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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32216
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039041-9|AAB94188.2|  194|Caenorhabditis elegans Troponin i pr...    49   2e-06
AB107583-1|BAD89381.1|  194|Caenorhabditis elegans troponin I 4 ...    49   2e-06
U40951-3|AAG01564.2|  242|Caenorhabditis elegans Uncoordinated p...    43   1e-04
AB107357-1|BAD89378.1|  242|Caenorhabditis elegans troponin I 2 ...    43   1e-04
Z81593-2|CAB04737.1|  260|Caenorhabditis elegans Hypothetical pr...    40   8e-04
AB107359-1|BAD89380.1|  260|Caenorhabditis elegans troponin I 3 ...    40   8e-04
Z66562-5|CAA91466.1|  250|Caenorhabditis elegans Hypothetical pr...    32   0.21 
AB107358-1|BAD89379.1|  250|Caenorhabditis elegans troponin I 1 ...    32   0.21 
U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t prot...    32   0.28 
U29082-2|AAT92082.1|  350|Caenorhabditis elegans Troponin t prot...    31   0.37 
U23523-11|AAP68942.2|  324|Caenorhabditis elegans Troponin t pro...    29   2.0  
U23523-10|AAP68941.1|  428|Caenorhabditis elegans Troponin t pro...    29   2.0  
AF039039-6|AAO25996.1|  308|Caenorhabditis elegans Troponin t pr...    29   2.0  
AF039039-5|AAB94176.2|  347|Caenorhabditis elegans Troponin t pr...    29   2.0  
AL110478-10|CAE17956.3|  758|Caenorhabditis elegans Hypothetical...    28   3.4  
AL117205-1|CAB55161.1|  181|Caenorhabditis elegans Hypothetical ...    28   4.6  
AL117205-3|CAB55165.1|  204|Caenorhabditis elegans Hypothetical ...    27   6.0  
U44759-1|AAA86906.1|  405|Caenorhabditis elegans troponin T prot...    27   8.0  
U43282-4|AAA83615.1|  405|Caenorhabditis elegans Muscle position...    27   8.0  

>AF039041-9|AAB94188.2|  194|Caenorhabditis elegans Troponin i
           protein 4 protein.
          Length = 194

 Score = 49.2 bits (112), Expect = 2e-06
 Identities = 32/111 (28%), Positives = 47/111 (42%)
 Frame = +2

Query: 173 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 352
           +RK+ EVRKR+EEAS       GF+TP                                 
Sbjct: 16  ERKKEEVRKRLEEASRMKKAKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQRIL 75

Query: 353 XXXCGKPKNIDDANEDTIKRVCKDYHERIARLEDXKFDLEYIVKRKDMEIS 505
                   ++D  NED ++ V  +  ER+  LE   +D+ YIV++KD EI+
Sbjct: 76  QERIIPLPDLD--NEDDLEAVYDEIRERLIDLESENYDVSYIVRQKDFEIN 124


>AB107583-1|BAD89381.1|  194|Caenorhabditis elegans troponin I 4
           protein.
          Length = 194

 Score = 49.2 bits (112), Expect = 2e-06
 Identities = 32/111 (28%), Positives = 47/111 (42%)
 Frame = +2

Query: 173 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 352
           +RK+ EVRKR+EEAS       GF+TP                                 
Sbjct: 16  ERKKEEVRKRLEEASRMKKAKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQRIL 75

Query: 353 XXXCGKPKNIDDANEDTIKRVCKDYHERIARLEDXKFDLEYIVKRKDMEIS 505
                   ++D  NED ++ V  +  ER+  LE   +D+ YIV++KD EI+
Sbjct: 76  QERIIPLPDLD--NEDDLEAVYDEIRERLIDLESENYDVSYIVRQKDFEIN 124


>U40951-3|AAG01564.2|  242|Caenorhabditis elegans Uncoordinated
           protein 27 protein.
          Length = 242

 Score = 43.2 bits (97), Expect = 1e-04
 Identities = 26/112 (23%), Positives = 46/112 (41%), Gaps = 1/112 (0%)
 Frame = +2

Query: 173 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 352
           + K+AEVRKR+EEA        GF+TP                                 
Sbjct: 17  EAKKAEVRKRLEEAGNKKKAKKGFLTPERKKKLRKLLMVKAAEDLKRQQLLKEQERQKAL 76

Query: 353 XXXCGKPKNIDDANED-TIKRVCKDYHERIARLEDXKFDLEYIVKRKDMEIS 505
                   N+D  ++   ++++  D   R+ +LE+ K+D+ Y+V + + EI+
Sbjct: 77  ADRTISLPNVDSIDDKGQLEKIYNDLWARLTQLEEEKYDINYVVSQTEAEIN 128


>AB107357-1|BAD89378.1|  242|Caenorhabditis elegans troponin I 2
           protein.
          Length = 242

