BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= epV32242 (516 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z99171-2|CAB16314.1| 710|Caenorhabditis elegans Hypothetical pr... 29 2.0 Z73976-2|CAA98285.1| 360|Caenorhabditis elegans Hypothetical pr... 27 6.0 U00055-6|AAA50724.1| 494|Caenorhabditis elegans Hypothetical pr... 27 8.0 AF067214-3|AAC17002.1| 211|Caenorhabditis elegans Hypothetical ... 27 8.0 AC024790-10|AAF60632.2| 129|Caenorhabditis elegans Hypothetical... 27 8.0 AC024790-5|AAF60640.2| 119|Caenorhabditis elegans Hypothetical ... 27 8.0 AC024790-4|AAF60636.1| 121|Caenorhabditis elegans Hypothetical ... 27 8.0 >Z99171-2|CAB16314.1| 710|Caenorhabditis elegans Hypothetical protein F47G4.2 protein. Length = 710 Score = 29.1 bits (62), Expect = 2.0 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = +3 Query: 255 KILNMQFFFFCKPNKNIYTLGI 320 K+LN FF FCK N+Y+L I Sbjct: 148 KLLNPDFFQFCKSFPNLYSLDI 169 >Z73976-2|CAA98285.1| 360|Caenorhabditis elegans Hypothetical protein T07C12.6 protein. Length = 360 Score = 27.5 bits (58), Expect = 6.0 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = -1 Query: 273 IAYLVFYSFSLIINS*CIKSYV 208 I L+FY F+ INS C+K Y+ Sbjct: 34 ITELIFYFFAFYINSVCLKVYL 55 >U00055-6|AAA50724.1| 494|Caenorhabditis elegans Hypothetical protein R02F2.8 protein. Length = 494 Score = 27.1 bits (57), Expect = 8.0 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = -1 Query: 171 CSGTFRNLRAPGRT*VGRC 115 C GTFRNL G+ +G C Sbjct: 471 CCGTFRNLTVSGQNPIGYC 489 >AF067214-3|AAC17002.1| 211|Caenorhabditis elegans Hypothetical protein F56C3.5 protein. Length = 211 Score = 27.1 bits (57), Expect = 8.0 Identities = 11/33 (33%), Positives = 18/33 (54%) Frame = +1 Query: 124 HLGSTWRPKISKRSTTKHKNGLYRFFVENVTFY 222 H P+I KR + K+ NG++ F+ + FY Sbjct: 170 HCSENMGPEI-KRMSIKYNNGIFYLFINLIDFY 201 >AC024790-10|AAF60632.2| 129|Caenorhabditis elegans Hypothetical protein Y47D7A.11 protein. Length = 129 Score = 27.1 bits (57), Expect = 8.0 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = +2 Query: 455 PPPSYRTPARAPHAPS 502 PPPSY TP + P AP+ Sbjct: 35 PPPSYPTPKKYPVAPT 50 >AC024790-5|AAF60640.2| 119|Caenorhabditis elegans Hypothetical protein Y47D7A.2 protein. Length = 119 Score = 27.1 bits (57), Expect = 8.0 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = +2 Query: 455 PPPSYRTPARAPHAPS 502 PPPSY TP + P AP+ Sbjct: 35 PPPSYPTPKKYPVAPT 50 >AC024790-4|AAF60636.1| 121|Caenorhabditis elegans Hypothetical protein Y47D7A.7 protein. Length = 121 Score = 27.1 bits (57), Expect = 8.0 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = +2 Query: 455 PPPSYRTPARAPHAPS 502 PPPSY TP + P AP+ Sbjct: 35 PPPSYPTPKKYPVAPT 50 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,316,115 Number of Sequences: 27780 Number of extensions: 209433 Number of successful extensions: 705 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 679 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 705 length of database: 12,740,198 effective HSP length: 77 effective length of database: 10,601,138 effective search space used: 996506972 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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