BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= epV32247 (446 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_16687| Best HMM Match : No HMM Matches (HMM E-Value=.) 110 4e-25 SB_10000| Best HMM Match : 2-oxoacid_dh (HMM E-Value=0) 73 8e-14 SB_29025| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 5e-04 SB_54467| Best HMM Match : GLTT (HMM E-Value=0.52) 32 0.25 SB_1505| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.1 SB_58702| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.059) 27 5.3 SB_53601| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.3 SB_22536| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.3 SB_17434| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.3 SB_55282| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1 SB_52201| Best HMM Match : DUF1557 (HMM E-Value=7.1) 27 7.1 SB_56564| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3 >SB_16687| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 407 Score = 110 bits (265), Expect = 4e-25 Identities = 52/71 (73%), Positives = 62/71 (87%), Gaps = 2/71 (2%) Frame = +2 Query: 239 RYYSS--LPSHIKVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETP 412 R YSS P+H KV LPALSPTME+G++VSWEK+EGD+L+EGDLL +IETDKATM FETP Sbjct: 59 RLYSSDGYPTHTKVPLPALSPTMEAGTLVSWEKQEGDELAEGDLLAQIETDKATMEFETP 118 Query: 413 EXGYLAKILIP 445 E G++AKILIP Sbjct: 119 EEGFIAKILIP 129 >SB_10000| Best HMM Match : 2-oxoacid_dh (HMM E-Value=0) Length = 382 Score = 73.3 bits (172), Expect = 8e-14 Identities = 33/49 (67%), Positives = 39/49 (79%) Frame = +2 Query: 299 MESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEXGYLAKILIP 445 ME+G+IVSW KKEGD + GD LCEIETDKAT+ +T E G LAKI+IP Sbjct: 1 METGTIVSWLKKEGDTIEPGDALCEIETDKATLTLDTDEQGVLAKIVIP 49 >SB_29025| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 431 Score = 40.7 bits (91), Expect = 5e-04 Identities = 17/60 (28%), Positives = 35/60 (58%) Frame = +2 Query: 263 HIKVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEXGYLAKILI 442 ++ VN P + ++ G I W++ GD ++E +++ EIETDK ++ P G + ++ + Sbjct: 47 YVVVNTPPFAESVTEGDI-RWDQAVGDAVAEDEVVGEIETDKTSIPVTAPANGVIEELFV 105 >SB_54467| Best HMM Match : GLTT (HMM E-Value=0.52) Length = 353 Score = 31.9 bits (69), Expect = 0.25 Identities = 17/32 (53%), Positives = 20/32 (62%), Gaps = 1/32 (3%) Frame = +1 Query: 217 TTMDCXDEVLFXSTITYKGQPSSSFANHG-EW 309 TTMDC D L ST+ Y G P S A+HG +W Sbjct: 214 TTMDCHDFPL--STMAYHGLPYYSMASHGSQW 243 Score = 28.3 bits (60), Expect = 3.1 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = +1 Query: 220 TMDCXDEVLFXSTITYKGQPSSSFANHG 303 TMDC D L +T+ Y G P S A+HG Sbjct: 321 TMDCHDLPL--TTMAYHGLPHYSMASHG 346 >SB_1505| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 92 Score = 28.3 bits (60), Expect = 3.1 Identities = 18/78 (23%), Positives = 34/78 (43%) Frame = +2 Query: 131 TRCISTELAKRKXTNKLLEHAQNQTVLSTPQWTVXMRYYSSLPSHIKVNLPALSPTMESG 310 T C+ + L + T L + +++S+PQ ++ H KV+ LS + Sbjct: 13 TDCVESPLPGKSPTETLFSSSPFLSLMSSPQLKTKQHQFTMNKLHQKVSKLQLSLDAQMH 72 Query: 311 SIVSWEKKEGDKLSEGDL 364 + E++ DK E D+ Sbjct: 73 MQATLEEELADKCKEIDV 90 >SB_58702| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.059) Length = 765 Score = 27.5 bits (58), Expect = 5.3 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = +2 Query: 275 NLPALSPTMESGSIVSWEKK 334 N P+LSPT ES + +W +K Sbjct: 558 NTPSLSPTSESAMLQNWRQK 577 >SB_53601| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 555 Score = 27.5 bits (58), Expect = 5.3 Identities = 10/28 (35%), Positives = 18/28 (64%) Frame = +2 Query: 305 SGSIVSWEKKEGDKLSEGDLLCEIETDK 388 +G ++ K GD ++EGD++ +IE K Sbjct: 526 TGKVIKVNYKAGDNVAEGDIMVQIEPVK 553 >SB_22536| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 593 Score = 27.5 bits (58), Expect = 5.3 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%) Frame = +2 Query: 185 EHAQNQTVLSTPQW---TVXMRYYSSLPSHIKVNLPALSPTMESGSIV 319 EHA T+ ST W TV M +S++ + ++ A++ T E G+ V Sbjct: 417 EHAHAHTLFSTVLWTGSTVVMPTHSAVIQLVHTHVTAIAVTPEMGAAV 464 >SB_17434| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 213 Score = 27.5 bits (58), Expect = 5.3 Identities = 16/52 (30%), Positives = 27/52 (51%) Frame = +2 Query: 182 LEHAQNQTVLSTPQWTVXMRYYSSLPSHIKVNLPALSPTMESGSIVSWEKKE 337 LE Q QT+L P W+ +Y L S + V P L P +S + +++++ Sbjct: 110 LESDQAQTILIVPNWST-QPWYPKL-SRLLVQKPILLPEKKSNIYLPFDQEK 159 >SB_55282| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1565 Score = 27.1 bits (57), Expect = 7.1 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 5/46 (10%) Frame = +3 Query: 18 AHLDGIVXXKNIDN-----VANNCVTESNLKRWS*ESYTVRTLRGA 140 A + GI K DN V + V+ + +RWS SYTVRT+ G+ Sbjct: 1228 ARISGIDLTKWKDNGRPPGVPDPTVSPPSSRRWSEWSYTVRTVTGS 1273 >SB_52201| Best HMM Match : DUF1557 (HMM E-Value=7.1) Length = 303 Score = 27.1 bits (57), Expect = 7.1 Identities = 13/48 (27%), Positives = 24/48 (50%) Frame = +2 Query: 44 QKYR*CCEQLCYGIKS*AMVLRKLYGXNITRCISTELAKRKXTNKLLE 187 ++Y C L YG K ++++LYG T I +L +K +++ Sbjct: 71 KRYNDNCTALLYGQKDTTTIVQQLYGQKDTTTIVQQLYGKKDKTTIVQ 118 >SB_56564| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 134 Score = 26.6 bits (56), Expect = 9.3 Identities = 9/24 (37%), Positives = 16/24 (66%) Frame = -3 Query: 75 HNCSQHYRYFXLXLFRPDERNGFL 4 HN +HY Y+ + RPD++N ++ Sbjct: 30 HNYQRHYPYYQDEVDRPDKKNVYV 53 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,885,823 Number of Sequences: 59808 Number of extensions: 233063 Number of successful extensions: 639 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 596 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 639 length of database: 16,821,457 effective HSP length: 76 effective length of database: 12,276,049 effective search space used: 883875528 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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