BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= epV32242 (516 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren... 24 2.6 AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 24 2.6 EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc... 24 3.5 CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos... 23 6.1 AY578798-1|AAT07303.1| 356|Anopheles gambiae baboon protein. 23 8.1 >DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methoprene-tolerant protein protein. Length = 1115 Score = 24.2 bits (50), Expect = 2.6 Identities = 10/17 (58%), Positives = 11/17 (64%) Frame = +3 Query: 78 PQRSRPALADGFGTFPP 128 P SR A ADG G+ PP Sbjct: 769 PSPSRSAFADGIGSPPP 785 >AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase protein. Length = 1154 Score = 24.2 bits (50), Expect = 2.6 Identities = 13/32 (40%), Positives = 15/32 (46%) Frame = +2 Query: 5 RRXGHQQVPRQGTRGICSERSQPGAPALAPRP 100 R HQQ R+G G ER + P LA P Sbjct: 1100 RHRQHQQDERRGVEGGDIERGESVYPELASSP 1131 >EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium channel alpha2-delta subunit 1 protein. Length = 1256 Score = 23.8 bits (49), Expect = 3.5 Identities = 10/26 (38%), Positives = 15/26 (57%) Frame = +2 Query: 17 HQQVPRQGTRGICSERSQPGAPALAP 94 +++VP +GICS+R P A P Sbjct: 993 YRRVPLMDYQGICSDRDNPYTGAGEP 1018 >CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon polyprotein protein. Length = 1726 Score = 23.0 bits (47), Expect = 6.1 Identities = 13/54 (24%), Positives = 21/54 (38%) Frame = +1 Query: 349 TLXIFIYIIYYRGVCIESASECVGCTCAREHRRDTPPTFVPXTRTCTPRTLHLT 510 T+ + +I+ R V + CV CT R P +P R R ++ Sbjct: 1372 TMQLRFWIVGARNVAKRTVFNCVKCTRCRPKLIQQPMADLPEQRVRQARPFSIS 1425 >AY578798-1|AAT07303.1| 356|Anopheles gambiae baboon protein. Length = 356 Score = 22.6 bits (46), Expect = 8.1 Identities = 10/29 (34%), Positives = 16/29 (55%) Frame = +3 Query: 300 NIYTLGI*CFYERLFCNVXDIYLYYLLPW 386 ++Y LG+ + CNV +Y Y LP+ Sbjct: 254 DVYALGLVLWEIARRCNVDGVYDEYQLPF 282 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 465,019 Number of Sequences: 2352 Number of extensions: 9000 Number of successful extensions: 19 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 19 length of database: 563,979 effective HSP length: 60 effective length of database: 422,859 effective search space used: 46937349 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -