SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32247
         (446 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0163 - 17380601-17380710,17380796-17380856,17381076-173811...    93   7e-20
07_03_0044 - 12758606-12758676,12758765-12758860,12759197-127592...    87   8e-18
02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-28...    87   8e-18
12_01_0526 - 4171313-4171417,4171514-4171597,4171688-4171758,417...    66   2e-11
06_01_0037 - 369498-369568,369668-369760,369889-369991,370061-37...    65   2e-11
08_02_0759 - 20851828-20851932,20852190-20852285,20853231-208533...    62   1e-10
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012...    60   1e-09
02_03_0404 + 18648632-18648669,18649319-18649379,18649449-186494...    44   4e-05
04_03_0767 + 19389337-19389381,19390586-19390643,19390720-193907...    42   2e-04
01_03_0030 - 11787280-11787393,11787487-11787714,11788828-117889...    33   0.14 
10_03_0040 - 7307108-7307564,7307611-7307915                           31   0.56 
11_04_0312 - 16259612-16260231,16260264-16262796                       28   3.9  
10_03_0021 + 7129786-7130117,7130227-7130347,7131048-7131136,713...    27   5.2  
04_01_0159 - 1824343-1824405,1824485-1824595,1825282-1825448,182...    27   5.2  
02_05_1303 + 35572403-35572624,35572744-35572860,35572987-355731...    27   5.2  
03_04_0006 + 16257288-16259522                                         27   6.9  

>06_03_0163 -
           17380601-17380710,17380796-17380856,17381076-17381150,
           17381538-17381600,17381679-17381755,17382432-17382515,
           17382610-17382654,17382729-17382789,17383658-17384053,
           17384220-17384289,17387010-17387083,17387202-17387246,
           17387342-17387391,17387846-17387947,17388587-17388620,
           17388681-17388758,17388915-17388965,17389082-17389085,
           17389182-17389256,17389530-17389624
          Length = 549

 Score = 93.5 bits (222), Expect = 7e-20
 Identities = 45/101 (44%), Positives = 63/101 (62%)
 Frame = +2

Query: 143 STELAKRKXTNKLLEHAQNQTVLSTPQWTVXMRYYSSLPSHIKVNLPALSPTMESGSIVS 322
           ST +   +   + L   Q Q + +    +  +R  +  P H+ V +PALSPTM  G+I  
Sbjct: 111 STAIGPARLLWQQLIGLQQQAMGTVSACSSWIRPTARFPPHLVVGMPALSPTMNQGNIAK 170

Query: 323 WEKKEGDKLSEGDLLCEIETDKATMGFETPEXGYLAKILIP 445
           W K+EG+K+  GD++CEIETDKAT+ FE+ E GYLAKIL P
Sbjct: 171 WRKQEGEKIEVGDVICEIETDKATLEFESLEEGYLAKILAP 211


>07_03_0044 -
           12758606-12758676,12758765-12758860,12759197-12759299,
           12759379-12759474,12759537-12759603,12759682-12759749,
           12759898-12759973,12760112-12760197,12760285-12760361,
           12761461-12761533,12761627-12761875,12761997-12762089,
           12762218-12762292,12762661-12762716,12763473-12763513,
           12763907-12764001,12764085-12764158,12765052-12765145,
           12765484-12765519
          Length = 541

 Score = 86.6 bits (205), Expect = 8e-18
 Identities = 37/64 (57%), Positives = 49/64 (76%)
 Frame = +2

Query: 248 SSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEXGYL 427
           + LP H ++ +P+LSPTM  G+I  W KKEGDK+S G++LCE+ETDKAT+  E  E GYL
Sbjct: 113 ADLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYL 172

Query: 428 AKIL 439
           AKI+
Sbjct: 173 AKII 176


>02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-282648,
            282768-282923,283224-283349,283426-283560,283815-283942,
            284037-284148,284233-284547,284655-284771,284871-285166,
            285252-285783,287980-288082,288808-288881,288965-289062,
            289340-289380,289977-290032,290170-290244,290377-290469,
            290602-290850,290930-291002,291681-291766,291853-291938,
            292067-292142,292280-292347,292430-292496,292570-292665,
            292741-292843,293214-293309,293396-293466
          Length = 2047

 Score = 86.6 bits (205), Expect = 8e-18
 Identities = 37/64 (57%), Positives = 49/64 (76%)
 Frame = +2

Query: 248  SSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEXGYL 427
            + LP H ++ +P+LSPTM  G+I  W KKEGDK+S G++LCE+ETDKAT+  E  E GYL
Sbjct: 1616 ADLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYL 1675

