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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32232
         (516 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0992 + 25083397-25083537,25084198-25084228,25084971-250851...    35   0.034
03_05_0383 + 23656041-23656096,23657189-23657255,23657599-236577...    33   0.18 
06_01_0579 + 4099039-4099086,4099798-4099848,4100151-4100286,410...    32   0.31 
09_04_0445 - 17677126-17677512,17677608-17678564                       29   1.7  
07_03_1482 - 26864793-26865043,26865325-26865454,26865564-268657...    29   2.2  
02_03_0360 + 18104948-18106159                                         29   2.2  
02_01_0178 - 1223725-1223736,1223900-1224025,1224404-1224649,122...    28   5.1  
09_04_0211 - 15656614-15657186                                         27   6.8  
05_05_0270 - 23728986-23729267,23729575-23730120,23730207-237305...    27   6.8  
03_02_0490 - 8840577-8840914,8841009-8841067,8841168-8841283,884...    27   6.8  
02_01_0420 + 3076493-3076646,3076721-3077704,3078013-3078824           27   6.8  
05_05_0114 - 22488172-22488279,22488414-22488511,22488616-224887...    27   8.9  
05_01_0361 - 2824728-2826043,2826288-2826507,2827616-2827702,282...    27   8.9  
01_01_0334 - 2698347-2699020,2699321-2699477,2699576-2699647,269...    27   8.9  

>12_02_0992 +
           25083397-25083537,25084198-25084228,25084971-25085139,
           25085228-25085291,25085408-25085474,25086543-25086586,
           25086835-25086922,25087079-25087238,25087659-25087779,
           25087859-25087942,25088043-25088162,25088689-25088901,
           25088995-25089054,25089144-25089262,25089407-25089465,
           25089585-25089919
          Length = 624

 Score = 35.1 bits (77), Expect = 0.034
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +2

Query: 164 YADKFATRCKGCGNPIVDKAIIA-LDAKWHRDCFTCMA 274
           +A   +  C GC NPI     ++ +D+ WH  CF C A
Sbjct: 249 FASSGSRTCAGCKNPIGHGRFLSCMDSVWHPQCFRCFA 286



 Score = 32.3 bits (70), Expect = 0.24
 Identities = 18/69 (26%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
 Frame = +2

Query: 2   ARGAMXCGDPITD-RVIQALGVSWHAHHFVXXXXXXXXXXXXFMEQAGRPYCSDCYADKF 178
           +R    C +PI   R +  +   WH   F             F     +PY   CY D F
Sbjct: 254 SRTCAGCKNPIGHGRFLSCMDSVWHPQCFRCFACNKPISEYEFAMHEDQPYHKSCYKDFF 313

Query: 179 ATRCKGCGN 205
             +C  C N
Sbjct: 314 HPKCDVCKN 322


>03_05_0383 +
           23656041-23656096,23657189-23657255,23657599-23657745,
           23658094-23658178,23658380-23658551,23660056-23660176,
           23660431-23660550,23660861-23661073,23661154-23661213,
           23661306-23661424,23661609-23661667,23661798-23662132
          Length = 517

 Score = 32.7 bits (71), Expect = 0.18
 Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
 Frame = +2

Query: 188 CKGCGNPIVDKAIIA-LDAKWHRDCFTCMA-DR--SNIRIVERKSAGIQ*PIRHSP*W 349
           C GC  PI     ++ +D+ WH  CF C A DR  S   I   K   I+   R  P W
Sbjct: 178 CAGCKTPIGQGRFLSCMDSVWHPQCFRCFACDRPISEYEIPTNKDGHIE--YRAHPFW 233


>06_01_0579 +
           4099039-4099086,4099798-4099848,4100151-4100286,
           4100287-4100401,4100496-4100528,4101037-4101166,
           4101663-4101751,4102042-4102148,4102238-4102309,
           4102384-4102764,4104907-4105064,4105581-4105674,
           4106082-4106089,4106297-4106387,4107136-4107289,
           4108257-4108377,4108468-4108551,4108946-4109065,
           4109181-4109393,4109482-4109544,4109668-4109783,
           4110132-4110190,4111126-4111445
          Length = 920

 Score = 31.9 bits (69), Expect = 0.31
 Identities = 13/53 (24%), Positives = 18/53 (33%)
 Frame = +2

Query: 41  RVIQALGVSWHAHHFVXXXXXXXXXXXXFMEQAGRPYCSDCYADKFATRCKGC 199
           R +  +G  WH   F             F      PY   CY ++F  +C  C
Sbjct: 569 RFLSCMGAVWHPECFRCHACNQPIYDYEFSMSGNHPYHKTCYKERFHPKCDVC 621



 Score = 27.9 bits (59), Expect = 5.1
 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = +2

Query: 164 YADKFATRCKGCGNPIVDKAIIA-LDAKWHRDCFTCMADRSNIRIVERKSAG 316
           ++  F T C GC + I     ++ + A WH +CF C A    I   E   +G
Sbjct: 551 FSSGFRT-CAGCHSEIGHGRFLSCMGAVWHPECFRCHACNQPIYDYEFSMSG 601


>09_04_0445 - 17677126-17677512,17677608-17678564
          Length = 447

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
 Frame = -1

Query: 366 AEWLVFHHGECRIG--HWIPALFLST 295
           A W +FHHGE R+G   W+ +L  +T
Sbjct: 180 ARWALFHHGEVRLGMSPWLTSLAEAT 205


>07_03_1482 -
           26864793-26865043,26865325-26865454,26865564-26865771,
           26867529-26867599,26867875-26867884,26869562-26870310
          Length = 472

