BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= epV32242 (516 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_7745| Best HMM Match : Lectin_C (HMM E-Value=4.2e-05) 33 0.18 SB_50285| Best HMM Match : SAP (HMM E-Value=0.0036) 28 4.0 SB_49328| Best HMM Match : DUF1091 (HMM E-Value=1.6) 28 4.0 SB_484| Best HMM Match : bZIP_1 (HMM E-Value=1.4) 28 4.0 SB_35277| Best HMM Match : WIF (HMM E-Value=9.8e-06) 28 5.3 SB_6206| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3 >SB_7745| Best HMM Match : Lectin_C (HMM E-Value=4.2e-05) Length = 322 Score = 32.7 bits (71), Expect = 0.18 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = +3 Query: 300 NIYTLGI*CFYERLFCNVXDIYLYYLLPWSMYRECERVRRMH 425 N YT+ I C+Y + C V +YL++ L + +ECE H Sbjct: 158 NTYTILILCYYPAILCIVKPVYLFFGL--GVDKECESCYSFH 197 >SB_50285| Best HMM Match : SAP (HMM E-Value=0.0036) Length = 1136 Score = 28.3 bits (60), Expect = 4.0 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = -1 Query: 384 TVINNINKYXQRYKIAFRKNIRSLKCI 304 T++ + N+Y Q Y+ F SLKCI Sbjct: 179 TMVTSENEYVQEYRARFEIKTNSLKCI 205 >SB_49328| Best HMM Match : DUF1091 (HMM E-Value=1.6) Length = 555 Score = 28.3 bits (60), Expect = 4.0 Identities = 12/40 (30%), Positives = 20/40 (50%) Frame = +1 Query: 139 WRPKISKRSTTKHKNGLYRFFVENVTFYTLAVDDERKTVK 258 + P K T KH GL+ + ++T + DER+ V+ Sbjct: 174 YEPAAMKAFTQKHSPGLFEMLLSSITREDSRLSDERQAVQ 213 >SB_484| Best HMM Match : bZIP_1 (HMM E-Value=1.4) Length = 263 Score = 28.3 bits (60), Expect = 4.0 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = -1 Query: 384 TVINNINKYXQRYKIAFRKNIRSLKCI 304 T++ + N+Y Q Y+ F SLKCI Sbjct: 179 TMVTSENEYVQEYRARFEIKTNSLKCI 205 >SB_35277| Best HMM Match : WIF (HMM E-Value=9.8e-06) Length = 587 Score = 27.9 bits (59), Expect = 5.3 Identities = 15/44 (34%), Positives = 26/44 (59%) Frame = +1 Query: 373 IYYRGVCIESASECVGCTCAREHRRDTPPTFVPXTRTCTPRTLH 504 ++YR + + S+ +C+G T RE DTP T+ + TPR ++ Sbjct: 161 VFYR-MRVPSSVDCLGFTWFRE---DTPTTYSILIESLTPRLVY 200 >SB_6206| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 397 Score = 27.9 bits (59), Expect = 5.3 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 2/39 (5%) Frame = +1 Query: 148 KISKRS-TTKHKNGLYRFFVENVTFYTLAVDDER-KTVK 258 KIS +S T KHK L R ++ FYT D + KT+K Sbjct: 34 KISTKSKTAKHKKDLSRLQKKDPEFYTFLQDKSKSKTIK 72 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,823,938 Number of Sequences: 59808 Number of extensions: 262281 Number of successful extensions: 690 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 638 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 690 length of database: 16,821,457 effective HSP length: 77 effective length of database: 12,216,241 effective search space used: 1148326654 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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