Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32236
         (348 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71259-7|CAA95793.1|  423|Caenorhabditis elegans Hypothetical pr...    29   1.2  
U59210-1|AAB09669.1|  423|Caenorhabditis elegans EAT-5 protein.        29   1.2  
Z81102-2|CAB03203.1|  313|Caenorhabditis elegans Hypothetical pr...    27   3.7  
Z81075-6|CAB03049.1|  564|Caenorhabditis elegans Hypothetical pr...    26   6.4  
Z81070-13|CAB03009.1|  564|Caenorhabditis elegans Hypothetical p...    26   6.4  
Z82288-6|CAB05325.1| 1112|Caenorhabditis elegans Hypothetical pr...    26   8.5  
AB201389-1|BAE78829.1| 1113|Caenorhabditis elegans recepotor typ...    26   8.5  

>Z71259-7|CAA95793.1|  423|Caenorhabditis elegans Hypothetical
           protein F13G3.8 protein.
          Length = 423

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
 Frame = +1

Query: 115 SMWPEKLFIYLFVY*VXNFFIYLKRNW*LC--LVIIFKCYQIFQQFLPLQ 258
           +M+ EK+F++L+++ +  FF+ L  +  LC  +    K  +  QQFL  Q
Sbjct: 271 NMFNEKIFLFLYIWFLLVFFVTLFDSIFLCYNMFSSHKLVEFLQQFLDNQ 320


>U59210-1|AAB09669.1|  423|Caenorhabditis elegans EAT-5 protein.
          Length = 423

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
 Frame = +1

Query: 115 SMWPEKLFIYLFVY*VXNFFIYLKRNW*LC--LVIIFKCYQIFQQFLPLQ 258
           +M+ EK+F++L+++ +  FF+ L  +  LC  +    K  +  QQFL  Q
Sbjct: 271 NMFNEKIFLFLYIWFLLVFFVTLFDSIFLCYNMFSSHKLVEFLQQFLDNQ 320


>Z81102-2|CAB03203.1|  313|Caenorhabditis elegans Hypothetical
           protein M02B1.4 protein.
          Length = 313

 Score = 27.1 bits (57), Expect = 3.7
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +3

Query: 138 YLFICLLSXEFFYLFKEELVIMFSYYI*ML 227
           Y+F+ LL     YLFK++ + ++ Y + M+
Sbjct: 128 YVFLPLLGANIAYLFKKDKLTLYEYRVSMI 157


>Z81075-6|CAB03049.1|  564|Caenorhabditis elegans Hypothetical
           protein F26E4.11 protein.
          Length = 564

 Score = 26.2 bits (55), Expect = 6.4
 Identities = 19/61 (31%), Positives = 29/61 (47%)
 Frame = +3

Query: 102 FASILNVA*ETIYLFICLLSXEFFYLFKEELVIMFSYYI*MLPNFSTISPLTISFKTLV* 281
           F  +L V   T  LF C+ S   F  F  + V  F+Y++ ++ NF       +SF  L+ 
Sbjct: 221 FDCLLAVFRSTYILFRCISSSRVFS-FNPDSVRHFNYWLELITNFVCELIQMLSFAQLLA 279

Query: 282 F 284
           F
Sbjct: 280 F 280


>Z81070-13|CAB03009.1|  564|Caenorhabditis elegans Hypothetical
           protein F26E4.11 protein.
          Length = 564

 Score = 26.2 bits (55), Expect = 6.4
 Identities = 19/61 (31%), Positives = 29/61 (47%)
 Frame = +3

Query: 102 FASILNVA*ETIYLFICLLSXEFFYLFKEELVIMFSYYI*MLPNFSTISPLTISFKTLV* 281
           F  +L V   T  LF C+ S   F  F  + V  F+Y++ ++ NF       +SF  L+ 
Sbjct: 221 FDCLLAVFRSTYILFRCISSSRVFS-FNPDSVRHFNYWLELITNFVCELIQMLSFAQLLA 279

Query: 282 F 284
           F
Sbjct: 280 F 280


>Z82288-6|CAB05325.1| 1112|Caenorhabditis elegans Hypothetical
           protein ZK896.8 protein.
          Length = 1112

 Score = 25.8 bits (54), Expect = 8.5
 Identities = 10/40 (25%), Positives = 23/40 (57%)
 Frame = +3

Query: 66  ITEVLCACRISNFASILNVA*ETIYLFICLLSXEFFYLFK 185
           + E +C  R    + +L ++  ++ + + L+S  FF+LF+
Sbjct: 481 LDEPICGYRGQRCSYLLEISVGSLIILLILISVVFFFLFR 520


>AB201389-1|BAE78829.1| 1113|Caenorhabditis elegans recepotor type
           guanyly cyclase protein.
          Length = 1113

 Score = 25.8 bits (54), Expect = 8.5
 Identities = 10/40 (25%), Positives = 23/40 (57%)
 Frame = +3

Query: 66  ITEVLCACRISNFASILNVA*ETIYLFICLLSXEFFYLFK 185
           + E +C  R    + +L ++  ++ + + L+S  FF+LF+
Sbjct: 482 LDEPICGYRGQRCSYLLEISVGSLIILLILISVVFFFLFR 521


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,380,286
Number of Sequences: 27780
Number of extensions: 87245
Number of successful extensions: 227
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 227
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 461821634
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)