Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32237
(516 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC577.12 |mug71||endoribonuclease |Schizosaccharomyces pombe|c... 29 0.55
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 29 0.55
SPBC31F10.16 |||ChAPs family protein|Schizosaccharomyces pombe|c... 26 3.8
SPAC24H6.03 |cul3|pcu3|cullin 3|Schizosaccharomyces pombe|chr 1|... 25 5.1
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 25 5.1
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 25 6.7
SPBC685.02 |||conserved eukaryotic protein|Schizosaccharomyces p... 25 6.7
SPAC19A8.03 |||phosphatidylinositol-3-phosphatase |Schizosacchar... 25 6.7
SPCC1020.09 |||WD repeat protein, human WDR79 family|Schizosacch... 25 8.9
SPCC1259.11c |gyp2||GTPase activating protein Gyp2 |Schizosaccha... 25 8.9
SPAC7D4.11c |sec39||secretory pathway protein Sec39 |Schizosacch... 25 8.9
>SPBC577.12 |mug71||endoribonuclease |Schizosaccharomyces pombe|chr
2|||Manual
Length = 606
Score = 28.7 bits (61), Expect = 0.55
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 334 NIPTIKTGYESFDKYEDQIISIINDLKNTYGFNN 435
N+ K Y +F + I+ +N+L TYG++N
Sbjct: 312 NVVATKGSYNTFQGEAESAINNLNELLGTYGYSN 345
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 28.7 bits (61), Expect = 0.55
Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 4/113 (3%)
Frame = +1
Query: 136 SNAKTYKDIVVPLVSHLIDSLKSKHITDVKVFLVGHTSKYPYPILYDTDLK--LKNAHVH 309
S AK+ + P +SH +DS KS +D+ + HT+ Y L T KN
Sbjct: 201 SRAKSTESTSSPELSHSLDSSKS-IASDMPIHRASHTTGYAAASLTSTSFTPVTKNERAI 259
Query: 310 FDDKERYNNIPTIK-TGYESFDKYEDQI-ISIINDLKNTYGFNNIEASKQSLF 462
+++ N IK GY +I I + D +N ++ +KQ +
Sbjct: 260 IAEEDYMLNHTRIKHKGYARIVTNHGEINIELHTDYAPHAVYNFVQLAKQGYY 312
>SPBC31F10.16 |||ChAPs family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 679
Score = 25.8 bits (54), Expect = 3.8
Identities = 17/68 (25%), Positives = 28/68 (41%)
Frame = +1
Query: 178 SHLIDSLKSKHITDVKVFLVGHTSKYPYPILYDTDLKLKNAHVHFDDKERYNNIPTIKTG 357
++ ID KHI D +++ + S+ +LY D + F R+N IP
Sbjct: 155 TYAIDENGQKHIVDARMWTEAYMSEVLRSLLYSDD-----TNSRFAGHRRFNPIPNPDAE 209
Query: 358 YESFDKYE 381
F+ E
Sbjct: 210 LRFFEAAE 217
>SPAC24H6.03 |cul3|pcu3|cullin 3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 785
Score = 25.4 bits (53), Expect = 5.1
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 97 KQADIILSVETTESNAKTYKDIVVPLVSHLIDSLKSKHITDV 222
K+A+ E S + I PL+S + D L SKH+ D+
Sbjct: 258 KKAEKRFEEEKERSKNYLFTKIASPLLSVVEDELLSKHLDDL 299
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 25.4 bits (53), Expect = 5.1
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 307 HFDDKERYNNIPTIKTGYESFDKYEDQIISIINDLKNTYG 426
+FD + Y+ IP+ TG SF + D I TYG
Sbjct: 962 NFDFRRPYSVIPSRMTGRSSFTQLSDDSDETIILASATYG 1001
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 25.0 bits (52), Expect = 6.7
Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +1
Query: 190 DSLKSKHITDVKVFLVGHTSKYPYPILYDTDLKLKNAHVHFDDKERYNNIPTIKTGYESF 369
+SLK +I + K+F + H+++Y + Y DL N + + T+ +
Sbjct: 502 NSLKELNIANNKLFFLPHSTRYLVNLTY-LDLSYNNFVTFPLIITELSQLETLNFSHNLL 560
Query: 370 DKYEDQIISIINDLKNTY-GFNNI 438
+ +I S++ LK+ Y FN++
Sbjct: 561 SQISSKIGSLVK-LKHLYLQFNDL 583
>SPBC685.02 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 409
Score = 25.0 bits (52), Expect = 6.7
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -3
Query: 382 PRICRRIHTQS*WWGCYCS 326
P R+H+QS WW + S
Sbjct: 256 PTYSNRLHSQSHWWNMFLS 274
>SPAC19A8.03 |||phosphatidylinositol-3-phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 559
Score = 25.0 bits (52), Expect = 6.7
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +1
Query: 313 DDKERYNNIPTIKTGYESFDKYEDQIISIINDLKNTYGFNNIEASKQSLFDLXVRPGAIK 492
++ + Y I G ++ D + I+N LKNT +I A+ L +L R +K
Sbjct: 261 ENMDHYRFAKKIYLGIDNIHVMRDSLNKIVNALKNT----DISAA-PPLIELLNRSSWLK 315
Query: 493 HL 498
HL
Sbjct: 316 HL 317
>SPCC1020.09 |||WD repeat protein, human WDR79
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 399
Score = 24.6 bits (51), Expect = 8.9
Identities = 22/89 (24%), Positives = 38/89 (42%)
Frame = +1
Query: 22 TYASSVLMQISRGTSEYSYEFKVPNKQADIILSVETTESNAKTYKDIVVPLVSHLIDSLK 201
TY++ V + G EF + ++ + + ++ E K Y V S I+
Sbjct: 229 TYSNRVGIYNDCGRRPCQLEFSI--ERGNGVTHLQWCEDGEKLY---VGSRCSDKIEVWD 283
Query: 202 SKHITDVKVFLVGHTSKYPYPILYDTDLK 288
+++ D+ L GH IL+DTD K
Sbjct: 284 IRYVRDMVYALEGHRGDTNQRILFDTDKK 312
>SPCC1259.11c |gyp2||GTPase activating protein Gyp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 720
Score = 24.6 bits (51), Expect = 8.9
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -3
Query: 211 CVYSLDCQSNVTRAVPRYP 155
C YS + + ++TR++P YP
Sbjct: 255 CEYSEEIEKDLTRSLPDYP 273
>SPAC7D4.11c |sec39||secretory pathway protein Sec39
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 769
Score = 24.6 bits (51), Expect = 8.9
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = -2
Query: 224 LTSVMCLLFRLSIKCDTSGTTISL*VFALDSVVSTDRIISACLLGTLNS*LYSD 63
+T + LL +L + T T++S+ DS + + LGT+ S Y D
Sbjct: 338 ITKAIALLTQLKVPAPTFKTSVSISCSNFDSQIKYLENVLLNALGTIQSPDYKD 391
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.135 0.383
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,209,828
Number of Sequences: 5004
Number of extensions: 45888
Number of successful extensions: 130
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 130
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 208287218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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