BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= epV32247 (446 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At3g52200.1 68416.m05733 dihydrolipoamide S-acetyltransferase, p... 94 4e-20 At1g54220.1 68414.m06182 dihydrolipoamide S-acetyltransferase, p... 86 9e-18 At3g13930.1 68416.m01759 dihydrolipoamide S-acetyltransferase, p... 85 3e-17 At1g34430.1 68414.m04277 dihydrolipoamide S-acetyltransferase, p... 65 2e-11 At3g25860.1 68416.m03222 dihydrolipoamide S-acetyltransferase (L... 62 1e-10 At5g55070.1 68418.m06864 2-oxoacid dehydrogenase family protein ... 43 8e-05 At3g06850.2 68416.m00813 branched chain alpha-keto acid dehydrog... 36 0.012 At3g06850.1 68416.m00812 branched chain alpha-keto acid dehydrog... 36 0.012 At2g47180.1 68415.m05892 galactinol synthase, putative similar t... 29 1.4 At5g23110.1 68418.m02703 zinc finger (C3HC4-type RING finger) fa... 29 1.9 At1g66270.2 68414.m07524 beta-glucosidase (PSR3.2) nearly identi... 29 1.9 At1g66270.1 68414.m07523 beta-glucosidase (PSR3.2) nearly identi... 29 1.9 At3g15690.2 68416.m01989 biotin carboxyl carrier protein of acet... 28 3.3 At3g15690.1 68416.m01988 biotin carboxyl carrier protein of acet... 28 3.3 At5g15530.1 68418.m01818 biotin carboxyl carrier protein 2 (BCCP... 27 4.4 At5g16390.1 68418.m01915 biotin carboxyl carrier protein 1 (BCCP... 27 7.6 >At3g52200.1 68416.m05733 dihydrolipoamide S-acetyltransferase, putative similar to dihydrolipoamide acetyltransferase (E2) subunit of PDC [Arabidopsis thaliana] GI:559395; contains Pfam profiles PF00198: 2-oxo acid dehydrogenases acyltransferase (catalytic domain), PF00364: Biotin-requiring enzyme, PF02817: e3 binding domain; supporting cDNA gi|5881964|gb|AF066080.1|AF066080 Length = 637 Score = 93.9 bits (223), Expect = 4e-20 Identities = 45/78 (57%), Positives = 55/78 (70%) Frame = +2 Query: 212 STPQWTVXMRYYSSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKA 391 ST Q + S LP H+ + +PALSPTM G+I W KKEGDK+ GD++ EIETDKA Sbjct: 195 STQQKSSIQPDASDLPPHVVLEMPALSPTMNQGNIAKWWKKEGDKIEVGDVIGEIETDKA 254 Query: 392 TMGFETPEXGYLAKILIP 445 T+ FE+ E GYLAKILIP Sbjct: 255 TLEFESLEEGYLAKILIP 272 Score = 85.8 bits (203), Expect = 1e-17 Identities = 37/55 (67%), Positives = 46/55 (83%) Frame = +2 Query: 278 LPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEXGYLAKILI 442 +PALSPTM G++V W KKEGDK+ GD+LCEIETDKAT+ FE+ E G+LAKIL+ Sbjct: 90 MPALSPTMSHGNVVKWMKKEGDKVEVGDVLCEIETDKATVEFESQEEGFLAKILV 144 >At1g54220.1 68414.m06182 dihydrolipoamide S-acetyltransferase, putative similar to dihydrolipoamide S-acetyltransferase GI:5669871 [Zea mays]; contains Pfam profiles PF00198: 2-oxo acid dehydrogenases acyltransferase (catalytic domain), PF00364: Biotin-requiring enzyme, PF02817: e3 binding domain Length = 539 Score = 86.2 bits (204), Expect = 9e-18 Identities = 37/64 (57%), Positives = 49/64 (76%) Frame = +2 Query: 248 SSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEXGYL 427 S LP H ++ +P+LSPTM G+I W KKEGDK++ G++LCE+ETDKAT+ E E GYL Sbjct: 106 SDLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVAPGEVLCEVETDKATVEMECMEEGYL 165 Query: 428 AKIL 439 AKI+ Sbjct: 166 AKIV 169 >At3g13930.1 68416.m01759 dihydrolipoamide S-acetyltransferase, putative similar to dihydrolipoamide S-acetyltransferase [Zea mays] GI:5669871; contains Pfam profiles PF00198: 2-oxo acid dehydrogenases acyltransferase (catalytic domain), PF00364: Biotin-requiring enzyme, PF02817: e3 binding domain Length = 539 Score = 84.6 bits (200), Expect = 3e-17 Identities = 36/64 (56%), Positives = 49/64 (76%) Frame = +2 Query: 248 SSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEXGYL 