BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= epV32232 (516 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 12_02_0992 + 25083397-25083537,25084198-25084228,25084971-250851... 35 0.034 03_05_0383 + 23656041-23656096,23657189-23657255,23657599-236577... 33 0.18 06_01_0579 + 4099039-4099086,4099798-4099848,4100151-4100286,410... 32 0.31 09_04_0445 - 17677126-17677512,17677608-17678564 29 1.7 07_03_1482 - 26864793-26865043,26865325-26865454,26865564-268657... 29 2.2 02_03_0360 + 18104948-18106159 29 2.2 02_01_0178 - 1223725-1223736,1223900-1224025,1224404-1224649,122... 28 5.1 09_04_0211 - 15656614-15657186 27 6.8 05_05_0270 - 23728986-23729267,23729575-23730120,23730207-237305... 27 6.8 03_02_0490 - 8840577-8840914,8841009-8841067,8841168-8841283,884... 27 6.8 02_01_0420 + 3076493-3076646,3076721-3077704,3078013-3078824 27 6.8 05_05_0114 - 22488172-22488279,22488414-22488511,22488616-224887... 27 8.9 05_01_0361 - 2824728-2826043,2826288-2826507,2827616-2827702,282... 27 8.9 01_01_0334 - 2698347-2699020,2699321-2699477,2699576-2699647,269... 27 8.9 >12_02_0992 + 25083397-25083537,25084198-25084228,25084971-25085139, 25085228-25085291,25085408-25085474,25086543-25086586, 25086835-25086922,25087079-25087238,25087659-25087779, 25087859-25087942,25088043-25088162,25088689-25088901, 25088995-25089054,25089144-25089262,25089407-25089465, 25089585-25089919 Length = 624 Score = 35.1 bits (77), Expect = 0.034 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%) Frame = +2 Query: 164 YADKFATRCKGCGNPIVDKAIIA-LDAKWHRDCFTCMA 274 +A + C GC NPI ++ +D+ WH CF C A Sbjct: 249 FASSGSRTCAGCKNPIGHGRFLSCMDSVWHPQCFRCFA 286 Score = 32.3 bits (70), Expect = 0.24 Identities = 18/69 (26%), Positives = 24/69 (34%), Gaps = 1/69 (1%) Frame = +2 Query: 2 ARGAMXCGDPITD-RVIQALGVSWHAHHFVXXXXXXXXXXXXFMEQAGRPYCSDCYADKF 178 +R C +PI R + + WH F F +PY CY D F Sbjct: 254 SRTCAGCKNPIGHGRFLSCMDSVWHPQCFRCFACNKPISEYEFAMHEDQPYHKSCYKDFF 313 Query: 179 ATRCKGCGN 205 +C C N Sbjct: 314 HPKCDVCKN 322 >03_05_0383 + 23656041-23656096,23657189-23657255,23657599-23657745, 23658094-23658178,23658380-23658551,23660056-23660176, 23660431-23660550,23660861-23661073,23661154-23661213, 23661306-23661424,23661609-23661667,23661798-23662132 Length = 517 Score = 32.7 bits (71), Expect = 0.18 Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 4/58 (6%) Frame = +2 Query: 188 CKGCGNPIVDKAIIA-LDAKWHRDCFTCMA-DR--SNIRIVERKSAGIQ*PIRHSP*W 349 C GC PI ++ +D+ WH CF C A DR S I K I+ R P W Sbjct: 178 CAGCKTPIGQGRFLSCMDSVWHPQCFRCFACDRPISEYEIPTNKDGHIE--YRAHPFW 233 >06_01_0579 + 4099039-4099086,4099798-4099848,4100151-4100286, 4100287-4100401,4100496-4100528,4101037-4101166, 4101663-4101751,4102042-4102148,4102238-4102309, 4102384-4102764,4104907-4105064,4105581-4105674, 