BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= epV32216 (516 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF039041-9|AAB94188.2| 194|Caenorhabditis elegans Troponin i pr... 49 2e-06 AB107583-1|BAD89381.1| 194|Caenorhabditis elegans troponin I 4 ... 49 2e-06 U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated p... 43 1e-04 AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2 ... 43 1e-04 Z81593-2|CAB04737.1| 260|Caenorhabditis elegans Hypothetical pr... 40 8e-04 AB107359-1|BAD89380.1| 260|Caenorhabditis elegans troponin I 3 ... 40 8e-04 Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical pr... 32 0.21 AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1 ... 32 0.21 U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t prot... 32 0.28 U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t prot... 31 0.37 U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t pro... 29 2.0 U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t pro... 29 2.0 AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t pr... 29 2.0 AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t pr... 29 2.0 AL110478-10|CAE17956.3| 758|Caenorhabditis elegans Hypothetical... 28 3.4 AL117205-1|CAB55161.1| 181|Caenorhabditis elegans Hypothetical ... 28 4.6 AL117205-3|CAB55165.1| 204|Caenorhabditis elegans Hypothetical ... 27 6.0 U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T prot... 27 8.0 U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle position... 27 8.0 >AF039041-9|AAB94188.2| 194|Caenorhabditis elegans Troponin i protein 4 protein. Length = 194 Score = 49.2 bits (112), Expect = 2e-06 Identities = 32/111 (28%), Positives = 47/111 (42%) Frame = +2 Query: 173 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 352 +RK+ EVRKR+EEAS GF+TP Sbjct: 16 ERKKEEVRKRLEEASRMKKAKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQRIL 75 Query: 353 XXXCGKPKNIDDANEDTIKRVCKDYHERIARLEDXKFDLEYIVKRKDMEIS 505 ++D NED ++ V + ER+ LE +D+ YIV++KD EI+ Sbjct: 76 QERIIPLPDLD--NEDDLEAVYDEIRERLIDLESENYDVSYIVRQKDFEIN 124 >AB107583-1|BAD89381.1| 194|Caenorhabditis elegans troponin I 4 protein. Length = 194 Score = 49.2 bits (112), Expect = 2e-06 Identities = 32/111 (28%), Positives = 47/111 (42%) Frame = +2 Query: 173 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 352 +RK+ EVRKR+EEAS GF+TP Sbjct: 16 ERKKEEVRKRLEEASRMKKAKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQRIL 75 Query: 353 XXXCGKPKNIDDANEDTIKRVCKDYHERIARLEDXKFDLEYIVKRKDMEIS 505 ++D NED ++ V + ER+ LE +D+ YIV++KD EI+ Sbjct: 76 QERIIPLPDLD--NEDDLEAVYDEIRERLIDLESENYDVSYIVRQKDFEIN 124 >U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated protein 27 protein. Length = 242 Score = 43.2 bits (97), Expect = 1e-04 Identities = 26/112 (23%), Positives = 46/112 (41%), Gaps = 1/112 (0%) Frame = +2 Query: 173 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 352 + K+AEVRKR+EEA GF+TP Sbjct: 17 EAKKAEVRKRLEEAGNKKKAKKGFLTPERKKKLRKLLMVKAAEDLKRQQLLKEQERQKAL 76 Query: 353 XXXCGKPKNIDDANED-TIKRVCKDYHERIARLEDXKFDLEYIVKRKDMEIS 505 N+D ++ ++++ D R+ +LE+ K+D+ Y+V + + EI+ Sbjct: 77 ADRTISLPNVDSIDDKGQLEKIYNDLWARLTQLEEEKYDINYVVSQTEAEIN 128 >AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2 protein. Length = 242 Score = 43.2 bits (97), Expect = 1e-04 Identities = 26/112 (23%), Positives = 46/112 (41%), Gaps = 1/112 (0%) Frame = +2 Query: 173 