Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32247
(446 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0163 - 17380601-17380710,17380796-17380856,17381076-173811... 93 7e-20
07_03_0044 - 12758606-12758676,12758765-12758860,12759197-127592... 87 8e-18
02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-28... 87 8e-18
12_01_0526 - 4171313-4171417,4171514-4171597,4171688-4171758,417... 66 2e-11
06_01_0037 - 369498-369568,369668-369760,369889-369991,370061-37... 65 2e-11
08_02_0759 - 20851828-20851932,20852190-20852285,20853231-208533... 62 1e-10
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 60 1e-09
02_03_0404 + 18648632-18648669,18649319-18649379,18649449-186494... 44 4e-05
04_03_0767 + 19389337-19389381,19390586-19390643,19390720-193907... 42 2e-04
01_03_0030 - 11787280-11787393,11787487-11787714,11788828-117889... 33 0.14
10_03_0040 - 7307108-7307564,7307611-7307915 31 0.56
11_04_0312 - 16259612-16260231,16260264-16262796 28 3.9
10_03_0021 + 7129786-7130117,7130227-7130347,7131048-7131136,713... 27 5.2
04_01_0159 - 1824343-1824405,1824485-1824595,1825282-1825448,182... 27 5.2
02_05_1303 + 35572403-35572624,35572744-35572860,35572987-355731... 27 5.2
03_04_0006 + 16257288-16259522 27 6.9
>06_03_0163 -
17380601-17380710,17380796-17380856,17381076-17381150,
17381538-17381600,17381679-17381755,17382432-17382515,
17382610-17382654,17382729-17382789,17383658-17384053,
17384220-17384289,17387010-17387083,17387202-17387246,
17387342-17387391,17387846-17387947,17388587-17388620,
17388681-17388758,17388915-17388965,17389082-17389085,
17389182-17389256,17389530-17389624
Length = 549
Score = 93.5 bits (222), Expect = 7e-20
Identities = 45/101 (44%), Positives = 63/101 (62%)
Frame = +2
Query: 143 STELAKRKXTNKLLEHAQNQTVLSTPQWTVXMRYYSSLPSHIKVNLPALSPTMESGSIVS 322
ST + + + L Q Q + + + +R + P H+ V +PALSPTM G+I
Sbjct: 111 STAIGPARLLWQQLIGLQQQAMGTVSACSSWIRPTARFPPHLVVGMPALSPTMNQGNIAK 170
Query: 323 WEKKEGDKLSEGDLLCEIETDKATMGFETPEXGYLAKILIP 445
W K+EG+K+ GD++CEIETDKAT+ FE+ E GYLAKIL P
Sbjct: 171 WRKQEGEKIEVGDVICEIETDKATLEFESLEEGYLAKILAP 211
>07_03_0044 -
12758606-12758676,12758765-12758860,12759197-12759299,
12759379-12759474,12759537-12759603,12759682-12759749,
12759898-12759973,12760112-12760197,12760285-12760361,
12761461-12761533,12761627-12761875,12761997-12762089,
12762218-12762292,12762661-12762716,12763473-12763513,
12763907-12764001,12764085-12764158,12765052-12765145,
12765484-12765519
Length = 541
Score = 86.6 bits (205), Expect = 8e-18
Identities = 37/64 (57%), Positives = 49/64 (76%)
Frame = +2
Query: 248 SSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEXGYL 427
+ LP H ++ +P+LSPTM G+I W KKEGDK+S G++LCE+ETDKAT+ E E GYL
Sbjct: 113 ADLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYL 172
Query: 428 AKIL 439
AKI+
Sbjct: 173 AKII 176
>02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-282648,
282768-282923,283224-283349,283426-283560,283815-283942,
284037-284148,284233-284547,284655-284771,284871-285166,
285252-285783,287980-288082,288808-288881,288965-289062,
289340-289380,289977-290032,290170-290244,290377-290469,
290602-290850,290930-291002,291681-291766,291853-291938,
292067-292142,292280-292347,292430-292496,292570-292665,
292741-292843,293214-293309,293396-293466
Length = 2047
Score = 86.6 bits (205), Expect = 8e-18
Identities = 37/64 (57%), Positives = 49/64 (76%)
