Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32242
         (516 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   2.6  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    24   2.6  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    24   3.5  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   6.1  
AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          23   8.1  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +3

Query: 78  PQRSRPALADGFGTFPP 128
           P  SR A ADG G+ PP
Sbjct: 769 PSPSRSAFADGIGSPPP 785


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +2

Query: 5    RRXGHQQVPRQGTRGICSERSQPGAPALAPRP 100
            R   HQQ  R+G  G   ER +   P LA  P
Sbjct: 1100 RHRQHQQDERRGVEGGDIERGESVYPELASSP 1131


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
            channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.8 bits (49), Expect = 3.5
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 17   HQQVPRQGTRGICSERSQPGAPALAP 94
            +++VP    +GICS+R  P   A  P
Sbjct: 993  YRRVPLMDYQGICSDRDNPYTGAGEP 1018


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 13/54 (24%), Positives = 21/54 (38%)
 Frame = +1

Query: 349  TLXIFIYIIYYRGVCIESASECVGCTCAREHRRDTPPTFVPXTRTCTPRTLHLT 510
            T+ +  +I+  R V   +   CV CT  R      P   +P  R    R   ++
Sbjct: 1372 TMQLRFWIVGARNVAKRTVFNCVKCTRCRPKLIQQPMADLPEQRVRQARPFSIS 1425


>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 300 NIYTLGI*CFYERLFCNVXDIYLYYLLPW 386
           ++Y LG+  +     CNV  +Y  Y LP+
Sbjct: 254 DVYALGLVLWEIARRCNVDGVYDEYQLPF 282


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 465,019
Number of Sequences: 2352
Number of extensions: 9000
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)