Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32237
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75710-9|CAB00024.2|  752|Caenorhabditis elegans Hypothetical pr...    31   0.37 
U42848-2|AAA83608.2|  315|Caenorhabditis elegans Hypothetical pr...    30   0.85 
Z79752-2|CAB02079.1|  172|Caenorhabditis elegans Hypothetical pr...    29   2.0  
U53344-7|AAM15599.1|  183|Caenorhabditis elegans Hypothetical pr...    29   2.6  
U53344-6|AAK77632.2|  702|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z27080-3|CAA81604.3|  379|Caenorhabditis elegans Hypothetical pr...    28   3.4  
U67951-5|AAB07574.2|  778|Caenorhabditis elegans Degeneration of...    28   3.4  
L34414-1|AAA99524.1|  778|Caenorhabditis elegans degenerin protein.    28   3.4  
AC024817-3|AAK68524.1|  482|Caenorhabditis elegans Hypothetical ...    28   4.6  
Z70212-6|CAA94166.1|  336|Caenorhabditis elegans Hypothetical pr...    27   6.0  
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a...    27   6.0  
AF100669-9|AAK39269.1|  605|Caenorhabditis elegans Dipeptidyl pe...    27   8.0  
AF067623-2|AAC17554.1|  240|Caenorhabditis elegans Hypothetical ...    27   8.0  

>Z75710-9|CAB00024.2|  752|Caenorhabditis elegans Hypothetical
           protein D1081.3 protein.
          Length = 752

 Score = 31.5 bits (68), Expect = 0.37
 Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
 Frame = +1

Query: 154 KDIVVPLVSHLIDSLKSKHITDVKVFLVGH--TSKYPYPILYDTDLKLKNAHVH-FDDKE 324
           K+I VP + ++  ++     T+  VFL GH  ++K PY  L    LK+KN H   +   +
Sbjct: 488 KNISVPCIPYVSANV----YTNDDVFLYGHATSTKNPYSTLQFKPLKIKNLHDDGWICTD 543

Query: 325 RYNNIPTIKTGYESFDKYEDQIISIINDLKNTYGFNN 435
           +Y  +     G      Y+D++ +I   +K+T G+N+
Sbjct: 544 KYQAMQ--DRGGPLVKLYDDKVTAI--GIKSTTGYNS 576


>U42848-2|AAA83608.2|  315|Caenorhabditis elegans Hypothetical
           protein C31H1.5 protein.
          Length = 315

 Score = 30.3 bits (65), Expect = 0.85
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +2

Query: 242 IPPNIHIRSCMTLTSN*KTPTYTSTTRNATITSPP 346
           +P  +H +   T TS   T T  STT+N T+T  P
Sbjct: 241 LPFYLHYKEDTTTTSTTDTTTTISTTKNTTVTQKP 275


>Z79752-2|CAB02079.1|  172|Caenorhabditis elegans Hypothetical
           protein D2005.2 protein.
          Length = 172

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 14/56 (25%), Positives = 28/56 (50%)
 Frame = +1

Query: 220 VKVFLVGHTSKYPYPILYDTDLKLKNAHVHFDDKERYNNIPTIKTGYESFDKYEDQ 387
           ++  L+G T+ YPY I   +     +  +     +R++N      G + FD+Y+D+
Sbjct: 16  LQCLLIGFTAAYPYLIFPASPSSGDSRRLVKRAFDRFDNSGVFSFGAKRFDRYDDE 71


>U53344-7|AAM15599.1|  183|Caenorhabditis elegans Hypothetical
           protein T07H6.1b protein.
          Length = 183

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = +1

Query: 238 GHTSKYPYPILYDTDLKLKNAHVHFDDKERYNNIPTIKTGYESFDKYED 384
           G++S+Y   +  D  LKL    +HF D + +N    + T Y S D   D
Sbjct: 73  GNSSQY---VSLDVPLKLLEGEIHFPDAQFWNTEAELITRYVSKDSETD 118


>U53344-6|AAK77632.2|  702|Caenorhabditis elegans Hypothetical
           protein T07H6.1a protein.
          Length = 702

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = +1

Query: 238 GHTSKYPYPILYDTDLKLKNAHVHFDDKERYNNIPTIKTGYESFDKYED 384
           G++S+Y   +  D  LKL    +HF D + +N    + T Y S D   D
Sbjct: 592 GNSSQY---VSLDVPLKLLEGEIHFPDAQFWNTEAELITRYVSKDSETD 637


>Z27080-3|CAA81604.3|  379|Caenorhabditis elegans Hypothetical
           protein F55H2.7 protein.
          Length = 379

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 15/57 (26%), Positives = 24/57 (42%)
 Frame = +2

