Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32236
         (348 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2YPA3 Cluster: Putative uncharacterized protein; n=3; ...    32   2.4  
UniRef50_P44476 Cluster: Rod shape-determining protein mreD; n=1...    32   3.1  
UniRef50_UPI0000D56148 Cluster: PREDICTED: similar to CG32076-PA...    31   4.1  
UniRef50_Q4UHV2 Cluster: Putative uncharacterized protein; n=2; ...    31   4.1  
UniRef50_A5C929 Cluster: Putative uncharacterized protein; n=1; ...    31   5.5  
UniRef50_UPI00006CAA4A Cluster: Protein kinase domain containing...    30   9.5  
UniRef50_Q6MTW2 Cluster: Hypothetical transmembrane protein; n=1...    30   9.5  

>UniRef50_A2YPA3 Cluster: Putative uncharacterized protein; n=3;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. indica (Rice)
          Length = 1691

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = +3

Query: 72  EVLCACRISNFASILNVA*ETIYLFICLLSXEFFYLFKEELVIMFS 209
           EV  ACR+ NF +   +A +  YL  CL+   F  L ++ L  + S
Sbjct: 673 EVARACRMGNFIAFFRLARKATYLQACLMHAHFAKLRRQALASLHS 718


>UniRef50_P44476 Cluster: Rod shape-determining protein mreD; n=17;
           Pasteurellaceae|Rep: Rod shape-determining protein mreD
           - Haemophilus influenzae
          Length = 162

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
 Frame = +1

Query: 7   LGLXSVLIY*GGWXVLPLIKSPKCYVHA-GYLILHQSSMWPEKLFIYLFVY*VXNFFIYL 183
           LGL   LI      V  L+ S   Y+ A  YLIL   S+W + L + LFV+ +    I+L
Sbjct: 62  LGLTWDLILGSTLGVHALVLSTSMYIIAKNYLILRNLSLWFQSLLVVLFVF-IIRLLIFL 120


>UniRef50_UPI0000D56148 Cluster: PREDICTED: similar to CG32076-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG32076-PA - Tribolium castaneum
          Length = 454

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -3

Query: 337 LIYFSLICIFIYYSLYTTNYTRVLKLIVRGEIV 239
           L YFSL C+F  +  + T  T  LK + R +I+
Sbjct: 273 LFYFSLFCLFFAWPHFVTEITGFLKFVKRHKII 305


>UniRef50_Q4UHV2 Cluster: Putative uncharacterized protein; n=2;
           Theileria|Rep: Putative uncharacterized protein -
           Theileria annulata
          Length = 838

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 17/49 (34%), Positives = 29/49 (59%)
 Frame = +3

Query: 153 LLSXEFFYLFKEELVIMFSYYI*MLPNFSTISPLTISFKTLV*FVVYKL 299
           LL  EFF   KE + I F  Y+ ++P+FS ++   I+   ++ + VY+L
Sbjct: 495 LLMGEFFKRSKENIAIFFGNYLLLMPHFS-LNYAYINENMVIEYNVYRL 542


>UniRef50_A5C929 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 177

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +3

Query: 147 ICLLSXEFFYLFKEELVIMFSYYI*MLPNFSTISPLTISFKT 272
           +C +   FFY +   L +  ++Y   L +F   SP T+SF+T
Sbjct: 55  LCEILDVFFYFYXFVLYLFLAFYRENLRSFPRKSPTTVSFRT 96


>UniRef50_UPI00006CAA4A Cluster: Protein kinase domain containing
           protein; n=1; Tetrahymena thermophila SB210|Rep: Protein
           kinase domain containing protein - Tetrahymena
           thermophila SB210
          Length = 675

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +3

Query: 93  ISNFASILNVA*ETIYLFICLLSXEFFYLFKEELVIMFSYY 215
           ISN + + ++A  +I+L  C+    FF LF+    +MF YY
Sbjct: 112 ISNASIVYHLAMNSIFLCDCIFVISFFALFR--FFLMFKYY 150


>UniRef50_Q6MTW2 Cluster: Hypothetical transmembrane protein; n=1;
           Mycoplasma mycoides subsp. mycoides SC|Rep: Hypothetical
           transmembrane protein - Mycoplasma mycoides subsp.
           mycoides SC
          Length = 339

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 21/87 (24%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
 Frame = +3

Query: 6   FRLXKC-FNILRWXXSFAIN*ITEVLCACRISNFASILNVA*ETIYLFICL-----LSXE 167
           F+   C F +L W   F+ + +  V+C+ ++ +F  + + +    + F CL     LS  
Sbjct: 9   FKFLICSFKLLIWDSKFSFSELKLVICSFKLVSFL-LSSFSFSINFSFYCLVELIKLSNS 67

Query: 168 FFYLFKEELVIMFSYYI*MLPNFSTIS 248
            F++ K  ++  FS  + ++ NF+ +S
Sbjct: 68  LFWIVKLAILFWFSELV-LISNFNLLS 93


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,407,374
Number of Sequences: 1657284
Number of extensions: 3296603
Number of successful extensions: 6387
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6359
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 11131607110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)