 Score = 43.2 bits (97), Expect = 1e-04
 Identities = 26/112 (23%), Positives = 46/112 (41%), Gaps = 1/112 (0%)
 Frame = +2

Query: 173 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 352
           + K+AEVRKR+EEA        GF+TP                                 
Sbjct: 17  EAKKAEVRKRLEEAGNKKKAKKGFLTPERKKKLRKLLMVKAAEDLKRQQLLKEQERQKAL 76

Query: 353 XXXCGKPKNIDDANED-TIKRVCKDYHERIARLEDXKFDLEYIVKRKDMEIS 505
                   N+D  ++   ++++  D   R+ +LE+ K+D+ Y+V + + EI+
Sbjct: 77  ADRTISLPNVDSIDDKGQLEKIYNDLWARLTQLEEEKYDINYVVSQTEAEIN 128


>Z81593-2|CAB04737.1|  260|Caenorhabditis elegans Hypothetical
           protein T20B3.2 protein.
          Length = 260

 Score = 40.3 bits (90), Expect = 8e-04
 Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 1/110 (0%)
 Frame = +2

Query: 179 KRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 358
           K+AEVRKRMEEA+       GF+TP                                   
Sbjct: 31  KKAEVRKRMEEAAKKGSKKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQKTLQQ 90

Query: 359 XCGKPKNIDDANED-TIKRVCKDYHERIARLEDXKFDLEYIVKRKDMEIS 505
                 ++D  N+   + ++ +D   R+  LE+ KFD+ + V + + EI+
Sbjct: 91  RTIPLPDVDSINDQGQLLKIYEDMFARVCALEEEKFDINFGVSQTEAEIN 140


>AB107359-1|BAD89380.1|  260|Caenorhabditis elegans troponin I 3
           protein.
          Length = 260

 Score = 40.3 bits (90), Expect = 8e-04
 Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 1/110 (0%)
 Frame = +2

Query: 179 KRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 358
           K+AEVRKRMEEA+       GF+TP                                   
Sbjct: 31  KKAEVRKRMEEAAKKGSKKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQKTLQQ 90

Query: 359 XCGKPKNIDDANED-TIKRVCKDYHERIARLEDXKFDLEYIVKRKDMEIS 505
                 ++D  N+   + ++ +D   R+  LE+ KFD+ + V + + EI+
Sbjct: 91  RTIPLPDVDSINDQGQLLKIYEDMFARVCALEEEKFDINFGVSQTEAEIN 140


>Z66562-5|CAA91466.1|  250|Caenorhabditis elegans Hypothetical
           protein F42E11.4 protein.
          Length = 250

 Score = 32.3 bits (70), Expect = 0.21
 Identities = 24/112 (21%), Positives = 41/112 (36%), Gaps = 1/112 (0%)
 Frame = +2

Query: 173 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 352
           + K+AEVRKR+EEA        GF+TP                                 
Sbjct: 30  EAKKAEVRKRLEEAG-QKKQKKGFLTPERKKKLRKLLMNKAAEDLKTQQLRKEQERVKVL 88

Query: 353 XXXCGKPKNIDDANEDT-IKRVCKDYHERIARLEDXKFDLEYIVKRKDMEIS 505
                   N+D  ++   ++ +  D   R+  LE+ K+D+ +I    +  I+
Sbjct: 89  AERTVALPNVDSIDDHAKLEAIYNDLFSRLCNLEEEKYDINHITTETETTIN 140


>AB107358-1|BAD89379.1|  250|Caenorhabditis elegans troponin I 1
           protein.
          Length = 250

 Score = 32.3 bits (70), Expect = 0.21
 Identities = 24/112 (21%), Positives = 41/112 (36%), Gaps = 1/112 (0%)
 Frame = +2

Query: 173 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 352
           + K+AEVRKR+EEA        GF+TP                                 
Sbjct: 30  EAKKAEVRKRLEEAG-QKKQKKGFLTPERKKKLRKLLMNKAAEDLKTQQLRKEQERVKVL 88

Query: 353 XXXCGKPKNIDDANEDT-IKRVCKDYHERIARLEDXKFDLEYIVKRKDMEIS 505
                   N+D  ++   ++ +  D   R+  LE+ K+D+ +I    +  I+
Sbjct: 89  AERTVALPNVDSIDDHAKLEAIYNDLFSRLCNLEEEKYDINHITTETETTIN 140


>U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t protein
            3, isoform b protein.
          Length = 1178

 Score = 31.9 bits (69), Expect = 0.28
 Identities = 13/42 (30%), Positives = 25/42 (59%)
 Frame = +2

Query: 377  NIDDANEDTIKRVCKDYHERIARLEDXKFDLEYIVKRKDMEI 502
            N  +  +  +K   K+ H+RI +LE  K+DLE   +R++ ++
Sbjct: 1043 NASEVPQSELKAKIKELHQRICKLETEKYDLEKRHERQEYDM 1084


