BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= epV32224 (516 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 05_07_0331 - 29324967-29326256,29326919-29327020,29327226-293272... 31 0.55 04_03_0387 - 15251816-15251905,15251999-15252069,15252098-152523... 29 1.7 06_03_0668 + 23301578-23301791,23302102-23302199,23302233-233023... 29 2.2 01_04_0107 + 16086724-16086799,16088007-16088288,16088523-160885... 27 6.8 >05_07_0331 - 29324967-29326256,29326919-29327020,29327226-29327278, 29327628-29327674,29327762-29327841,29327933-29328016, 29328383-29328433,29328925-29329050,29329231-29329347, 29329710-29329851,29329986-29330053,29330509-29330608, 29330713-29330840,29330929-29330997,29331083-29331205 Length = 859 Score = 31.1 bits (67), Expect = 0.55 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = -3 Query: 265 FCAWIHVKALRVFVESVLR 209 F +W+H A+RVFVES+LR Sbjct: 310 FSSWMHFCAVRVFVESILR 328 >04_03_0387 - 15251816-15251905,15251999-15252069,15252098-15252323, 15252344-15252496,15252570-15252656,15252745-15252948, 15253038-15253159,15253354-15253507,15254329-15254434, 15254507-15254617,15256468-15256622 Length = 492 Score = 29.5 bits (63), Expect = 1.7 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = +3 Query: 183 ECHITKKAHLKTDSTNTRRALTWIQAQKHSEKFT 284 ECH TK TD+T +R LT++ + K+T Sbjct: 328 ECHKTKDGRYVTDATPEKRGLTYLFLTVGATKYT 361 >06_03_0668 + 23301578-23301791,23302102-23302199,23302233-23302301, 23302674-23302961,23303045-23303208,23303344-23303599, 23303706-23303816,23304109-23304195,23305916-23305985, 23306093-23306149,23306309-23306426,23307314-23307403, 23307492-23307671,23307816-23307893,23308016-23308088 Length = 650 Score = 29.1 bits (62), Expect = 2.2 Identities = 10/37 (27%), Positives = 23/37 (62%), Gaps = 2/37 (5%) Frame = +3 Query: 348 IRCCLLIIVRTEISFENRSEN--ILSHPISRTIIDIN 452 ++CC+L+ V ++ E E+ +L HP + ++D++ Sbjct: 103 VKCCVLVFVHMSVALEIIGEDNILLVHPEGKYVVDVD 139 >01_04_0107 + 16086724-16086799,16088007-16088288,16088523-16088585, 16088684-16089045 Length = 260 Score = 27.5 bits (58), Expect = 6.8 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +3 Query: 411 ILSHPISRTIIDINHKYVLNISRNERRFSL 500 I HPI + ++D H VLNI + FS+ Sbjct: 139 IEGHPIEKLLLDAPHTGVLNIKLGKMAFSV 168 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,163,574 Number of Sequences: 37544 Number of extensions: 217041 Number of successful extensions: 388 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 384 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 388 length of database: 14,793,348 effective HSP length: 77 effective length of database: 11,902,460 effective search space used: 1118831240 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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