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 352 + K+AEVRKR+EEA GF+TP Sbjct: 17 EAKKAEVRKRLEEAGNKKKAKKGFLTPERKKKLRKLLMVKAAEDLKRQQLLKEQERQKAL 76 Query: 353 XXXCGKPKNIDDANED-TIKRVCKDYHERIARLEDXKFDLEYIVKRKDMEIS 505 N+D ++ ++++ D R+ +LE+ K+D+ Y+V + + EI+ Sbjct: 77 ADRTISLPNVDSIDDKGQLEKIYNDLWARLTQLEEEKYDINYVVSQTEAEIN 128 >Z81593-2|CAB04737.1| 260|Caenorhabditis elegans Hypothetical protein T20B3.2 protein. Length = 260 Score = 40.3 bits (90), Expect = 8e-04 Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 1/110 (0%) Frame = +2 Query: 179 KRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 358 K+AEVRKRMEEA+ GF+TP Sbjct: 31 KKAEVRKRMEEAAKKGSKKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQKTLQQ 90 Query: 359 XCGKPKNIDDANED-TIKRVCKDYHERIARLEDXKFDLEYIVKRKDMEIS 505 ++D N+ + ++ +D R+ LE+ KFD+ + V + + EI+ Sbjct: 91 RTIPLPDVDSINDQGQLLKIYEDMFARVCALEEEKFDINFGVSQTEAEIN 140 >AB107359-1|BAD89380.1| 260|Caenorhabditis elegans troponin I 3 protein. Length = 260 Score = 40.3 bits (90), Expect = 8e-04 Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 1/110 (0%) Frame = +2 Query: 179 KRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 358 K+AEVRKRMEEA+ GF+TP Sbjct: 31 KKAEVRKRMEEAAKKGSKKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQKTLQQ 90 Query: 359 XCGKPKNIDDANED-TIKRVCKDYHERIARLEDXKFDLEYIVKRKDMEIS 505 ++D N+ + ++ +D R+ LE+ KFD+ + V + + EI+ Sbjct: 91 RTIPLPDVDSINDQGQLLKIYEDMFARVCALEEEKFDINFGVSQTEAEIN 140 >Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical protein F42E11.4 protein. Length = 250 Score = 32.3 bits (70), Expect = 0.21 Identities = 24/112 (21%), Positives = 41/112 (36%), Gaps = 1/112 (0%) Frame = +2 Query: 173 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 352 + K+AEVRKR+EEA GF+TP Sbjct: 30 EAKKAEVRKRLEEAG-QKKQKKGFLTPERKKKLRKLLMNKAAEDLKTQQLRKEQERVKVL 88 Query: 353 XXXCGKPKNIDDANEDT-IKRVCKDYHERIARLEDXKFDLEYIVKRKDMEIS 505 N+D ++ ++ + D R+ LE+ K+D+ +I + I+ Sbjct: 89 AERTVALPNVDSIDDHAKLEAIYNDLFSRLCNLEEEKYDINHITTETETTIN 140 >AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1 protein. Length = 250 Score = 32.3 bits (70), Expect = 0.21 Identities = 24/112 (21%), Positives = 41/112 (36%), Gaps = 1/112 (0%) Frame = +2 Query: 173 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 352 + K+AEVRKR+EEA GF+TP Sbjct: 30 EAKKAEVRKRLEEAG-QKKQKKGFLTPERKKKLRKLLMNKAAEDLKTQQLRKEQERVKVL 88 Query: 353 XXXCGKPKNIDDANEDT-IKRVCKDYHERIARLEDXKFDLEYIVKRKDMEIS 505 N+D ++ ++ + D R+ LE+ K+D+ +I + I+ Sbjct: 89 AERTVALPNVDSIDDHAKLEAIYNDLFSRLCNLEEEKYDINHITTETETTIN 140 >U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t protein 3, isoform b protein. Length = 1178 Score = 31.9 bits (69), Expect = 0.28 Identities = 13/42 (30%), Positives = 25/42 (59%) Frame = +2 Query: 377 NIDDANEDTIKRVCKDYHERIARLEDXKFDLEYIVKRKDMEI 502 N + + +K K+ H+RI +LE K+DLE +R++ ++ Sbjct: 1043 NASEVPQSELKAKIKELHQRICKLETEKYDLEKRHERQEYDM 1084 >U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t protein 3, isoform a protein. Length = 350 Score = 31.5 bits (68), Expect = 0.37 Identities = 13/41 (31%), Positives = 24/41 (58%) Frame = +2 Query: 377 NIDDANEDTIKRVCKDYHERIARLEDXKFDLEYIVKRKDME 499 N + + +K K+ H+RI +LE K+DLE +R++ + Sbjct: 209 NASEVPQSELKAKIKELHQRICKLETEKYDLEKRHERQEYD 249 >U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t protein 2, isoform b protein. Length = 324 Score = 29.1 bits (62), Expect = 2.0 Identities = 13/45 (28%), Positives = 25/45 (55%) Frame = +2 Query: 368 KPKNIDDANEDTIKRVCKDYHERIARLEDXKFDLEYIVKRKDMEI 502 K +++ + +K K H RI +LE K+DLE +R++ ++ Sbjct: 125 KAQDVSTLMPNDLKERIKGIHARIVKLEGEKYDLEKRRERQEYDL 169 >U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t protein 2, isoform a protein. Length = 428 Score = 29.1 bits (62), Expect = 2.0 Identities = 13/45 (28%), Positives = 25/45 (55%) Frame = +2 Query: 368 KPKNIDDANEDTIKRVCKDYHERIARLEDXKFDLEYIVKRKDMEI 502 K +++ + +K K H RI +LE K+DLE +R++ ++ Sbjct: 229 KAQDVSTLMPNDLKERIKGIHARIVKLEGEKYDLEKRRERQEYDL 273 >AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t protein 4, isoform b protein. Length = 308 Score = 29.1 bits (62), Expect = 2.0 Identities = 12/33 (36%), Positives = 22/33 (66%) Frame = +2 Query: 404 IKRVCKDYHERIARLEDXKFDLEYIVKRKDMEI 502 +K K+ H+RI +LE K+DLE +R++ ++ Sbjct: 216 MKAKIKELHQRICKLEAQKYDLEKRHERQEYDL 248 >AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t protein 4, isoform a protein. Length = 347 Score = 29.1 bits (62), Expect = 2.0 Identities = 12/33 (36%), Positives = 22/33 (66%) Frame = +2 Query: 404 IKRVCKDYHERIARLEDXKFDLEYIVKRKDMEI 502 +K K+ H+RI +LE K+DLE +R++ ++ Sbjct: 216 MKAKIKELHQRICKLEAQKYDLEKRHERQEYDL 248 >AL110478-10|CAE17956.3| 758|Caenorhabditis elegans Hypothetical protein Y26D4A.13 protein. Length = 758 Score = 28.3 bits (60), Expect = 3.4 Identities = 9/27 (33%), Positives = 18/27 (66%) Frame = +2 Query: 395 EDTIKRVCKDYHERIARLEDXKFDLEY 475 ED + R+C+ Y + + R+ + + +LEY Sbjct: 671 EDVVNRLCESYKKLLVRVAELETELEY 697 >AL117205-1|CAB55161.1| 181|Caenorhabditis elegans Hypothetical protein Y116A8A.1 protein. Length = 181 Score = 27.9 bits (59), Expect = 4.6 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%) Frame = -2 Query: 122 HPPLLLCWFRVSARIRRWPY--EMV*PTRATVADWREAGGK 6 +PP L W ++ ++R+PY + TR T A A GK Sbjct: 135 YPPCLYIWAKIGDTLKRYPYGNGYIDDTRCTTAMMSYACGK 175 >AL117205-3|CAB55165.1| 204|Caenorhabditis elegans Hypothetical protein Y116A8A.3 protein. Length = 204 Score = 27.5 bits (58), Expect = 6.0 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%) Frame = -2 Query: 122 HPPLLLCWFRVSARIRRWPY--EMV*PTRATVADWREAGGK 6 +PP L W ++ ++R+PY + TR T A A GK Sbjct: 158 YPPCLYIWAKIGDTLKRYPYGNGYIDDTRLTTAMMSYACGK 198 >U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T protein. Length = 405 Score = 27.1 bits (57), Expect = 8.0 Identities = 12/33 (36%), Positives = 20/33 (60%) Frame = +2 Query: 404 IKRVCKDYHERIARLEDXKFDLEYIVKRKDMEI 502 +K + H RI +LE K+DLE +R+D ++ Sbjct: 232 LKERIRGLHARIVKLEAEKYDLEKRRERQDYDM 264 >U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle positioning protein 2 protein. Length = 405 Score = 27.1 bits (57), Expect = 8.0 Identities = 12/33 (36%), Positives = 20/33 (60%) Frame = +2 Query: 404 IKRVCKDYHERIARLEDXKFDLEYIVKRKDMEI 502 +K + H RI +LE K+DLE +R+D ++ Sbjct: 232 LKERIRGLHARIVKLEAEKYDLEKRRERQDYDM 264 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 8,302,957 Number of Sequences: 27780 Number of extensions: 115320 Number of successful extensions: 367 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 355 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 367 length of database: 12,740,198 effective HSP length: 77 effective length of database: 10,601,138 effective search space used: 996506972 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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