>U29082-2|AAT92082.1|  350|Caenorhabditis elegans Troponin t protein
           3, isoform a protein.
          Length = 350

 Score = 31.5 bits (68), Expect = 0.37
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = +2

Query: 377 NIDDANEDTIKRVCKDYHERIARLEDXKFDLEYIVKRKDME 499
           N  +  +  +K   K+ H+RI +LE  K+DLE   +R++ +
Sbjct: 209 NASEVPQSELKAKIKELHQRICKLETEKYDLEKRHERQEYD 249


>U23523-11|AAP68942.2|  324|Caenorhabditis elegans Troponin t
           protein 2, isoform b protein.
          Length = 324

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = +2

Query: 368 KPKNIDDANEDTIKRVCKDYHERIARLEDXKFDLEYIVKRKDMEI 502
           K +++     + +K   K  H RI +LE  K+DLE   +R++ ++
Sbjct: 125 KAQDVSTLMPNDLKERIKGIHARIVKLEGEKYDLEKRRERQEYDL 169


>U23523-10|AAP68941.1|  428|Caenorhabditis elegans Troponin t
           protein 2, isoform a protein.
          Length = 428

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = +2

Query: 368 KPKNIDDANEDTIKRVCKDYHERIARLEDXKFDLEYIVKRKDMEI 502
           K +++     + +K   K  H RI +LE  K+DLE   +R++ ++
Sbjct: 229 KAQDVSTLMPNDLKERIKGIHARIVKLEGEKYDLEKRRERQEYDL 273


>AF039039-6|AAO25996.1|  308|Caenorhabditis elegans Troponin t
           protein 4, isoform b protein.
          Length = 308

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = +2

Query: 404 IKRVCKDYHERIARLEDXKFDLEYIVKRKDMEI 502
           +K   K+ H+RI +LE  K+DLE   +R++ ++
Sbjct: 216 MKAKIKELHQRICKLEAQKYDLEKRHERQEYDL 248


>AF039039-5|AAB94176.2|  347|Caenorhabditis elegans Troponin t
           protein 4, isoform a protein.
          Length = 347

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = +2

Query: 404 IKRVCKDYHERIARLEDXKFDLEYIVKRKDMEI 502
           +K   K+ H+RI +LE  K+DLE   +R++ ++
Sbjct: 216 MKAKIKELHQRICKLEAQKYDLEKRHERQEYDL 248


>AL110478-10|CAE17956.3|  758|Caenorhabditis elegans Hypothetical
           protein Y26D4A.13 protein.
          Length = 758

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = +2

Query: 395 EDTIKRVCKDYHERIARLEDXKFDLEY 475
           ED + R+C+ Y + + R+ + + +LEY
Sbjct: 671 EDVVNRLCESYKKLLVRVAELETELEY 697


>AL117205-1|CAB55161.1|  181|Caenorhabditis elegans Hypothetical
           protein Y116A8A.1 protein.
          Length = 181

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = -2

Query: 122 HPPLLLCWFRVSARIRRWPY--EMV*PTRATVADWREAGGK 6
           +PP L  W ++   ++R+PY    +  TR T A    A GK
Sbjct: 135 YPPCLYIWAKIGDTLKRYPYGNGYIDDTRCTTAMMSYACGK 175


>AL117205-3|CAB55165.1|  204|Caenorhabditis elegans Hypothetical
           protein Y116A8A.3 protein.
          Length = 204

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = -2

Query: 122 HPPLLLCWFRVSARIRRWPY--EMV*PTRATVADWREAGGK 6
           +PP L  W ++   ++R+PY    +  TR T A    A GK
Sbjct: 158 YPPCLYIWAKIGDTLKRYPYGNGYIDDTRLTTAMMSYACGK 198


>U44759-1|AAA86906.1|  405|Caenorhabditis elegans troponin T
           protein.
          Length = 405

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +2

Query: 404 IKRVCKDYHERIARLEDXKFDLEYIVKRKDMEI 502
           +K   +  H RI +LE  K+DLE   +R+D ++
Sbjct: 232 LKERIRGLHARIVKLEAEKYDLEKRRERQDYDM 264


>U43282-4|AAA83615.1|  405|Caenorhabditis elegans Muscle positioning
           protein 2 protein.
          Length = 405

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +2

Query: 404 IKRVCKDYHERIARLEDXKFDLEYIVKRKDMEI 502
           +K   +  H RI +LE  K+DLE   +R+D ++
Sbjct: 232 LKERIRGLHARIVKLEAEKYDLEKRRERQDYDM 264


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,302,957
Number of Sequences: 27780
Number of extensions: 115320
Number of successful extensions: 367
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 367
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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