Frame = +2
Query: 248 SSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEXGYL 427
+ LP H ++ +P+LSPTM G+I W KKEGDK+S G++LCE+ETDKAT+ E E GYL
Sbjct: 1616 ADLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYL 1675
Query: 428 AKIL 439
AKI+
Sbjct: 1676 AKII 1679
>12_01_0526 -
4171313-4171417,4171514-4171597,4171688-4171758,
4171814-4171891,4174482-4174569,4174659-4174850,
4174939-4175802
Length = 493
Score = 65.7 bits (153), Expect = 2e-11
Identities = 29/59 (49%), Positives = 41/59 (69%)
Frame = +2
Query: 269 KVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEXGYLAKILIP 445
++ +PALS TM G IVSW EGD+L++GD + +E+DKA M ET G+LA +L+P
Sbjct: 51 EIFMPALSSTMTEGKIVSWTASEGDRLAKGDPVVVVESDKADMDVETFHDGFLAAVLVP 109
>06_01_0037 -
369498-369568,369668-369760,369889-369991,370061-370156,
370227-370293,370379-370446,370606-370681,370890-370975,
371065-371150,371337-371409,371490-371735,371845-371937,
372045-372119,372496-372540,372631-372708,372805-372921,
373865-373894
Length = 500
Score = 65.3 bits (152), Expect = 2e-11
Identities = 28/44 (63%), Positives = 35/44 (79%)
Frame = +2
Query: 308 GSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEXGYLAKIL 439
G+I W KKEGDK+S G++LCE+ETDKAT+ E E GYLAKI+
Sbjct: 91 GNIARWVKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKII 134
>08_02_0759 -
20851828-20851932,20852190-20852285,20853231-20853314,
20853411-20853481,20853568-20853655,20853745-20853936,
20854044-20854931
Length = 507
Score = 62.5 bits (145), Expect = 1e-10
Identities = 27/59 (45%), Positives = 40/59 (67%)
Frame = +2
Query: 269 KVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEXGYLAKILIP 445
++ +PALS TM G IVSW EGD++++GD + +E+DKA M ET G +A +L+P
Sbjct: 48 EIFMPALSSTMTEGKIVSWSAAEGDRVAKGDAVVVVESDKADMDVETFHDGIVAAVLVP 106
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 59.7 bits (138), Expect = 1e-09
Identities = 27/59 (45%), Positives = 40/59 (67%)
Frame = +2
Query: 269 KVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEXGYLAKILIP 445
++ +PALS TM G IVSW EGD++++GD + +E+DKA M ET G +A +L+P
Sbjct: 43 EIFMPALSSTMTEGRIVSWTAAEGDRVAKGDPVVVVESDKADMDVETFYDGIVAVVLVP 101
>02_03_0404 +
18648632-18648669,18649319-18649379,18649449-18649476,
18649787-18649861,18649929-18649984,18650085-18650129,
18650224-18650475,18650586-18650680,18651114-18651204,
18651356-18651466,18651556-18651750,18651827-18652018
Length = 412
Score = 44.4 bits (100), Expect = 4e-05
Identities = 20/70 (28%), Positives = 38/70 (54%)
Frame = +2
Query: 230 VXMRYYSSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFET 409
V M + L + +P + ++ G++ ++ KK GD++ + + +IETDK TM +
Sbjct: 34 VFMDAHCQLGDLVDAVVPFMGESITDGTLATFLKKPGDRVEADEPIAQIETDKVTMDVAS 93
Query: 410 PEXGYLAKIL 439
PE G + K +
Sbjct: 94 PEAGIIEKFV 103
>04_03_0767 +
19389337-19389381,19390586-19390643,19390720-19390759,
19390859-19390926,19391007-19391081,19391161-19391216,
19391317-19391361,19391450-19391701,19391787-19391881,
19392395-19392485,19392578-19392688,19392788-19392982,
19393071-19393262
Length = 440
Score = 42.3 bits (95), Expect = 2e-04
Identities = 16/58 (27%), Positives = 35/58 (60%)
Frame = +2
Query: 266 IKVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEXGYLAKIL 439
++ +P + ++ G++ ++ KK GD++ + + +IETDK T+ +PE G + K +
Sbjct: 74 VEAVVPFMGESVTDGTLANFLKKPGDRVEADEPIAQIETDKVTIDVASPEAGVIEKFI 131
>01_03_0030 -
11787280-11787393,11787487-11787714,11788828-11788916,
