Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32228
         (516 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0110 + 850780-850805,851465-851537,851558-851720,851947-85...    28   3.9  
06_03_0522 - 21726317-21726634,21727202-21727654,21727771-217280...    28   3.9  
01_06_0846 + 32408333-32408484,32408560-32408926,32409021-324093...    28   5.1  
06_01_0375 + 2699179-2699264,2699697-2699786,2699913-2699991,270...    27   6.8  
04_04_0686 - 27249140-27249220,27249387-27249480,27249922-272499...    27   6.8  
09_02_0393 + 8510089-8510274,8510450-8510806,8510889-8511011,851...    27   8.9  
03_03_0166 - 15027065-15028465                                         27   8.9  

>11_01_0110 + 850780-850805,851465-851537,851558-851720,851947-852260,
            852330-852409,852506-852848,853068-853166,853240-853360,
            853567-853723,853976-854099,855275-855368,855866-857259,
            857882-857924,858240-858458,859379-859605,859701-859948,
            860246-860552,860725-861153
          Length = 1486

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -1

Query: 129  LSCGFRINEAILHLCYVNFLQHFHIHKHFRVYFIR 25
            L  GFR++ A+ +LC + +L+   I K  R   IR
Sbjct: 1002 LKAGFRLSSALFYLCNILWLRAVKIRKKLRRQGIR 1036


>06_03_0522 -
           21726317-21726634,21727202-21727654,21727771-21728025,
           21728109-21728249,21728404-21728565,21728660-21728820,
           21731598-21731733
          Length = 541

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -1

Query: 183 VRIIGFVNEVVVFLVNAILSCGFRINEAILHLC 85
           V I+G +N+  +FL   +LSC  R+ + I  +C
Sbjct: 350 VGILGIINQSFLFLAFFLLSCQERLYQEIREVC 382


>01_06_0846 +
           32408333-32408484,32408560-32408926,32409021-32409301,
           32409877-32409931,32410137-32410331,32410417-32410569
          Length = 400

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +2

Query: 290 HQKNTEPLKSVVERFTSTSTSNYWLVTTLSVLPMDLVRFPNSH 418
           H +NT P K  + +FT T TS+    T+    P+D V   + H
Sbjct: 158 HHRNTGPTKRWLLQFTYTGTSSQAAGTSSQGPPLDHVGTSSDH 200


>06_01_0375 +
           2699179-2699264,2699697-2699786,2699913-2699991,
           2700816-2700893,2701290-2701338,2702183-2702232,
           2702704-2702853,2703437-2703517,2703593-2703609,
           2705804-2705893,2706033-2706111,2706234-2706311,
           2707554-2707687,2707858-2707936,2708108-2708188,
           2708263-2708400
          Length = 452

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 14/56 (25%), Positives = 25/56 (44%)
 Frame = -1

Query: 243 HANIFSEVCXXLFFIIV*NGVRIIGFVNEVVVFLVNAILSCGFRINEAILHLCYVN 76
           H +  SE C  L  + V NG  +I  +N  +      I S G +++  +  + + N
Sbjct: 313 HVDNPSEFCGSLSALTVPNGAFVISTINRSIRAFATMIFSTGIQVSRIVNAILFHN 368


>04_04_0686 -
           27249140-27249220,27249387-27249480,27249922-27249987,
           27250068-27250158,27250378-27250460,27250565-27250633,
           27250971-27251038,27251118-27251204,27252998-27253069,
           27253469-27253527,27253663-27253780,27254411-27254466,
           27254892-27254937,27255011-27255052,27255837-27255922,
           27256039-27256087
          Length = 388

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 16/80 (20%), Positives = 34/80 (42%)
 Frame = +1

Query: 34  VYPKMFMNMEVLQKIYVTKMQDGLINPEAAAKYGIHKENDYFVYKANYSNAVLYNNEEQX 213
           V P+ F+   VL  I +  ++  L+  +   K+G H E  Y +  A   + + Y+     
Sbjct: 68  VVPRSFIVRIVLGSIILMTLR--LLRVQVKRKFGHHAEAFYLILTATQFHLLFYSTRPLP 125

Query: 214 XTYFTEDIGMNAYYYYFHSH 273
                  + +  Y+++  +H
Sbjct: 126 NVLALAFVNLTYYFWFKGNH 145


>09_02_0393 +
           8510089-8510274,8510450-8510806,8510889-8511011,
           8511209-8511523,8511576-8511682,8512559-8512629,
           8512952-8513029,8513390-8513454,8514224-8514274,
           8514373-8514414,8514785-8515105,8515154-8517880
          Length = 1480

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +1

Query: 199 NEEQXXTYFTEDIGMNAYYYYFHSHLPFWWTSEKYGALKERRGE 330
           N EQ  T   + I ++A+  + H     WWTS+KY   K +RG+
Sbjct: 118 NFEQYMTCKLDWINVDAWKCFCH-----WWTSDKYKE-KRKRGQ 155


>03_03_0166 - 15027065-15028465
          Length = 466

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +2

Query: 284 GGHQKNTEPLKSVVERFTSTSTSNYWLV 367
           G  +++ EPL+  + R+ +TS S+ W V
Sbjct: 360 GLEERDVEPLRMTLHRWGNTSASSVWYV 387


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,228,079
Number of Sequences: 37544
Number of extensions: 219732
Number of successful extensions: 444
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 442
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 444
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)