Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32224
         (516 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0331 - 29324967-29326256,29326919-29327020,29327226-293272...    31   0.55 
04_03_0387 - 15251816-15251905,15251999-15252069,15252098-152523...    29   1.7  
06_03_0668 + 23301578-23301791,23302102-23302199,23302233-233023...    29   2.2  
01_04_0107 + 16086724-16086799,16088007-16088288,16088523-160885...    27   6.8  

>05_07_0331 -
           29324967-29326256,29326919-29327020,29327226-29327278,
           29327628-29327674,29327762-29327841,29327933-29328016,
           29328383-29328433,29328925-29329050,29329231-29329347,
           29329710-29329851,29329986-29330053,29330509-29330608,
           29330713-29330840,29330929-29330997,29331083-29331205
          Length = 859

 Score = 31.1 bits (67), Expect = 0.55
 Identities = 12/19 (63%), Positives = 16/19 (84%)
 Frame = -3

Query: 265 FCAWIHVKALRVFVESVLR 209
           F +W+H  A+RVFVES+LR
Sbjct: 310 FSSWMHFCAVRVFVESILR 328


>04_03_0387 -
           15251816-15251905,15251999-15252069,15252098-15252323,
           15252344-15252496,15252570-15252656,15252745-15252948,
           15253038-15253159,15253354-15253507,15254329-15254434,
           15254507-15254617,15256468-15256622
          Length = 492

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 183 ECHITKKAHLKTDSTNTRRALTWIQAQKHSEKFT 284
           ECH TK     TD+T  +R LT++     + K+T
Sbjct: 328 ECHKTKDGRYVTDATPEKRGLTYLFLTVGATKYT 361


>06_03_0668 +
           23301578-23301791,23302102-23302199,23302233-23302301,
           23302674-23302961,23303045-23303208,23303344-23303599,
           23303706-23303816,23304109-23304195,23305916-23305985,
           23306093-23306149,23306309-23306426,23307314-23307403,
           23307492-23307671,23307816-23307893,23308016-23308088
          Length = 650

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 10/37 (27%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = +3

Query: 348 IRCCLLIIVRTEISFENRSEN--ILSHPISRTIIDIN 452
           ++CC+L+ V   ++ E   E+  +L HP  + ++D++
Sbjct: 103 VKCCVLVFVHMSVALEIIGEDNILLVHPEGKYVVDVD 139


>01_04_0107 +
           16086724-16086799,16088007-16088288,16088523-16088585,
           16088684-16089045
          Length = 260

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 411 ILSHPISRTIIDINHKYVLNISRNERRFSL 500
           I  HPI + ++D  H  VLNI   +  FS+
Sbjct: 139 IEGHPIEKLLLDAPHTGVLNIKLGKMAFSV 168


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,163,574
Number of Sequences: 37544
Number of extensions: 217041
Number of successful extensions: 388
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 388
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)