BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= epV32232 (516 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 1.4 AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 1.4 DQ855483-1|ABH88170.1| 117|Apis mellifera chemosensory protein ... 22 3.3 AJ973398-1|CAJ01445.1| 117|Apis mellifera hypothetical protein ... 22 3.3 AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 22 4.3 DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 21 7.5 AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 21 10.0 >AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor protein. Length = 1370 Score = 23.4 bits (48), Expect = 1.4 Identities = 13/35 (37%), Positives = 20/35 (57%) Frame = +3 Query: 159 TATQTSSPLAARGAEIQSSIKPSSRLMLSGTAIAS 263 T + + L GA++ + + +RL LSG AIAS Sbjct: 387 TLELSDNKLRTVGAQLFNGLFVLNRLTLSGNAIAS 421 >AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. Length = 1946 Score = 23.4 bits (48), Expect = 1.4 Identities = 10/16 (62%), Positives = 11/16 (68%) Frame = -3 Query: 184 SGELVCVAVGAIGTAS 137 +GE VC A A GTAS Sbjct: 653 AGEYVCTAENAAGTAS 668 >DQ855483-1|ABH88170.1| 117|Apis mellifera chemosensory protein 2 protein. Length = 117 Score = 22.2 bits (45), Expect = 3.3 Identities = 9/18 (50%), Positives = 12/18 (66%) Frame = +1 Query: 40 PCDPSSWRVVARSPLRLR 93 PCDP R+ + +PL LR Sbjct: 60 PCDPVGRRLKSLAPLVLR 77 >AJ973398-1|CAJ01445.1| 117|Apis mellifera hypothetical protein protein. Length = 117 Score = 22.2 bits (45), Expect = 3.3 Identities = 9/18 (50%), Positives = 12/18 (66%) Frame = +1 Query: 40 PCDPSSWRVVARSPLRLR 93 PCDP R+ + +PL LR Sbjct: 60 PCDPVGRRLKSLAPLVLR 77 >AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. Length = 615 Score = 21.8 bits (44), Expect = 4.3 Identities = 6/10 (60%), Positives = 9/10 (90%) Frame = +1 Query: 91 RWMQEGAWRW 120 RW+Q+GA+ W Sbjct: 171 RWVQQGAFGW 180 >DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein protein. Length = 486 Score = 21.0 bits (42), Expect = 7.5 Identities = 6/15 (40%), Positives = 9/15 (60%) Frame = -1 Query: 63 TPRAWITRSVMGSPH 19 TP W+ R+V+ H Sbjct: 179 TPHGWMRRNVLNKQH 193 >AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera ORF for hypotheticalprotein. ). Length = 998 Score = 20.6 bits (41), Expect = 10.0 Identities = 10/25 (40%), Positives = 11/25 (44%) Frame = -3 Query: 310 TFSLNDPNVASIRHAREAIAVPLSI 236 T DP V S H E PLS+ Sbjct: 515 TLHFKDPKVESAFHNAEEAFSPLSL 539 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 135,102 Number of Sequences: 438 Number of extensions: 2454 Number of successful extensions: 7 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7 length of database: 146,343 effective HSP length: 54 effective length of database: 122,691 effective search space used: 14354847 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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