BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= epV32237 (516 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z75710-9|CAB00024.2| 752|Caenorhabditis elegans Hypothetical pr... 31 0.37 U42848-2|AAA83608.2| 315|Caenorhabditis elegans Hypothetical pr... 30 0.85 Z79752-2|CAB02079.1| 172|Caenorhabditis elegans Hypothetical pr... 29 2.0 U53344-7|AAM15599.1| 183|Caenorhabditis elegans Hypothetical pr... 29 2.6 U53344-6|AAK77632.2| 702|Caenorhabditis elegans Hypothetical pr... 29 2.6 Z27080-3|CAA81604.3| 379|Caenorhabditis elegans Hypothetical pr... 28 3.4 U67951-5|AAB07574.2| 778|Caenorhabditis elegans Degeneration of... 28 3.4 L34414-1|AAA99524.1| 778|Caenorhabditis elegans degenerin protein. 28 3.4 AC024817-3|AAK68524.1| 482|Caenorhabditis elegans Hypothetical ... 28 4.6 Z70212-6|CAA94166.1| 336|Caenorhabditis elegans Hypothetical pr... 27 6.0 AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 27 6.0 AF100669-9|AAK39269.1| 605|Caenorhabditis elegans Dipeptidyl pe... 27 8.0 AF067623-2|AAC17554.1| 240|Caenorhabditis elegans Hypothetical ... 27 8.0 >Z75710-9|CAB00024.2| 752|Caenorhabditis elegans Hypothetical protein D1081.3 protein. Length = 752 Score = 31.5 bits (68), Expect = 0.37 Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 3/97 (3%) Frame = +1 Query: 154 KDIVVPLVSHLIDSLKSKHITDVKVFLVGH--TSKYPYPILYDTDLKLKNAHVH-FDDKE 324 K+I VP + ++ ++ T+ VFL GH ++K PY L LK+KN H + + Sbjct: 488 KNISVPCIPYVSANV----YTNDDVFLYGHATSTKNPYSTLQFKPLKIKNLHDDGWICTD 543 Query: 325 RYNNIPTIKTGYESFDKYEDQIISIINDLKNTYGFNN 435 +Y + G Y+D++ +I +K+T G+N+ Sbjct: 544 KYQAMQ--DRGGPLVKLYDDKVTAI--GIKSTTGYNS 576 >U42848-2|AAA83608.2| 315|Caenorhabditis elegans Hypothetical protein C31H1.5 protein. Length = 315 Score = 30.3 bits (65), Expect = 0.85 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = +2 Query: 242 IPPNIHIRSCMTLTSN*KTPTYTSTTRNATITSPP 346 +P +H + T TS T T STT+N T+T P Sbjct: 241 LPFYLHYKEDTTTTSTTDTTTTISTTKNTTVTQKP 275 >Z79752-2|CAB02079.1| 172|Caenorhabditis elegans Hypothetical protein D2005.2 protein. Length = 172 Score = 29.1 bits (62), Expect = 2.0 Identities = 14/56 (25%), Positives = 28/56 (50%) Frame = +1 Query: 220 VKVFLVGHTSKYPYPILYDTDLKLKNAHVHFDDKERYNNIPTIKTGYESFDKYEDQ 387 ++ L+G T+ YPY I + + + +R++N G + FD+Y+D+ Sbjct: 16 LQCLLIGFTAAYPYLIFPASPSSGDSRRLVKRAFDRFDNSGVFSFGAKRFDRYDDE 71 >U53344-7|AAM15599.1| 183|Caenorhabditis elegans Hypothetical protein T07H6.1b protein. Length = 183 Score = 28.7 bits (61), Expect = 2.6 Identities = 16/49 (32%), Positives = 24/49 (48%) Frame = +1 Query: 238 GHTSKYPYPILYDTDLKLKNAHVHFDDKERYNNIPTIKTGYESFDKYED 384 G++S+Y + D LKL +HF D + +N + T Y S D D Sbjct: 73 GNSSQY---VSLDVPLKLLEGEIHFPDAQFWNTEAELITRYVSKDSETD 118 >U53344-6|AAK77632.2| 702|Caenorhabditis elegans Hypothetical protein T07H6.1a protein. Length = 702 Score = 28.7 bits (61), Expect = 2.6 Identities = 16/49 (32%), Positives = 24/49 (48%) Frame = +1 Query: 238 GHTSKYPYPILYDTDLKLKNAHVHFDDKERYNNIPTIKTGYESFDKYED 384 G++S+Y + D LKL +HF D + +N + T Y S D D Sbjct: 592 GNSSQY---VSLDVPLKLLEGEIHFPDAQFWNTEAELITRYVSKDSETD 637 >Z27080-3|CAA81604.3| 379|Caenorhabditis elegans Hypothetical protein F55H2.7 protein. Length = 379 Score = 28.3 bits (60), Expect = 3.4 Identities = 15/57 (26%), Positives = 24/57 (42%) Frame = +2 Query: 302 TYTSTTRNATITSPPSRLGMNPXXXXXXXXXXXXXXXKIHMDSTTSKPASNRCSIXL 472 T ++TT N+TI PS N ++ D T+S+P RC + + Sbjct: 131 TTSATTSNSTIRGKPSFGRENSAKIERTTPRLVPRMPRVSSDQTSSRPKEERCFLRI 