Query: 428  AKIL 439
            AKI+
Sbjct: 1676 AKII 1679


>12_01_0526 -
           4171313-4171417,4171514-4171597,4171688-4171758,
           4171814-4171891,4174482-4174569,4174659-4174850,
           4174939-4175802
          Length = 493

 Score = 65.7 bits (153), Expect = 2e-11
 Identities = 29/59 (49%), Positives = 41/59 (69%)
 Frame = +2

Query: 269 KVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEXGYLAKILIP 445
           ++ +PALS TM  G IVSW   EGD+L++GD +  +E+DKA M  ET   G+LA +L+P
Sbjct: 51  EIFMPALSSTMTEGKIVSWTASEGDRLAKGDPVVVVESDKADMDVETFHDGFLAAVLVP 109


>06_01_0037 -
           369498-369568,369668-369760,369889-369991,370061-370156,
           370227-370293,370379-370446,370606-370681,370890-370975,
           371065-371150,371337-371409,371490-371735,371845-371937,
           372045-372119,372496-372540,372631-372708,372805-372921,
           373865-373894
          Length = 500

 Score = 65.3 bits (152), Expect = 2e-11
 Identities = 28/44 (63%), Positives = 35/44 (79%)
 Frame = +2

Query: 308 GSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEXGYLAKIL 439
           G+I  W KKEGDK+S G++LCE+ETDKAT+  E  E GYLAKI+
Sbjct: 91  GNIARWVKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKII 134


>08_02_0759 -
           20851828-20851932,20852190-20852285,20853231-20853314,
           20853411-20853481,20853568-20853655,20853745-20853936,
           20854044-20854931
          Length = 507

 Score = 62.5 bits (145), Expect = 1e-10
 Identities = 27/59 (45%), Positives = 40/59 (67%)
 Frame = +2

Query: 269 KVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEXGYLAKILIP 445
           ++ +PALS TM  G IVSW   EGD++++GD +  +E+DKA M  ET   G +A +L+P
Sbjct: 48  EIFMPALSSTMTEGKIVSWSAAEGDRVAKGDAVVVVESDKADMDVETFHDGIVAAVLVP 106


>09_04_0081 -
           14400293-14400397,14400953-14401036,14401144-14401214,
           14401293-14401380,14401487-14401678,14401772-14402704
          Length = 490

 Score = 59.7 bits (138), Expect = 1e-09
 Identities = 27/59 (45%), Positives = 40/59 (67%)
 Frame = +2

Query: 269 KVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEXGYLAKILIP 445
           ++ +PALS TM  G IVSW   EGD++++GD +  +E+DKA M  ET   G +A +L+P
Sbjct: 43  EIFMPALSSTMTEGRIVSWTAAEGDRVAKGDPVVVVESDKADMDVETFYDGIVAVVLVP 101


>02_03_0404 +
           18648632-18648669,18649319-18649379,18649449-18649476,
           18649787-18649861,18649929-18649984,18650085-18650129,
           18650224-18650475,18650586-18650680,18651114-18651204,
           18651356-18651466,18651556-18651750,18651827-18652018
          Length = 412

 Score = 44.4 bits (100), Expect = 4e-05
 Identities = 20/70 (28%), Positives = 38/70 (54%)
 Frame = +2

Query: 230 VXMRYYSSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFET 409
           V M  +  L   +   +P +  ++  G++ ++ KK GD++   + + +IETDK TM   +
Sbjct: 34  VFMDAHCQLGDLVDAVVPFMGESITDGTLATFLKKPGDRVEADEPIAQIETDKVTMDVAS 93

Query: 410 PEXGYLAKIL 439
           PE G + K +
Sbjct: 94  PEAGIIEKFV 103


>04_03_0767 +
           19389337-19389381,19390586-19390643,19390720-19390759,
           19390859-19390926,19391007-19391081,19391161-19391216,
           19391317-19391361,19391450-19391701,19391787-19391881,
           19392395-19392485,19392578-19392688,19392788-19392982,
           19393071-19393262
          Length = 440

 Score = 42.3 bits (95), Expect = 2e-04
 Identities = 16/58 (27%), Positives = 35/58 (60%)
 Frame = +2

Query: 266 IKVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEXGYLAKIL 439
           ++  +P +  ++  G++ ++ KK GD++   + + +IETDK T+   +PE G + K +
Sbjct: 74  VEAVVPFMGESVTDGTLANFLKKPGDRVEADEPIAQIETDKVTIDVASPEAGVIEKFI 131