11789516-11789763,11789858-11790146,11790295-11790454,
11791228-11791404
Length = 434
Score = 32.7 bits (71), Expect = 0.14
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +2
Query: 314 IVSWEKKEGDKLSEGDLLCEIETDKATM 397
++ W EGD++ E LCE+++DKAT+
Sbjct: 52 LLRWFVTEGDQVDEFQRLCEVQSDKATI 79
>10_03_0040 - 7307108-7307564,7307611-7307915
Length = 253
Score = 30.7 bits (66), Expect = 0.56
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +2
Query: 149 ELAKRKXTNKLLEHAQNQTVLSTPQWTVXMRYYSSLPSHIKVNLPALSPTMESG 310
E+A + +++ + + T L PQW + YSS PS++++ L +L+ + SG
Sbjct: 173 EVASGRRRSQVFDVCSSATRL--PQWRRRQQDYSSTPSNLQLRLGSLTMVISSG 224
>11_04_0312 - 16259612-16260231,16260264-16262796
Length = 1050
Score = 27.9 bits (59), Expect = 3.9
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -3
Query: 297 VGERAGRLTFICDGRLE*YLIXTVHCGVDRTVWFCACS 184
+ +R GRL D +I TV CG D+ W CA S
Sbjct: 364 IAKRCGRLPLALD------VIGTVLCGKDKRYWECALS 395
>10_03_0021 + 7129786-7130117,7130227-7130347,7131048-7131136,
7131375-7131459,7131609-7131771,7132861-7132937,
7133016-7133160,7133236-7133537,7133615-7133720,
7134781-7134935,7135556-7135712,7135799-7135891,
7136232-7136359,7136439-7136696,7136855-7137145,
7137235-7137318,7138335-7138468,7138557-7138784,
7139778-7139958,7140021-7140108,7140268-7140434,
7140750-7141012,7141117-7141120
Length = 1216
Score = 27.5 bits (58), Expect = 5.2
Identities = 13/45 (28%), Positives = 28/45 (62%)
Frame = -3
Query: 216 VDRTVWFCACSNNLFVXFLFASSVLMHLVMFXPYSFLKTIA*DLI 82
V+RTV++ + N++ F +A++ + H ++ PY ++T+ LI
Sbjct: 1017 VERTVYYRERAANMYSSFPYAAAQVYHGLVEIPYIAVQTLIFGLI 1061
>04_01_0159 -
1824343-1824405,1824485-1824595,1825282-1825448,
1825853-1826029,1826404-1826656
Length = 256
Score = 27.5 bits (58), Expect = 5.2
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 257 PSHIKVNLPA-LSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKAT 394
P + N+ A P M +GSIV + + D+LC+IET KA+
Sbjct: 80 PPAFRGNVKARYQPVMFNGSIVYCRTPSEVEKATRDILCKIETMKAS 126
>02_05_1303 +
35572403-35572624,35572744-35572860,35572987-35573112,
35573217-35573279,35573837-35573944,35574587-35574664,
35574772-35574864,35575206-35575292,35575429-35575530,
35575617-35575736,35575839-35575901,35575974-35576119,
35576203-35576296,35576399-35576457,35576568-35576607,
35576694-35576785,35576877-35576946,35578172-35578333,
35578477-35578703,35578863-35579070,35579173-35579258,
35579450-35579541,35579674-35579870
Length = 883
Score = 27.5 bits (58), Expect = 5.2
Identities = 11/43 (25%), Positives = 21/43 (48%)
Frame = +2
Query: 218 PQWTVXMRYYSSLPSHIKVNLPALSPTMESGSIVSWEKKEGDK 346
P W + M+ Y PS+ ++ +P L+ + G+ + E K
Sbjct: 325 PPWLINMQRYGPPPSYPQLKIPGLNAPIPPGASFGYRPGEWGK 367
>03_04_0006 + 16257288-16259522
Length = 744
Score = 27.1 bits (57), Expect = 6.9
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +2
Query: 281 PALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEXG 421
PA+SP+ + ++ SW+ K G L +G++ ++ TD M P G
Sbjct: 193 PAVSPSGKRVAVASWQGKPG--LWDGEIE-DLRTDIYVMNVHKPPLG 236
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,916,782
Number of Sequences: 37544
Number of extensions: 197786
Number of successful extensions: 499
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 499
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 859680288
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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