4106082-4106089,4106297-4106387,4107136-4107289, 4108257-4108377,4108468-4108551,4108946-4109065, 4109181-4109393,4109482-4109544,4109668-4109783, 4110132-4110190,4111126-4111445 Length = 920 Score = 31.9 bits (69), Expect = 0.31 Identities = 13/53 (24%), Positives = 18/53 (33%) Frame = +2 Query: 41 RVIQALGVSWHAHHFVXXXXXXXXXXXXFMEQAGRPYCSDCYADKFATRCKGC 199 R + +G WH F F PY CY ++F +C C Sbjct: 569 RFLSCMGAVWHPECFRCHACNQPIYDYEFSMSGNHPYHKTCYKERFHPKCDVC 621 Score = 27.9 bits (59), Expect = 5.1 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Frame = +2 Query: 164 YADKFATRCKGCGNPIVDKAIIA-LDAKWHRDCFTCMADRSNIRIVERKSAG 316 ++ F T C GC + I ++ + A WH +CF C A I E +G Sbjct: 551 FSSGFRT-CAGCHSEIGHGRFLSCMGAVWHPECFRCHACNQPIYDYEFSMSG 601 >09_04_0445 - 17677126-17677512,17677608-17678564 Length = 447 Score = 29.5 bits (63), Expect = 1.7 Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 2/26 (7%) Frame = -1 Query: 366 AEWLVFHHGECRIG--HWIPALFLST 295 A W +FHHGE R+G W+ +L +T Sbjct: 180 ARWALFHHGEVRLGMSPWLTSLAEAT 205 >07_03_1482 - 26864793-26865043,26865325-26865454,26865564-26865771, 26867529-26867599,26867875-26867884,26869562-26870310 Length = 472 Score = 29.1 bits (62), Expect = 2.2 Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 9/67 (13%) Frame = -3 Query: 217 IDDWISAPLAASGELVCVAVG---AIGTASLFHEPSTAKLLLASTADEVVSVPR------ 65 I W S +A + C + A+G SL H P+ ++ + + VPR Sbjct: 235 IKRWKSQRVADQSDFRCSKIAVTVAVGIRSLLHNPTRGNMITGNVLRATIEVPRAGEVNF 294 Query: 64 HAKSLDH 44 H LDH Sbjct: 295 HCTHLDH 301 >02_03_0360 + 18104948-18106159 Length = 403 Score = 29.1 bits (62), Expect = 2.2 Identities = 19/52 (36%), Positives = 25/52 (48%) Frame = -3 Query: 205 ISAPLAASGELVCVAVGAIGTASLFHEPSTAKLLLASTADEVVSVPRHAKSL 50 + + LAAS ELV G G PSTA LL++ E+ HA+ L Sbjct: 8 VCSSLAASKELVKALAGIWGPGDGALNPSTASSLLSALRAELDLARAHARRL 59 >02_01_0178 - 1223725-1223736,1223900-1224025,1224404-1224649, 1224731-1224922,1225059-1225138,1225233-1226826 Length = 749 Score = 27.9 bits (59), Expect = 5.1 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 5/61 (8%) Frame = +3 Query: 102 RRSLAVEGSWNRLAVPIAPTATQTSSPLAARG-----AEIQSSIKPSSRLMLSGTAIASR 266 RRSL + + L +P+ P + SPL A + +S+ S RL+L G +SR Sbjct: 64 RRSLRLSSAHVALLLPLLPLHPRLVSPLLATSPHLLPPSLPASLPVSPRLLLLGALASSR 123 Query: 267 A 269 + Sbjct: 124 S 124 >09_04_0211 - 15656614-15657186 Length = 190 Score = 27.5 bits (58), Expect = 6.8 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -2 Query: 206 DFRTPCSEWRTCLRSSRSNRDG 141 + R S W CLRS RS+R+G Sbjct: 67 ELRGHTSSWPRCLRSHRSSREG 88 >05_05_0270 - 23728986-23729267,23729575-23730120,23730207-23730561, 23731147-23731442,23731665-23731714,23731802-23731904, 23732059-23732148,23732328-23732384,23732571-23732618, 23732725-23732753,23732940-23733087 Length = 667 Score = 27.5 bits (58), Expect = 6.8 Identities = 14/29 (48%), Positives = 16/29 (55%) Frame = -1 Query: 384 ELSAFTAEWLVFHHGECRIGHWIPALFLS 298 E SAF W++FH I I ALFLS Sbjct: 93 EKSAFAISWILFHMALFCISTAIKALFLS 121 >03_02_0490 - 8840577-8840914,8841009-8841067,8841168-8841283, 8841578-8841640,8841826-8842038,8842211-8842330, 8842453-8842578,8842593-8842749,8842830-8842962, 8843054-8843138,8843305-8843421 Length = 508 Score = 27.5 bits (58), Expect = 6.8 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%) Frame = +2 Query: 188 CKGCGNPIVDKAIIA-LDAKWHRDCFTCMADRSNIRIVE 301 C GC + I ++ L WH CF C + R IR +E Sbjct: 114 CGGCKHEIGHGHYLSCLGMYWHPQCFRCSSCRHPIREME 152 >02_01_0420 + 3076493-3076646,3076721-3077704,3078013-3078824 Length = 649 Score = 27.5 bits (58), Expect = 6.8 Identities = 13/50 (26%), Positives = 25/50 (50%) Frame = +3 Query: 273 RIEATFGSLREKVQESSDRFDILRDGKPATLR*MRLIHHKYINKIPHRDV 422 R + G +++ R++I+RD + +HH+Y K+ HRD+ Sbjct: 407 RTDQLHGGHHTTIRQWDTRYNIVRDIATG----LHYVHHEYEPKVLHRDI 452 >05_05_0114 - 22488172-22488279,22488414-22488511,22488616-22488784, 22489310-22489377,22490485-22490521,22490660-22490741, 22490845-22490903 Length = 206 Score = 27.1 bits (57), Expect = 8.9 Identities = 15/40 (37%), Positives = 22/40 (55%) Frame = -1 Query: 453 LCHINSKSVTIHLDGGFYLYICDELSAFTAEWLVFHHGEC 334 LC N KS++ + Y Y C + +FTA +VF G+C Sbjct: 66 LCSDNLKSLSTMANISQY-YCCLPVPSFTALLMVFFPGDC 104 >05_01_0361 - 2824728-2826043,2826288-2826507,2827616-2827702, 2827726-2827980,2828704-2828733 Length = 635 Score = 27.1 bits (57), Expect = 8.9 Identities = 17/65 (26%), Positives = 31/65 (47%) Frame = +3 Query: 12 PWXAATPSLTV*SKLLACRGTLTTSSAVDARRSLAVEGSWNRLAVPIAPTATQTSSPLAA 191 PW AA+ ++ + + R + SSA A+ ++ + + R P A T T +S A Sbjct: 566 PWLAASVTIRTTIPVCSARPNVVNSSAGAAQPAVQILSASPRKEEPEARTNTSDTSNAAT 625 Query: 192 RGAEI 206 +E+ Sbjct: 626 ASSEL 630 >01_01_0334 - 2698347-2699020,2699321-2699477,2699576-2699647, 2699697-2700641,2701183-2701259,2701908-2702064 Length = 693 Score = 27.1 bits (57), Expect = 8.9 Identities = 16/52 (30%), Positives = 24/52 (46%) Frame = -3 Query: 232 RDDGFIDDWISAPLAASGELVCVAVGAIGTASLFHEPSTAKLLLASTADEVV 77 R++ D+W S + E C A A F E S +LLL+ +EV+ Sbjct: 543 RNEVLFDEWCSQNITVLQEEDCQHYEAAAAAFDFTEMSADQLLLSDLTNEVL 594 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,566,383 Number of Sequences: 37544 Number of extensions: 303217 Number of successful extensions: 1038 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 1007 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1037 length of database: 14,793,348 effective HSP length: 77 effective length of database: 11,902,460 effective search space used: 1118831240 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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