Query: 302 TYTSTTRNATITSPPSRLGMNPXXXXXXXXXXXXXXXKIHMDSTTSKPASNRCSIXL 472
           T ++TT N+TI   PS    N                ++  D T+S+P   RC + +
Sbjct: 131 TTSATTSNSTIRGKPSFGRENSAKIERTTPRLVPRMPRVSSDQTSSRPKEERCFLRI 187


>U67951-5|AAB07574.2|  778|Caenorhabditis elegans Degeneration of
           certain neuronsprotein 1 protein.
          Length = 778

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +2

Query: 251 NIHIRSCMTLTSN*KTPTYTSTTRNATITSPPS 349
           N+   S  T T+    PT TSTT   T T PP+
Sbjct: 342 NMTTTSTTTTTTTTPPPTTTSTTTTTTTTPPPT 374


>L34414-1|AAA99524.1|  778|Caenorhabditis elegans degenerin protein.
          Length = 778

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +2

Query: 251 NIHIRSCMTLTSN*KTPTYTSTTRNATITSPPS 349
           N+   S  T T+    PT TSTT   T T PP+
Sbjct: 342 NMTTTSTTTTTTTTPPPTTTSTTTTTTTTPPPT 374


>AC024817-3|AAK68524.1|  482|Caenorhabditis elegans Hypothetical
           protein Y54G2A.11a protein.
          Length = 482

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 23/98 (23%), Positives = 37/98 (37%)
 Frame = +1

Query: 10  PYFRTYASSVLMQISRGTSEYSYEFKVPNKQADIILSVETTESNAKTYKDIVVPLVSHLI 189
           P    + S +L Q         Y F+VP    D  L  + +E  +  +K+ V P +    
Sbjct: 191 PVADLFTSWMLAQSHPRPVPSDYLFEVPAFPEDFGLQRQNSEKRSDVWKEFVKPAMRKAP 250

Query: 190 DSLKSKHITDVKVFLVGHTSKYPYPILYDTDLKLKNAH 303
            S K KH+  ++  L    +  P       D+   N H
Sbjct: 251 LSDKKKHLHMLRDILRRPKASKPIRSFEILDIFTNNTH 288


>Z70212-6|CAA94166.1|  336|Caenorhabditis elegans Hypothetical
           protein R04D3.8 protein.
          Length = 336

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 7/100 (7%)
 Frame = -2

Query: 464 SNNDCLLASMLLNPYVFFKSLMILMIWSSYLSKDSYPVLMVGMLL*R----SLSSKCTWA 297
           +N D L    L NP  F  S+++  IW  ++   S  + +   ++      +++  C   
Sbjct: 3   TNEDYLSFLSLFNPVFFCTSVILQTIWLLFIIFHSAKMGIFRFIIAHTSVCNIACLCLVV 62

Query: 296 FFSLRSVSYKIGYGYLEVCPTR--NTLTSVMC-LLFRLSI 186
            F  R VS  +        P R  +TLT   C  +F+L+I
Sbjct: 63  LFQFRQVSSNVPVEVRSYGPLRILSTLTMYTCHQIFQLTI 102


>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 192 protein.
          Length = 2957

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 366 LRQIRGPNHQYHQRLEKYIWIQQHRSQQA 452
           L Q +  +++Y Q+L+   W QQ + QQA
Sbjct: 333 LAQFQSDHYRYSQQLQHVQWQQQQQQQQA 361


>AF100669-9|AAK39269.1|  605|Caenorhabditis elegans Dipeptidyl
           peptidase four (iv)family protein 7, isoform a protein.
          Length = 605

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 14/64 (21%), Positives = 26/64 (40%)
 Frame = +1

Query: 235 VGHTSKYPYPILYDTDLKLKNAHVHFDDKERYNNIPTIKTGYESFDKYEDQIISIINDLK 414
           V H S+   P+L   + K    +  F+     N +P      E  ++  D ++ +I   +
Sbjct: 527 VSHASEIVTPMLIVLENKSDTKYKDFESTIHNNGVPCFGEYEEEDEQVNDFVVKVIQFYR 586

Query: 415 NTYG 426
             YG
Sbjct: 587 TPYG 590


>AF067623-2|AAC17554.1|  240|Caenorhabditis elegans Hypothetical
           protein T26C12.2 protein.
          Length = 240

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +1

Query: 316 DKERYNNIPTIKTGYESFDKYEDQIISIIND 408
           +K++  + PT KT   + D YED+I++II +
Sbjct: 145 NKDKKTDKPTKKTISSAEDDYEDRILAIIEN 175


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.317    0.135    0.383 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,124,102
Number of Sequences: 27780
Number of extensions: 252723
Number of successful extensions: 760
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 756
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)