Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32237
(516 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y00831-1|CAA68761.1| 56|Drosophila melanogaster structural spe... 28 6.5
M27431-1|AAA28868.1| 1896|Drosophila melanogaster protein ( D.me... 28 6.5
M19537-1|AAA28827.1| 408|Drosophila melanogaster RNA polymerase... 28 6.5
AY089555-1|AAL90293.1| 1429|Drosophila melanogaster LD43558p pro... 28 6.5
AM294198-1|CAL26102.1| 56|Drosophila melanogaster CG17956 prot... 28 6.5
AM294197-1|CAL26101.1| 56|Drosophila melanogaster CG17956 prot... 28 6.5
AM294196-1|CAL26100.1| 60|Drosophila melanogaster CG17956 prot... 28 6.5
AM294195-1|CAL26099.1| 56|Drosophila melanogaster CG17956 prot... 28 6.5
AM294194-1|CAL26098.1| 56|Drosophila melanogaster CG17956 prot... 28 6.5
AM294193-1|CAL26097.1| 56|Drosophila melanogaster CG17956 prot... 28 6.5
AM294192-1|CAL26096.1| 56|Drosophila melanogaster CG17956 prot... 28 6.5
AM294191-1|CAL26095.1| 56|Drosophila melanogaster CG17956 prot... 28 6.5
AM294190-1|CAL26094.1| 56|Drosophila melanogaster CG17956 prot... 28 6.5
AM294189-1|CAL26093.1| 56|Drosophila melanogaster CG17956 prot... 28 6.5
AM294188-1|CAL26092.1| 56|Drosophila melanogaster CG17956 prot... 28 6.5
AM294187-1|CAL26091.1| 56|Drosophila melanogaster CG17956 prot... 28 6.5
AE014298-1637|AAF48057.1| 1887|Drosophila melanogaster CG1554-PA... 28 6.5
AE014297-1766|AAF54994.1| 56|Drosophila melanogaster CG17956-P... 28 6.5
BT022917-1|AAY55333.1| 158|Drosophila melanogaster IP04421p pro... 28 8.6
BT022334-1|AAY54750.1| 193|Drosophila melanogaster IP04521p pro... 28 8.6
BT001374-1|AAN71129.1| 697|Drosophila melanogaster GH01059p pro... 28 8.6
AY089558-1|AAL90296.1| 1063|Drosophila melanogaster LD45706p pro... 28 8.6
AJ249178-1|CAB53566.1| 1063|Drosophila melanogaster chromosomal ... 28 8.6
AF190557-1|AAF01341.1| 1063|Drosophila melanogaster chromosomal ... 28 8.6
AF179361-2|AAD55780.1| 1063|Drosophila melanogaster embargoed pr... 28 8.6
AF179360-1|AAD55778.1| 1063|Drosophila melanogaster embargoed pr... 28 8.6
AE014134-1501|AAG22423.2| 1063|Drosophila melanogaster CG13387-P... 28 8.6
AE013599-2807|AAF57607.2| 193|Drosophila melanogaster CG15116-P... 28 8.6
>Y00831-1|CAA68761.1| 56|Drosophila melanogaster structural sperm
protein protein.
Length = 56
Score = 28.3 bits (60), Expect = 6.5
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -3
Query: 388 FGPRICRRIHTQS*WWGCYCSVPC 317
+GP +C + GCYC PC
Sbjct: 32 YGPNVCGPCYACGPCGGCYCGYPC 55
>M27431-1|AAA28868.1| 1896|Drosophila melanogaster protein (
D.melanogaster RpII215gene encoding RNA polymerase II,
largest subunit, completecds. ).
Length = 1896
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 248 PNIHIRSCMTLTSN*KTPTYTSTTRNATITSP 343
PN+ I S + + +PTYT T RN + TSP
Sbjct: 1829 PNMSIYSPSSTKYSPTSPTYTPTARNYSPTSP 1860
>M19537-1|AAA28827.1| 408|Drosophila melanogaster RNA polymerase II
largest subunit protein.
Length = 408
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 248 PNIHIRSCMTLTSN*KTPTYTSTTRNATITSP 343
PN+ I S + + +PTYT T RN + TSP
Sbjct: 348 PNMSIYSPSSTKYSPTSPTYTPTARNYSPTSP 379
>AY089555-1|AAL90293.1| 1429|Drosophila melanogaster LD43558p protein.
