BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= epV32216 (516 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 05_01_0545 - 4756266-4757510 31 0.55 02_01_0421 + 3080801-3081120,3081578-3081663,3081987-3082125,308... 29 2.9 03_02_0080 + 5498638-5498699,5499121-5499190,5499551-5500711,550... 27 6.8 12_01_0622 + 5124213-5125292,5126820-5128685 27 8.9 03_01_0555 + 4132630-4132923,4133514-4133771,4134125-4134249,413... 27 8.9 02_04_0244 - 21248449-21249038,21249240-21249438,21249963-212502... 27 8.9 >05_01_0545 - 4756266-4757510 Length = 414 Score = 31.1 bits (67), Expect = 0.55 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%) Frame = -2 Query: 419 CKPS**YLRWRRQCS*VYRTSPR*CASFQ-QLYVPAP 312 C P+ Y R RQC+ Y P CA+FQ + +VP+P Sbjct: 346 CLPNRPYQRTPRQCAAFYAAPPVDCAAFQCKPFVPSP 382 >02_01_0421 + 3080801-3081120,3081578-3081663,3081987-3082125, 3082470-3082554 Length = 209 Score = 28.7 bits (61), Expect = 2.9 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%) Frame = -2 Query: 125 HH--PPLLLCWFRVSARIRRWPYEMV*PTRATVADW 24 HH PP L RV+A +RRW + PTRA+ W Sbjct: 70 HHGCPPPAL---RVAAAVRRWTSTLTWPTRASPPRW 102 >03_02_0080 + 5498638-5498699,5499121-5499190,5499551-5500711, 5500940-5501029,5501147-5501464 Length = 566 Score = 27.5 bits (58), Expect = 6.8 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +3 Query: 321 NVKLLKGGASSRRGAVNLRTLTTPT 395 N K KGGAS+ + A + RT T PT Sbjct: 504 NGKAKKGGASTPKKAAHRRTTTVPT 528 >12_01_0622 + 5124213-5125292,5126820-5128685 Length = 981 Score = 27.1 bits (57), Expect = 8.9 Identities = 10/27 (37%), Positives = 18/27 (66%) Frame = +2 Query: 434 RIARLEDXKFDLEYIVKRKDMEISPPE 514 R+ RLE L+++V KD++ +PP+ Sbjct: 778 RLQRLEVRSESLDFLVNNKDIDATPPK 804 >03_01_0555 + 4132630-4132923,4133514-4133771,4134125-4134249, 4134789-4134990,4135172-4135297,4135404-4135660, 4135968-4136075,4136142-4136310,4136378-4136543, 4136967-4136998,4137256-4137579,4137683-4137757, 4138093-4138162,4138228-4138385,4138872-4139021 Length = 837 Score = 27.1 bits (57), Expect = 8.9 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +2 Query: 398 DTIKRVCKDYHERIARLEDXKFDLEYIV 481 +T ++C+ Y E A + KFDL YIV Sbjct: 643 ETGPKICQKYIECPALFQGRKFDLRYIV 670 >02_04_0244 - 21248449-21249038,21249240-21249438,21249963-21250212, 21250552-21250577 Length = 354 Score = 27.1 bits (57), Expect = 8.9 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = +3 Query: 3 RLAARLAPVSNCGSCW 50 R+ RL+P SNC CW Sbjct: 214 RVGVRLSPYSNCLDCW 229 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,916,103 Number of Sequences: 37544 Number of extensions: 158023 Number of successful extensions: 472 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 466 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 472 length of database: 14,793,348 effective HSP length: 77 effective length of database: 11,902,460 effective search space used: 1118831240 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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