FXXNYSVQMSGTVFW 3
           F  +++V  SGT FW
Sbjct: 163 FRYHFNVHNSGTHFW 177


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,689
Number of Sequences: 336
Number of extensions: 1934
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10090848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)