Length = 1429
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 248 PNIHIRSCMTLTSN*KTPTYTSTTRNATITSP 343
PN+ I S + + +PTYT T RN + TSP
Sbjct: 1369 PNMSIYSPSSTKYSPTSPTYTPTARNYSPTSP 1400
>AM294198-1|CAL26102.1| 56|Drosophila melanogaster CG17956
protein.
Length = 56
Score = 28.3 bits (60), Expect = 6.5
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -3
Query: 388 FGPRICRRIHTQS*WWGCYCSVPC 317
+GP +C + GCYC PC
Sbjct: 32 YGPNVCGPCYACGPCGGCYCGYPC 55
>AM294197-1|CAL26101.1| 56|Drosophila melanogaster CG17956
protein.
Length = 56
Score = 28.3 bits (60), Expect = 6.5
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -3
Query: 388 FGPRICRRIHTQS*WWGCYCSVPC 317
+GP +C + GCYC PC
Sbjct: 32 YGPNVCGPCYACGPCGGCYCGYPC 55
>AM294196-1|CAL26100.1| 60|Drosophila melanogaster CG17956
protein.
Length = 60
Score = 28.3 bits (60), Expect = 6.5
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -3
Query: 388 FGPRICRRIHTQS*WWGCYCSVPC 317
+GP +C + GCYC PC
Sbjct: 36 YGPNVCGPCYACGPCGGCYCGYPC 59
>AM294195-1|CAL26099.1| 56|Drosophila melanogaster CG17956
protein.
Length = 56
Score = 28.3 bits (60), Expect = 6.5
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -3
Query: 388 FGPRICRRIHTQS*WWGCYCSVPC 317
+GP +C + GCYC PC
Sbjct: 32 YGPNVCGPCYACGPCGGCYCGYPC 55
>AM294194-1|CAL26098.1| 56|Drosophila melanogaster CG17956
protein.
Length = 56
Score = 28.3 bits (60), Expect = 6.5
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -3
Query: 388 FGPRICRRIHTQS*WWGCYCSVPC 317
+GP +C + GCYC PC
Sbjct: 32 YGPNVCGPCYACGPCGGCYCGYPC 55
>AM294193-1|CAL26097.1| 56|Drosophila melanogaster CG17956
protein.
Length = 56
Score = 28.3 bits (60), Expect = 6.5
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -3
Query: 388 FGPRICRRIHTQS*WWGCYCSVPC 317
+GP +C + GCYC PC
Sbjct: 32 YGPNVCGPCYACGPCGGCYCGYPC 55
>AM294192-1|CAL26096.1| 56|Drosophila melanogaster CG17956
protein.
Length = 56
Score = 28.3 bits (60), Expect = 6.5
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -3
Query: 388 FGPRICRRIHTQS*WWGCYCSVPC 317
+GP +C + GCYC PC
Sbjct: 32 YGPNVCGPCYACGPCGGCYCGYPC 55
>AM294191-1|CAL26095.1| 56|Drosophila melanogaster CG17956
protein.
Length = 56
Score = 28.3 bits (60), Expect = 6.5
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -3
Query: 388 FGPRICRRIHTQS*WWGCYCSVPC 317
+GP +C + GCYC PC
Sbjct: 32 YGPNVCGPCYACGPCGGCYCGYPC 55
>AM294190-1|CAL26094.1| 56|Drosophila melanogaster CG17956
protein.
Length = 56
Score = 28.3 bits (60), Expect = 6.5
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -3
Query: 388 FGPRICRRIHTQS*WWGCYCSVPC 317
+GP +C + GCYC PC
Sbjct: 32 YGPNVCGPCYACGPCGGCYCGYPC 55
>AM294189-1|CAL26093.1| 56|Drosophila melanogaster CG17956
protein.
Length = 56
Score = 28.3 bits (60), Expect = 6.5
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -3
Query: 388 FGPRICRRIHTQS*WWGCYCSVPC 317
+GP +C + GCYC PC
Sbjct: 32 YGPNVCGPCYACGPCGGCYCGYPC 55
>AM294188-1|CAL26092.1| 56|Drosophila melanogaster CG17956
protein.