>01_03_0030 -
           11787280-11787393,11787487-11787714,11788828-11788916,
           11789516-11789763,11789858-11790146,11790295-11790454,
           11791228-11791404
          Length = 434

 Score = 32.7 bits (71), Expect = 0.14
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = +2

Query: 314 IVSWEKKEGDKLSEGDLLCEIETDKATM 397
           ++ W   EGD++ E   LCE+++DKAT+
Sbjct: 52  LLRWFVTEGDQVDEFQRLCEVQSDKATI 79


>10_03_0040 - 7307108-7307564,7307611-7307915
          Length = 253

 Score = 30.7 bits (66), Expect = 0.56
 Identities = 16/54 (29%), Positives = 31/54 (57%)
 Frame = +2

Query: 149 ELAKRKXTNKLLEHAQNQTVLSTPQWTVXMRYYSSLPSHIKVNLPALSPTMESG 310
           E+A  +  +++ +   + T L  PQW    + YSS PS++++ L +L+  + SG
Sbjct: 173 EVASGRRRSQVFDVCSSATRL--PQWRRRQQDYSSTPSNLQLRLGSLTMVISSG 224


>11_04_0312 - 16259612-16260231,16260264-16262796
          Length = 1050

 Score = 27.9 bits (59), Expect = 3.9
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = -3

Query: 297 VGERAGRLTFICDGRLE*YLIXTVHCGVDRTVWFCACS 184
           + +R GRL    D      +I TV CG D+  W CA S
Sbjct: 364 IAKRCGRLPLALD------VIGTVLCGKDKRYWECALS 395


>10_03_0021 + 7129786-7130117,7130227-7130347,7131048-7131136,
            7131375-7131459,7131609-7131771,7132861-7132937,
            7133016-7133160,7133236-7133537,7133615-7133720,
            7134781-7134935,7135556-7135712,7135799-7135891,
            7136232-7136359,7136439-7136696,7136855-7137145,
            7137235-7137318,7138335-7138468,7138557-7138784,
            7139778-7139958,7140021-7140108,7140268-7140434,
            7140750-7141012,7141117-7141120
          Length = 1216

 Score = 27.5 bits (58), Expect = 5.2
 Identities = 13/45 (28%), Positives = 28/45 (62%)
 Frame = -3

Query: 216  VDRTVWFCACSNNLFVXFLFASSVLMHLVMFXPYSFLKTIA*DLI 82
            V+RTV++   + N++  F +A++ + H ++  PY  ++T+   LI
Sbjct: 1017 VERTVYYRERAANMYSSFPYAAAQVYHGLVEIPYIAVQTLIFGLI 1061


>04_01_0159 -
           1824343-1824405,1824485-1824595,1825282-1825448,
           1825853-1826029,1826404-1826656
          Length = 256

 Score = 27.5 bits (58), Expect = 5.2
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +2

Query: 257 PSHIKVNLPA-LSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKAT 394
           P   + N+ A   P M +GSIV        + +  D+LC+IET KA+
Sbjct: 80  PPAFRGNVKARYQPVMFNGSIVYCRTPSEVEKATRDILCKIETMKAS 126


>02_05_1303 +
           35572403-35572624,35572744-35572860,35572987-35573112,
           35573217-35573279,35573837-35573944,35574587-35574664,
           35574772-35574864,35575206-35575292,35575429-35575530,
           35575617-35575736,35575839-35575901,35575974-35576119,
           35576203-35576296,35576399-35576457,35576568-35576607,
           35576694-35576785,35576877-35576946,35578172-35578333,
           35578477-35578703,35578863-35579070,35579173-35579258,
           35579450-35579541,35579674-35579870
          Length = 883

 Score = 27.5 bits (58), Expect = 5.2
 Identities = 11/43 (25%), Positives = 21/43 (48%)
 Frame = +2

Query: 218 PQWTVXMRYYSSLPSHIKVNLPALSPTMESGSIVSWEKKEGDK 346
           P W + M+ Y   PS+ ++ +P L+  +  G+   +   E  K
Sbjct: 325 PPWLINMQRYGPPPSYPQLKIPGLNAPIPPGASFGYRPGEWGK 367


>03_04_0006 + 16257288-16259522
          Length = 744

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = +2

Query: 281 PALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEXG 421
           PA+SP+ +  ++ SW+ K G  L +G++  ++ TD   M    P  G
Sbjct: 193 PAVSPSGKRVAVASWQGKPG--LWDGEIE-DLRTDIYVMNVHKPPLG 236


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,916,782
Number of Sequences: 37544
Number of extensions: 197786
Number of successful extensions: 499
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 499
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 859680288
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -