Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32221
         (383 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   0.79 
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   4.2  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    20   7.4  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.4 bits (48), Expect = 0.79
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -2

Query: 181 VPNARSASRDPMPSREQLRCP 119
           +PN+R  SR+   S  Q RCP
Sbjct: 79  LPNSRCNSRESSDSLVQPRCP 99



 Score = 21.8 bits (44), Expect = 2.4
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +1

Query: 277 PPPQESLEPIPSDNMSVNGYQDLVQGPL 360
           PP +E+  P P D  + +  + + + PL
Sbjct: 47  PPEEEAASPTPGDVPTPSSPRSISEDPL 74


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 57  TVSDLIKHYRIFLSF 101
           TVSD I+HY + ++F
Sbjct: 492 TVSDGIRHYYVNVTF 506


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +1

Query: 88  YFCRFSGNEVEGTAAAHGSASDLETL 165
           Y   F GN+VEG+     +  +++ L
Sbjct: 594 YLGDFEGNQVEGSPVTSLNREEIKRL 619


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,787
Number of Sequences: 336
Number of extensions: 1100
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8014124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)