Length = 56
Score = 28.3 bits (60), Expect = 6.5
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -3
Query: 388 FGPRICRRIHTQS*WWGCYCSVPC 317
+GP +C + GCYC PC
Sbjct: 32 YGPNVCGPCYACGPCGGCYCGYPC 55
>AM294187-1|CAL26091.1| 56|Drosophila melanogaster CG17956
protein.
Length = 56
Score = 28.3 bits (60), Expect = 6.5
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -3
Query: 388 FGPRICRRIHTQS*WWGCYCSVPC 317
+GP +C + GCYC PC
Sbjct: 32 YGPNVCGPCYACGPCGGCYCGYPC 55
>AE014298-1637|AAF48057.1| 1887|Drosophila melanogaster CG1554-PA
protein.
Length = 1887
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 248 PNIHIRSCMTLTSN*KTPTYTSTTRNATITSP 343
PN+ I S + + +PTYT T RN + TSP
Sbjct: 1827 PNMSIYSPSSTKYSPTSPTYTPTARNYSPTSP 1858
>AE014297-1766|AAF54994.1| 56|Drosophila melanogaster CG17956-PA
protein.
Length = 56
Score = 28.3 bits (60), Expect = 6.5
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -3
Query: 388 FGPRICRRIHTQS*WWGCYCSVPC 317
+GP +C + GCYC PC
Sbjct: 32 YGPNVCGPCYACGPCGGCYCGYPC 55
>BT022917-1|AAY55333.1| 158|Drosophila melanogaster IP04421p
protein.
Length = 158
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 370 DKYEDQIISIINDLKNTYGFNNIEASKQSLFDLXVRPGA-IKHL 498
++YEDQ + I+N N +G E+ Q + D R GA I HL
Sbjct: 52 EEYEDQGLRILNFPCNQFGGQMPESDGQEMLDHLRREGANIGHL 95
>BT022334-1|AAY54750.1| 193|Drosophila melanogaster IP04521p
protein.
Length = 193
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 370 DKYEDQIISIINDLKNTYGFNNIEASKQSLFDLXVRPGA-IKHL 498
++YEDQ + I+N N +G E+ Q + D R GA I HL
Sbjct: 87 EEYEDQGLRILNFPCNQFGGQMPESDGQEMLDHLRREGANIGHL 130
>BT001374-1|AAN71129.1| 697|Drosophila melanogaster GH01059p
protein.
Length = 697
Score = 27.9 bits (59), Expect = 8.6
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Frame = +1
Query: 13 YFRTYASSVLMQISRGTSEYSYEFKVPNKQADIILSVETTES-----NAKTYKDIVVPLV 177
+++TY + +LMQI ++ S+ +PN + E+ N D ++ +
Sbjct: 541 FYQTYFTDILMQIFSVVTDTSHTAGLPNHAIILAYMFSLVENRKITVNLGPIPDNMIFIQ 600
Query: 178 SHLIDSLKS--KHITD--VKVFLVG 240
++ LKS H++D VKVF+ G
Sbjct: 601 EYVASLLKSAFTHLSDNQVKVFVTG 625
>AY089558-1|AAL90296.1| 1063|Drosophila melanogaster LD45706p protein.
Length = 1063
Score = 27.9 bits (59), Expect = 8.6
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Frame = +1
Query: 13 YFRTYASSVLMQISRGTSEYSYEFKVPNKQADIILSVETTES-----NAKTYKDIVVPLV 177
+++TY + +LMQI ++ S+ +PN + E+ N D ++ +
Sbjct: 907 FYQTYFTDILMQIFSVVTDTSHTAGLPNHAIILAYMFSLVENRKITVNLGPIPDNMIFIQ 966
Query: 178 SHLIDSLKS--KHITD--VKVFLVG 240
++ LKS H++D VKVF+ G
Sbjct: 967 EYVASLLKSAFTHLSDNQVKVFVTG 991
>AJ249178-1|CAB53566.1| 1063|Drosophila melanogaster chromosomal
region maintenance1 protein protein.
Length = 1063
Score = 27.9 bits (59), Expect = 8.6
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Frame = +1
Query: 13 YFRTYASSVLMQISRGTSEYSYEFKVPNKQADIILSVETTES-----NAKTYKDIVVPLV 177
+++TY + +LMQI ++ S+ +PN + E+ N D ++ +
Sbjct: 907 FYQTYFTDILMQIFSVVTDTSHTAGLPNHAIILAYMFSLVENRKITVNLGPIPDNMIFIQ 966
Query: 178 SHLIDSLKS--KHITD--VKVFLVG 240
++ LKS H++D VKVF+ G
Sbjct: 967 EYVASLLKSAFTHLSDNQVKVFVTG 991
>AF190557-1|AAF01341.1| 1063|Drosophila melanogaster chromosomal
region maintenanceprotein CRM1 protein.
Length = 1063
Score = 27.9 bits (59), Expect = 8.6
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Frame = +1
Query: 13 YFRTYASSVLMQISRGTSEYSYEFKVPNKQADIILSVETTES-----NAKTYKDIVVPLV 177
+++TY + +LMQI ++ S+ +PN + E+ N D ++ +
Sbjct: 907 FYQTYFTDILMQIFSVVTDTSHTAGLPNHAIILAYMFSLVENRKITVNLGPIPDNMIFIQ 966
Query: 178 SHLIDSLKS--KHITD--VKVFLVG 240
++ LKS H++D VKVF+ G
Sbjct: 967 EYVASLLKSAFTHLSDNQVKVFVTG 991
>AF179361-2|AAD55780.1| 1063|Drosophila melanogaster embargoed
protein.
Length = 1063
Score = 27.9 bits (59), Expect = 8.6
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Frame = +1
Query: 13 YFRTYASSVLMQISRGTSEYSYEFKVPNKQADIILSVETTES-----NAKTYKDIVVPLV 177
+++TY + +LMQI ++ S+ +PN + E+ N D ++ +
Sbjct: 907 FYQTYFTDILMQIFSVVTDTSHTAGLPNHAIILAYMFSLVENRKITVNLGPIPDNMIFIQ 966
Query: 178 SHLIDSLKS--KHITD--VKVFLVG 240
++ LKS H++D VKVF+ G
Sbjct: 967 EYVASLLKSAFTHLSDNQVKVFVTG 991
>AF179360-1|AAD55778.1| 1063|Drosophila melanogaster embargoed
protein.
Length = 1063
Score = 27.9 bits (59), Expect = 8.6
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Frame = +1
Query: 13 YFRTYASSVLMQISRGTSEYSYEFKVPNKQADIILSVETTES-----NAKTYKDIVVPLV 177
+++TY + +LMQI ++ S+ +PN + E+ N D ++ +
Sbjct: 907 FYQTYFTDILMQIFSVVTDTSHTAGLPNHAIILAYMFSLVENRKITVNLGPIPDNMIFIQ 966
Query: 178 SHLIDSLKS--KHITD--VKVFLVG 240
++ LKS H++D VKVF+ G
Sbjct: 967 EYVASLLKSAFTHLSDNQVKVFVTG 991
>AE014134-1501|AAG22423.2| 1063|Drosophila melanogaster CG13387-PA
protein.
Length = 1063
Score = 27.9 bits (59), Expect = 8.6
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Frame = +1
Query: 13 YFRTYASSVLMQISRGTSEYSYEFKVPNKQADIILSVETTES-----NAKTYKDIVVPLV 177
+++TY + +LMQI ++ S+ +PN + E+ N D ++ +
Sbjct: 907 FYQTYFTDILMQIFSVVTDTSHTAGLPNHAIILAYMFSLVENRKITVNLGPIPDNMIFIQ 966
Query: 178 SHLIDSLKS--KHITD--VKVFLVG 240
++ LKS H++D VKVF+ G
Sbjct: 967 EYVASLLKSAFTHLSDNQVKVFVTG 991
>AE013599-2807|AAF57607.2| 193|Drosophila melanogaster CG15116-PA
protein.
Length = 193
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 370 DKYEDQIISIINDLKNTYGFNNIEASKQSLFDLXVRPGA-IKHL 498
++YEDQ + I+N N +G E+ Q + D R GA I HL
Sbjct: 87 EEYEDQGLRILNFPCNQFGGQMPESDGQEMLDHLRREGANIGHL 130
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.317 0.135 0.383
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,412,431
Number of Sequences: 53049
Number of extensions: 485099
Number of successful extensions: 1519
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1518
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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