Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32243
         (410 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       26   0.17 
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    26   0.17 
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    26   0.17 
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    26   0.17 
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   2.7  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   6.2  

>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 25.8 bits (54), Expect = 0.17
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +1

Query: 151 EITKELRIADERYQRVQTELKHTVEHLHEEQERIVKIE 264
           ++ KELR   E  ++ + E +    H  ++QE+  KIE
Sbjct: 60  KLKKELRAVKEINEQARREREEQERHKQQQQEKQQKIE 97


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 25.8 bits (54), Expect = 0.17
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = +1

Query: 202 TELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNI 303
           TEL  ++E L E   + ++IE V+++L  E+K +
Sbjct: 742 TELSKSLEGLLENVAQYLQIENVEQTLNHEIKKV 775


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 25.8 bits (54), Expect = 0.17
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +1

Query: 151 EITKELRIADERYQRVQTELKHTVEHLHEEQERIVKIE 264
           ++ KELR   E  ++ + E +    H  ++QE+  KIE
Sbjct: 211 KLKKELRAVKEINEQARREREEQERHKQQQQEKQQKIE 248


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 25.8 bits (54), Expect = 0.17
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +1

Query: 151 EITKELRIADERYQRVQTELKHTVEHLHEEQERIVKIE 264
           ++ KELR   E  ++ + E +    H  ++QE+  KIE
Sbjct: 270 KLKKELRAVKEINEQARREREEQERHKQQQQEKQQKIE 307


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +2

Query: 128 LSSPPTTMRSPRNSASPMRDTSAYRLS*NTLSSICM 235
           L S  TTM +  N+ SPM  T  Y +  N++S + M
Sbjct: 6   LYSDSTTMATSSNAMSPM--TPTYSM--NSMSCVSM 37


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 278 DFLTASILTILSC 240
           DF   +ILT LSC
Sbjct: 73  DFTVQNILTFLSC 85


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,469
Number of Sequences: 336
Number of extensions: 1023
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8963165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)