427 S LP H ++ +P+LSPTM G+I W KKEGDK++ G++LCE+ETDKAT+ E E G+L Sbjct: 106 SDLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVAPGEVLCEVETDKATVEMECMEEGFL 165 Query: 428 AKIL 439 AKI+ Sbjct: 166 AKIV 169 >At1g34430.1 68414.m04277 dihydrolipoamide S-acetyltransferase, putative similar to dihydrolipoamide S-acetyltransferase (LTA2) [Arabidopsis thaliana] GI:5881963; contains Pfam profiles PF00198: 2-oxo acid dehydrogenases acyltransferase (catalytic domain), PF00364: Biotin-requiring enzyme, PF02817: e3 binding domain Length = 465 Score = 65.3 bits (152), Expect = 2e-11 Identities = 30/58 (51%), Positives = 41/58 (70%) Frame = +2 Query: 269 KVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEXGYLAKILI 442 ++ +PALS TM G IVSW K EGDKL++G+ + +E+DKA M ET GYLA I++ Sbjct: 41 EIFMPALSSTMTEGKIVSWVKSEGDKLNKGESVVVVESDKADMDVETFYDGYLAAIMV 98 >At3g25860.1 68416.m03222 dihydrolipoamide S-acetyltransferase (LTA2) identical to dihydrolipoamide S-acetyltransferase (LTA2) [Arabidopsis thaliana] GI:5881963 Length = 480 Score = 62.5 bits (145), Expect = 1e-10 Identities = 29/58 (50%), Positives = 41/58 (70%) Frame = +2 Query: 269 KVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEXGYLAKILI 442 ++ +PALS TM G IVSW K EG+KL++G+ + +E+DKA M ET GYLA I++ Sbjct: 57 EIFMPALSSTMTEGKIVSWIKTEGEKLAKGESVVVVESDKADMDVETFYDGYLAAIVV 114 >At5g55070.1 68418.m06864 2-oxoacid dehydrogenase family protein similar to SP|Q01205 Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial precursor (EC 2.3.1.61) {Rattus norvegicus}; contains Pfam profiles PF00198: 2-oxo acid dehydrogenases acyltransferase (catalytic domain), PF00364: Biotin-requiring enzyme Length = 464 Score = 43.2 bits (97), Expect = 8e-05 Identities = 20/86 (23%), Positives = 46/86 (53%), Gaps = 4/86 (4%) Frame = +2 Query: 197 NQTVLSTPQWTVXMRYYSSLPSH----IKVNLPALSPTMESGSIVSWEKKEGDKLSEGDL 364 ++T+++ Q T R+ S ++ +P + ++ G++ ++ KK GD++ + Sbjct: 67 SRTIINGYQGTALQRWVRPFSSDSGDVVEAVVPHMGESITDGTLAAFLKKPGDRVEADEA 126 Query: 365 LCEIETDKATMGFETPEXGYLAKILI 442 + +IETDK T+ +P G + + L+ Sbjct: 127 IAQIETDKVTIDIASPASGVIQEFLV 152 >At3g06850.2 68416.m00813 branched chain alpha-keto acid dehydrogenase E2 subunit (din3) identical to branched chain alpha-keto acid dehydrogenase E2 subunit (din3) [Arabidopsis thaliana] GI:7021284 Length = 483 Score = 35.9 bits (79), Expect = 0.012 Identities = 16/41 (39%), Positives = 25/41 (60%) Frame = +2 Query: 314 IVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEXGYLAKI 436 ++ W KEGD + E LCE+++DKAT+ + G +A I Sbjct: 92 LLKWFVKEGDSVEEFQPLCEVQSDKATIEITSRFKGKVALI 132 >At3g06850.1 68416.m00812 branched chain alpha-keto acid dehydrogenase E2 subunit (din3) identical to branched chain alpha-keto acid dehydrogenase E2 subunit (din3) [Arabidopsis thaliana] GI:7021284 Length = 483 Score = 35.9 bits (79), Expect = 0.012 Identities = 16/41 (39%), Positives = 25/41 (60%) Frame = +2 Query: 314 IVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEXGYLAKI 436 ++ W KEGD + E LCE+++DKAT+ + G +A I Sbjct: 92 LLKWFVKEGDSVEEFQPLCEVQSDKATIEITSRFKGKVALI 132 >At2g47180.1 68415.m05892 galactinol synthase, putative similar to galactinol synthase, isoform GolS-1 GI:5608497 from [Ajuga reptans] Length = 344 Score = 29.1 bits (62), Expect = 1.4 Identities = 18/62 (29%), Positives = 25/62 (40%) Frame = +1 Query: 145 YRTGKKEXYE*IVRTCTEPDSSIYTTMDCXDEVLFXSTITYKGQPSSSFANHGEWFNC*L 324 Y G + YE I PD +Y MDC E + T YK + + +W L Sbjct: 125 YLDGDIQVYENIDHLFDLPDGYLYAVMDCFCEKTWSHTPQYKIRYCQQCPDKVQWPKAEL 184 Query: 325 GK 330 G+ Sbjct: 185 GE 186 >At5g23110.1 68418.m02703 zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger) Length = 4706 Score = 28.7 bits (61), Expect = 1.9 Identities = 14/31 (45%), Positives = 20/31 (64%) Frame = +2 Query: 266 IKVNLPALSPTMESGSIVSWEKKEGDKLSEG 358 ++V L L P + G IV+W+ K+GDKL G Sbjct: 4475 VQVQLHPLRPFYK-GEIVAWKIKQGDKLRYG 4504 >At1g66270.2 68414.m07524 beta-glucosidase (PSR3.2) nearly identical to GI:2286069 from (Arabidopsis thaliana) (Plant Mol. Biol. 34 (1), 57-68 (1997)); similar to thioglucoside glucohydrolase (GI:984052) [Arabidopsis thaliana] Length = 522 Score = 28.7 bits (61), Expect = 1.9 Identities = 14/45 (31%), Positives = 22/45 (48%) Frame = +2 Query: 230 VXMRYYSSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKLSEGDL 364 V + YY+S S+ P+ + S+VSWE K D + G + Sbjct: 339 VGLNYYTSTFSNYNEKPDPSKPSWKQDSLVSWEPKNVDHSAIGSM 383 >At1g66270.1 68414.m07523 beta-glucosidase (PSR3.2) nearly identical to GI:2286069 from (Arabidopsis thaliana) (Plant Mol. Biol. 34 (1), 57-68 (1997)); similar to thioglucoside glucohydrolase (GI:984052) [Arabidopsis thaliana] Length = 524 Score = 28.7 bits (61), Expect = 1.9 Identities = 14/45 (31%), Positives = 22/45 (48%) Frame = +2 Query: 230 VXMRYYSSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKLSEGDL 364 V + YY+S S+ P+ + S+VSWE K D + G + Sbjct: 341 VGLNYYTSTFSNYNEKPDPSKPSWKQDSLVSWEPKNVDHSAIGSM 385 >At3g15690.2 68416.m01989 biotin carboxyl carrier protein of acetyl-CoA carboxylase-related contains weak similarity to Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplast precursor (BCCP) (Swiss-Prot:Q42533) [Arabidopsis thaliana] Length = 263 Score = 27.9 bits (59), Expect = 3.3 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = +2 Query: 332 KEGDKLSEGDLLCEIETDKATMGFETPEXGYLAKIL 439 KE D++ EG +LC IE E+ G + KIL Sbjct: 201 KEKDQVKEGQILCYIEQLGGQFPIESDVTGEVVKIL 236 >At3g15690.1 68416.m01988 biotin carboxyl carrier protein of acetyl-CoA carboxylase-related contains weak similarity to Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplast precursor (BCCP) (Swiss-Prot:Q42533) [Arabidopsis thaliana] Length = 247 Score = 27.9 bits (59), Expect = 3.3 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = +2 Query: 332 KEGDKLSEGDLLCEIETDKATMGFETPEXGYLAKIL 439 KE D++ EG +LC IE E+ G + KIL Sbjct: 201 KEKDQVKEGQILCYIEQLGGQFPIESDVTGEVVKIL 236 >At5g15530.1 68418.m01818 biotin carboxyl carrier protein 2 (BCCP2) identical to biotin carboxyl carrier protein isoform 2 [Arabidopsis thaliana] gi|8886869|gb|AAF80592 Length = 255 Score = 27.5 bits (58), Expect = 4.4 Identities = 12/36 (33%), Positives = 20/36 (55%) Frame = +2 Query: 332 KEGDKLSEGDLLCEIETDKATMGFETPEXGYLAKIL 439 K GDK+ +G ++C IE K E + G + ++L Sbjct: 202 KVGDKVQKGQIVCIIEAMKLMNEIEAEKSGTIMELL 237 >At5g16390.1 68418.m01915 biotin carboxyl carrier protein 1 (BCCP1) identical to biotin carboxyl carrier protein of acetyl-CoA carboxylase precursor [Arabidopsis thaliana] gi|9759121|dbj|BAB09606 Length = 280 Score = 26.6 bits (56), Expect = 7.6 Identities = 12/36 (33%), Positives = 19/36 (52%) Frame = +2 Query: 332 KEGDKLSEGDLLCEIETDKATMGFETPEXGYLAKIL 439 K GDK+ +G +LC +E K E+ G + I+ Sbjct: 227 KVGDKVQKGQVLCIVEAMKLMNEIESDHTGTVVDIV 262 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 9,080,352 Number of Sequences: 28952 Number of extensions: 166873 Number of successful extensions: 436 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 429 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 436 length of database: 12,070,560 effective HSP length: 75 effective length of database: 9,899,160 effective search space used: 722638680 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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