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 9/67 (13%)
 Frame = -3

Query: 217 IDDWISAPLAASGELVCVAVG---AIGTASLFHEPSTAKLLLASTADEVVSVPR------ 65
           I  W S  +A   +  C  +    A+G  SL H P+   ++  +     + VPR      
Sbjct: 235 IKRWKSQRVADQSDFRCSKIAVTVAVGIRSLLHNPTRGNMITGNVLRATIEVPRAGEVNF 294

Query: 64  HAKSLDH 44
           H   LDH
Sbjct: 295 HCTHLDH 301


>02_03_0360 + 18104948-18106159
          Length = 403

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 19/52 (36%), Positives = 25/52 (48%)
 Frame = -3

Query: 205 ISAPLAASGELVCVAVGAIGTASLFHEPSTAKLLLASTADEVVSVPRHAKSL 50
           + + LAAS ELV    G  G       PSTA  LL++   E+     HA+ L
Sbjct: 8   VCSSLAASKELVKALAGIWGPGDGALNPSTASSLLSALRAELDLARAHARRL 59


>02_01_0178 -
           1223725-1223736,1223900-1224025,1224404-1224649,
           1224731-1224922,1225059-1225138,1225233-1226826
          Length = 749

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
 Frame = +3

Query: 102 RRSLAVEGSWNRLAVPIAPTATQTSSPLAARG-----AEIQSSIKPSSRLMLSGTAIASR 266
           RRSL +  +   L +P+ P   +  SPL A         + +S+  S RL+L G   +SR
Sbjct: 64  RRSLRLSSAHVALLLPLLPLHPRLVSPLLATSPHLLPPSLPASLPVSPRLLLLGALASSR 123

Query: 267 A 269
           +
Sbjct: 124 S 124


>09_04_0211 - 15656614-15657186
          Length = 190

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 206 DFRTPCSEWRTCLRSSRSNRDG 141
           + R   S W  CLRS RS+R+G
Sbjct: 67  ELRGHTSSWPRCLRSHRSSREG 88


>05_05_0270 -
           23728986-23729267,23729575-23730120,23730207-23730561,
           23731147-23731442,23731665-23731714,23731802-23731904,
           23732059-23732148,23732328-23732384,23732571-23732618,
           23732725-23732753,23732940-23733087
          Length = 667

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = -1

Query: 384 ELSAFTAEWLVFHHGECRIGHWIPALFLS 298
           E SAF   W++FH     I   I ALFLS
Sbjct: 93  EKSAFAISWILFHMALFCISTAIKALFLS 121


>03_02_0490 -
           8840577-8840914,8841009-8841067,8841168-8841283,
           8841578-8841640,8841826-8842038,8842211-8842330,
           8842453-8842578,8842593-8842749,8842830-8842962,
           8843054-8843138,8843305-8843421
          Length = 508

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +2

Query: 188 CKGCGNPIVDKAIIA-LDAKWHRDCFTCMADRSNIRIVE 301
           C GC + I     ++ L   WH  CF C + R  IR +E
Sbjct: 114 CGGCKHEIGHGHYLSCLGMYWHPQCFRCSSCRHPIREME 152


>02_01_0420 + 3076493-3076646,3076721-3077704,3078013-3078824
          Length = 649

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 13/50 (26%), Positives = 25/50 (50%)
 Frame = +3

Query: 273 RIEATFGSLREKVQESSDRFDILRDGKPATLR*MRLIHHKYINKIPHRDV 422
           R +   G     +++   R++I+RD        +  +HH+Y  K+ HRD+
Sbjct: 407 RTDQLHGGHHTTIRQWDTRYNIVRDIATG----LHYVHHEYEPKVLHRDI 452


>05_05_0114 -
           22488172-22488279,22488414-22488511,22488616-22488784,
           22489310-22489377,22490485-22490521,22490660-22490741,
           22490845-22490903
          Length = 206

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -1

Query: 453 LCHINSKSVTIHLDGGFYLYICDELSAFTAEWLVFHHGEC 334
           LC  N KS++   +   Y Y C  + +FTA  +VF  G+C
Sbjct: 66  LCSDNLKSLSTMANISQY-YCCLPVPSFTALLMVFFPGDC 104


>05_01_0361 -
           2824728-2826043,2826288-2826507,2827616-2827702,
           2827726-2827980,2828704-2828733
          Length = 635

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 17/65 (26%), Positives = 31/65 (47%)
 Frame = +3

Query: 12  PWXAATPSLTV*SKLLACRGTLTTSSAVDARRSLAVEGSWNRLAVPIAPTATQTSSPLAA 191
           PW AA+ ++     + + R  +  SSA  A+ ++ +  +  R   P A T T  +S  A 
Sbjct: 566 PWLAASVTIRTTIPVCSARPNVVNSSAGAAQPAVQILSASPRKEEPEARTNTSDTSNAAT 625

Query: 192 RGAEI 206
             +E+
Sbjct: 626 ASSEL 630


>01_01_0334 -
           2698347-2699020,2699321-2699477,2699576-2699647,
           2699697-2700641,2701183-2701259,2701908-2702064
          Length = 693

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = -3

Query: 232 RDDGFIDDWISAPLAASGELVCVAVGAIGTASLFHEPSTAKLLLASTADEVV 77
           R++   D+W S  +    E  C    A   A  F E S  +LLL+   +EV+
Sbjct: 543 RNEVLFDEWCSQNITVLQEEDCQHYEAAAAAFDFTEMSADQLLLSDLTNEVL 594


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,566,383
Number of Sequences: 37544
Number of extensions: 303217
Number of successful extensions: 1038
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1037
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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