Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32221
         (383 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical pr...    31   0.28 
Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical pr...    28   2.6  
Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical p...    28   2.6  
Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical pr...    28   2.6  
Z81529-2|CAB04298.2|  133|Caenorhabditis elegans Hypothetical pr...    26   7.9  

>Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical
           protein K02B12.5 protein.
          Length = 1204

 Score = 31.1 bits (67), Expect = 0.28
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = +1

Query: 64  VISLNTIGYFCRFSGNEVEGTAAAHGSA---SDLETLIERLERVTSRLERL 207
           ++S   I YFCRF  N+ +   A  G A   SDL+   + LE   + LE L
Sbjct: 340 LMSYQKIAYFCRFKRNDEDALRAYQGMALVYSDLDEHSKSLEMFKNLLELL 390


>Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical
           protein C34E11.3 protein.
          Length = 1577

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 14/38 (36%), Positives = 16/38 (42%)
 Frame = +1

Query: 91  FCRFSGNEVEGTAAAHGSASDLETLIERLERVTSRLER 204
           FCR  GN       A      L T IERLE+    L +
Sbjct: 381 FCRCDGNAHLQLELAESQVQHLNTKIERLEKTNDHLNK 418


>Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical
           protein C34E11.3 protein.
          Length = 1577

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 14/38 (36%), Positives = 16/38 (42%)
 Frame = +1

Query: 91  FCRFSGNEVEGTAAAHGSASDLETLIERLERVTSRLER 204
           FCR  GN       A      L T IERLE+    L +
Sbjct: 381 FCRCDGNAHLQLELAESQVQHLNTKIERLEKTNDHLNK 418


>Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical
           protein C34E11.3 protein.
          Length = 1577

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 14/38 (36%), Positives = 16/38 (42%)
 Frame = +1

Query: 91  FCRFSGNEVEGTAAAHGSASDLETLIERLERVTSRLER 204
           FCR  GN       A      L T IERLE+    L +
Sbjct: 381 FCRCDGNAHLQLELAESQVQHLNTKIERLEKTNDHLNK 418


>Z81529-2|CAB04298.2|  133|Caenorhabditis elegans Hypothetical
           protein F35E8.2 protein.
          Length = 133

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +2

Query: 14  CMKKDGLVCLKSVYNC 61
           C KK GL C  S YNC
Sbjct: 79  CPKKCGLCCQTSAYNC 94


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,322,127
Number of Sequences: 27780
Number of extensions: 112478
Number of successful extensions: 400
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 400
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 566277334
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)