Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32245
         (391 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr...    28   2.0  
AB009362-1|BAA23766.1|  118|Caenorhabditis elegans protein ( Cae...    28   2.0  
Z30215-5|CAA82938.1|  199|Caenorhabditis elegans Hypothetical pr...    27   3.6  
AF016445-2|AAC69064.1|  376|Caenorhabditis elegans Serpentine re...    27   3.6  
Z81093-2|CAB03146.1|  545|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z79598-7|CAB01866.1|  386|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z54216-3|CAA90944.2|  337|Caenorhabditis elegans Hypothetical pr...    27   6.2  
AF145375-1|AAD39814.1|  386|Caenorhabditis elegans TAB1-like pro...    27   6.2  
Z81529-2|CAB04298.2|  133|Caenorhabditis elegans Hypothetical pr...    26   8.2  
Z30215-7|CAA82940.1|  322|Caenorhabditis elegans Hypothetical pr...    26   8.2  
Z29560-13|CAA82665.1|  322|Caenorhabditis elegans Hypothetical p...    26   8.2  

>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical
           protein R10E11.1a protein.
          Length = 2045

 Score = 28.3 bits (60), Expect = 2.0
 Identities = 17/58 (29%), Positives = 27/58 (46%)
 Frame = -3

Query: 347 LPHDYQNKQRQ*QPNDSRSHRHYPSFHSPIALVHCRASVLPLKITTHQVLGRILHFLH 174
           L H ++  QR+ +  D  + ++ P  H+   L HC      L   T   +GR+ HF H
Sbjct: 413 LLHAHKCSQREKENRDFAA-KNQPPPHAACTLPHCSTMKEVLTHMTSCNVGRLCHFAH 469


>AB009362-1|BAA23766.1|  118|Caenorhabditis elegans protein (
           Caenorhabditis elegansmRNA, partial cds. ).
          Length = 118

 Score = 28.3 bits (60), Expect = 2.0
 Identities = 17/58 (29%), Positives = 27/58 (46%)
 Frame = -3

Query: 347 LPHDYQNKQRQ*QPNDSRSHRHYPSFHSPIALVHCRASVLPLKITTHQVLGRILHFLH 174
           L H ++  QR+ +  D  + ++ P  H+   L HC      L   T   +GR+ HF H
Sbjct: 17  LLHAHKCSQREKENRDFAA-KNQPPPHAACTLPHCSTMKEVLTHMTSCNVGRLCHFAH 73


>Z30215-5|CAA82938.1|  199|Caenorhabditis elegans Hypothetical
           protein F40F12.7 protein.
          Length = 199

 Score = 27.5 bits (58), Expect = 3.6
 Identities = 18/61 (29%), Positives = 30/61 (49%)
 Frame = -3

Query: 356 YVDLPHDYQNKQRQ*QPNDSRSHRHYPSFHSPIALVHCRASVLPLKITTHQVLGRILHFL 177
           +V L H ++  QR+ + N+  + R+    H+   L HC      L   T+  +GR+ HF 
Sbjct: 18  FVLLLHAHKCSQRE-KENNEFAARNQLLPHAACTLPHCSTMKEVLIHMTNCNVGRLCHFA 76

Query: 176 H 174
           H
Sbjct: 77  H 77


>AF016445-2|AAC69064.1|  376|Caenorhabditis elegans Serpentine
           receptor, class w protein134 protein.
          Length = 376

 Score = 27.5 bits (58), Expect = 3.6
 Identities = 12/46 (26%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
 Frame = -3

Query: 302 DSRSHRHYPSFHSPIALVHCRAS----VLPLKITTHQVLGRILHFL 177
           D + H++YP F    A++ CR       +  +IT+++ +  ++ FL
Sbjct: 5   DIQFHQYYPKFQKKTAIILCRFQENFVAIVTQITSYEYIASVVCFL 50


>Z81093-2|CAB03146.1|  545|Caenorhabditis elegans Hypothetical
           protein F58D2.1 protein.
          Length = 545

 Score = 26.6 bits (56), Expect = 6.2
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = -1

Query: 295 AVTVTTQAFIRRSHLFIVGPPYCLSKSPPIKFLDASFTSFMVSFCVYIV 149
           AV ++   FIR S+   +    C    P ++F+D S T   V    Y++
Sbjct: 168 AVDISETRFIRESNNNTIMYVACQKVLPELRFIDCSRTMMSVELLEYLL 216