187 >U67951-5|AAB07574.2| 778|Caenorhabditis elegans Degeneration of certain neuronsprotein 1 protein. Length = 778 Score = 28.3 bits (60), Expect = 3.4 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = +2 Query: 251 NIHIRSCMTLTSN*KTPTYTSTTRNATITSPPS 349 N+ S T T+ PT TSTT T T PP+ Sbjct: 342 NMTTTSTTTTTTTTPPPTTTSTTTTTTTTPPPT 374 >L34414-1|AAA99524.1| 778|Caenorhabditis elegans degenerin protein. Length = 778 Score = 28.3 bits (60), Expect = 3.4 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = +2 Query: 251 NIHIRSCMTLTSN*KTPTYTSTTRNATITSPPS 349 N+ S T T+ PT TSTT T T PP+ Sbjct: 342 NMTTTSTTTTTTTTPPPTTTSTTTTTTTTPPPT 374 >AC024817-3|AAK68524.1| 482|Caenorhabditis elegans Hypothetical protein Y54G2A.11a protein. Length = 482 Score = 27.9 bits (59), Expect = 4.6 Identities = 23/98 (23%), Positives = 37/98 (37%) Frame = +1 Query: 10 PYFRTYASSVLMQISRGTSEYSYEFKVPNKQADIILSVETTESNAKTYKDIVVPLVSHLI 189 P + S +L Q Y F+VP D L + +E + +K+ V P + Sbjct: 191 PVADLFTSWMLAQSHPRPVPSDYLFEVPAFPEDFGLQRQNSEKRSDVWKEFVKPAMRKAP 250 Query: 190 DSLKSKHITDVKVFLVGHTSKYPYPILYDTDLKLKNAH 303 S K KH+ ++ L + P D+ N H Sbjct: 251 LSDKKKHLHMLRDILRRPKASKPIRSFEILDIFTNNTH 288 >Z70212-6|CAA94166.1| 336|Caenorhabditis elegans Hypothetical protein R04D3.8 protein. Length = 336 Score = 27.5 bits (58), Expect = 6.0 Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 7/100 (7%) Frame = -2 Query: 464 SNNDCLLASMLLNPYVFFKSLMILMIWSSYLSKDSYPVLMVGMLL*R----SLSSKCTWA 297 +N D L L NP F S+++ IW ++ S + + ++ +++ C Sbjct: 3 TNEDYLSFLSLFNPVFFCTSVILQTIWLLFIIFHSAKMGIFRFIIAHTSVCNIACLCLVV 62 Query: 296 FFSLRSVSYKIGYGYLEVCPTR--NTLTSVMC-LLFRLSI 186 F R VS + P R +TLT C +F+L+I Sbjct: 63 LFQFRQVSSNVPVEVRSYGPLRILSTLTMYTCHQIFQLTI 102 >AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily assigned gene nameprotein 192 protein. Length = 2957 Score = 27.5 bits (58), Expect = 6.0 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = +3 Query: 366 LRQIRGPNHQYHQRLEKYIWIQQHRSQQA 452 L Q + +++Y Q+L+ W QQ + QQA Sbjct: 333 LAQFQSDHYRYSQQLQHVQWQQQQQQQQA 361 >AF100669-9|AAK39269.1| 605|Caenorhabditis elegans Dipeptidyl peptidase four (iv)family protein 7, isoform a protein. Length = 605 Score = 27.1 bits (57), Expect = 8.0 Identities = 14/64 (21%), Positives = 26/64 (40%) Frame = +1 Query: 235 VGHTSKYPYPILYDTDLKLKNAHVHFDDKERYNNIPTIKTGYESFDKYEDQIISIINDLK 414 V H S+ P+L + K + F+ N +P E ++ D ++ +I + Sbjct: 527 VSHASEIVTPMLIVLENKSDTKYKDFESTIHNNGVPCFGEYEEEDEQVNDFVVKVIQFYR 586 Query: 415 NTYG 426 YG Sbjct: 587 TPYG 590 >AF067623-2|AAC17554.1| 240|Caenorhabditis elegans Hypothetical protein T26C12.2 protein. Length = 240 Score = 27.1 bits (57), Expect = 8.0 Identities = 12/31 (38%), Positives = 21/31 (67%) Frame = +1 Query: 316 DKERYNNIPTIKTGYESFDKYEDQIISIIND 408 +K++ + PT KT + D YED+I++II + Sbjct: 145 NKDKKTDKPTKKTISSAEDDYEDRILAIIEN 175 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.317 0.135 0.383 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,124,102 Number of Sequences: 27780 Number of extensions: 252723 Number of successful extensions: 760 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 718 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 756 length of database: 12,740,198 effective HSP length: 77 effective length of database: 10,601,138 effective search space used: 996506972 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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