Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32232
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   1.6  
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    22   2.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   4.9  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   4.9  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   6.5  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   8.6  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 11/45 (24%), Positives = 22/45 (48%)
 Frame = -1

Query: 285 LLLSAMHVKQSRCHLASSAMMALSTIGFPHPLQRVANLSA*QSEQ 151
           ++L+++H  +   HL          I FP P  +   ++A Q+E+
Sbjct: 144 IMLNSLHKYKPTVHLVRVGTEPRRVISFPFPETQFIAVTAYQNEE 188


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 40  PCDPSSWRVVARSPLRLR 93
           PCDP   R+ + +PL LR
Sbjct: 57  PCDPVGRRLKSLAPLVLR 74


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = -1

Query: 306 FLSTIRMLLLSAMHVKQSRCHLASSAMMALSTIGF 202
           FLS +  L  +A  ++ S+      A MAL+++ F
Sbjct: 256 FLSIVLALFRTAAELQASQIKWTRIAYMALASVPF 290


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = -1

Query: 306 FLSTIRMLLLSAMHVKQSRCHLASSAMMALSTIGF 202
           FLS +  L  +A  ++ S+      A MAL+++ F
Sbjct: 274 FLSIVLALFRTAAELQASQIKWTRIAYMALASVPF 308


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = -2

Query: 224 WLYRRLDFRTPCSEWRTC 171
           WLY      T C+ + TC
Sbjct: 101 WLYGIFGHETSCTRYWTC 118


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -2

Query: 188 SEWRTCLRSSRSNRDGQPVP*TLHRQAPS 102
           SE    L+SS S+R  QP   +  R AP+
Sbjct: 235 SELLAGLQSSGSSRSHQPATKSKPRPAPA 263


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,604
Number of Sequences: 336
Number of extensions: 2575
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)