>Z79598-7|CAB01866.1|  386|Caenorhabditis elegans Hypothetical
           protein C44H4.5 protein.
          Length = 386

 Score = 26.6 bits (56), Expect = 6.2
 Identities = 23/94 (24%), Positives = 38/94 (40%), Gaps = 1/94 (1%)
 Frame = -1

Query: 343 LTITRTSNANSSPMIVAVTVTTQAFIRRSHLFIVGPPYCLSKSPP-IKFLDASFTSFMVS 167
           L I R      +P  V         ++R+HLF     +  +K PP I   D  +T    S
Sbjct: 188 LEIVRIKGLGINPETVLNPTRAIGDLQRTHLFEETEAFKNAKGPPVISTPDVQYTKIDPS 247

Query: 166 FCVYIVIGSGMSACFSAITVLTLHPRTVDVTVID 65
           +   ++I  G+      + V  + P  V V +I+
Sbjct: 248 WRHLVLISDGVVQNLKEVEVENI-PTEVSVRLIE 280


>Z54216-3|CAA90944.2|  337|Caenorhabditis elegans Hypothetical
           protein T24H10.4 protein.
          Length = 337

 Score = 26.6 bits (56), Expect = 6.2
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -3

Query: 272 FHSPIALVHCRASVLPLKITTHQVLGRILH 183
           F +PIA +   +S  P  +  H++L  ILH
Sbjct: 93  FTAPIAKIRSFSSYRPFALCFHRILNEILH 122


>AF145375-1|AAD39814.1|  386|Caenorhabditis elegans TAB1-like
           protein TAP-1 protein.
          Length = 386

 Score = 26.6 bits (56), Expect = 6.2
 Identities = 23/94 (24%), Positives = 38/94 (40%), Gaps = 1/94 (1%)
 Frame = -1

Query: 343 LTITRTSNANSSPMIVAVTVTTQAFIRRSHLFIVGPPYCLSKSPP-IKFLDASFTSFMVS 167
           L I R      +P  V         ++R+HLF     +  +K PP I   D  +T    S
Sbjct: 188 LEIVRIKGLGINPETVLNPTRAIGDLQRTHLFEETEAFKNAKGPPVISTPDVQYTKIDPS 247

Query: 166 FCVYIVIGSGMSACFSAITVLTLHPRTVDVTVID 65
           +   ++I  G+      + V  + P  V V +I+
Sbjct: 248 WRHLVLISDGVVQNLKEVEVENI-PTEVSVRLIE 280


>Z81529-2|CAB04298.2|  133|Caenorhabditis elegans Hypothetical
           protein F35E8.2 protein.
          Length = 133

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = -1

Query: 211 PIKFLDASFTSFMVSFCVYIVIGSGMSACFSAITVLTLHPRTVDVTVIDYDRYSLSGHHQ 32
           PI+ LD S TSF  +  ++    +G S   S  +   L+P  V       D Y  SG  Q
Sbjct: 15  PIQLLDLSCTSFNGTAFIWTPAATGCSNVISDSSCAVLYPAPVPA-----DGYLSSGKDQ 69

Query: 31  KK 26
           ++
Sbjct: 70  QR 71


>Z30215-7|CAA82940.1|  322|Caenorhabditis elegans Hypothetical
           protein K03H1.10 protein.
          Length = 322

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -3

Query: 305 NDSRSHRHYPSFHSPIALVHCRASVLPLKITTHQVLGRILHFLH 174
           N+  + R+ P  H+   L HC      L   T+  +GR+ HF H
Sbjct: 34  NNEFAARNQPLPHTTCRLPHCPTMKEVLIHMTNCNVGRLCHFAH 77


>Z29560-13|CAA82665.1|  322|Caenorhabditis elegans Hypothetical
           protein K03H1.10 protein.
          Length = 322

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -3

Query: 305 NDSRSHRHYPSFHSPIALVHCRASVLPLKITTHQVLGRILHFLH 174
           N+  + R+ P  H+   L HC      L   T+  +GR+ HF H
Sbjct: 34  NNEFAARNQPLPHTTCRLPHCPTMKEVLIHMTNCNVGRLCHFAH 77


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,809,580
Number of Sequences: 27780
Number of extensions: 178210
Number of successful extensions: 602
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 602
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 587646290
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)