Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32216
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039041-9|AAB94188.2| 194|Caenorhabditis elegans Troponin i pr... 49 2e-06
AB107583-1|BAD89381.1| 194|Caenorhabditis elegans troponin I 4 ... 49 2e-06
U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated p... 43 1e-04
AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2 ... 43 1e-04
Z81593-2|CAB04737.1| 260|Caenorhabditis elegans Hypothetical pr... 40 8e-04
AB107359-1|BAD89380.1| 260|Caenorhabditis elegans troponin I 3 ... 40 8e-04
Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical pr... 32 0.21
AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1 ... 32 0.21
U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t prot... 32 0.28
U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t prot... 31 0.37
U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t pro... 29 2.0
U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t pro... 29 2.0
AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t pr... 29 2.0
AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t pr... 29 2.0
AL110478-10|CAE17956.3| 758|Caenorhabditis elegans Hypothetical... 28 3.4
AL117205-1|CAB55161.1| 181|Caenorhabditis elegans Hypothetical ... 28 4.6
AL117205-3|CAB55165.1| 204|Caenorhabditis elegans Hypothetical ... 27 6.0
U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T prot... 27 8.0
U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle position... 27 8.0
>AF039041-9|AAB94188.2| 194|Caenorhabditis elegans Troponin i
protein 4 protein.
Length = 194
Score = 49.2 bits (112), Expect = 2e-06
Identities = 32/111 (28%), Positives = 47/111 (42%)
Frame = +2
Query: 173 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 352
+RK+ EVRKR+EEAS GF+TP
Sbjct: 16 ERKKEEVRKRLEEASRMKKAKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQRIL 75
Query: 353 XXXCGKPKNIDDANEDTIKRVCKDYHERIARLEDXKFDLEYIVKRKDMEIS 505
++D NED ++ V + ER+ LE +D+ YIV++KD EI+
Sbjct: 76 QERIIPLPDLD--NEDDLEAVYDEIRERLIDLESENYDVSYIVRQKDFEIN 124
>AB107583-1|BAD89381.1| 194|Caenorhabditis elegans troponin I 4
protein.
Length = 194
Score = 49.2 bits (112), Expect = 2e-06
Identities = 32/111 (28%), Positives = 47/111 (42%)
Frame = +2
Query: 173 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 352
+RK+ EVRKR+EEAS GF+TP
Sbjct: 16 ERKKEEVRKRLEEASRMKKAKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQRIL 75
Query: 353 XXXCGKPKNIDDANEDTIKRVCKDYHERIARLEDXKFDLEYIVKRKDMEIS 505
++D NED ++ V + ER+ LE +D+ YIV++KD EI+
Sbjct: 76 QERIIPLPDLD--NEDDLEAVYDEIRERLIDLESENYDVSYIVRQKDFEIN 124
>U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated
protein 27 protein.
Length = 242
Score = 43.2 bits (97), Expect = 1e-04
Identities = 26/112 (23%), Positives = 46/112 (41%), Gaps = 1/112 (0%)
Frame = +2
Query: 173 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 352
+ K+AEVRKR+EEA GF+TP
Sbjct: 17 EAKKAEVRKRLEEAGNKKKAKKGFLTPERKKKLRKLLMVKAAEDLKRQQLLKEQERQKAL 76
Query: 353 XXXCGKPKNIDDANED-TIKRVCKDYHERIARLEDXKFDLEYIVKRKDMEIS 505
N+D ++ ++++ D R+ +LE+ K+D+ Y+V + + EI+
Sbjct: 77 ADRTISLPNVDSIDDKGQLEKIYNDLWARLTQLEEEKYDINYVVSQTEAEIN 128
>AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2
protein.
Length = 242
Score = 43.2 bits (97), Expect = 1e-04
Identities = 26/112 (23%), Positives = 46/112 (41%), Gaps = 1/112 (0%)
Frame = +2
Query: 173 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 352
+ K+AEVRKR+EEA GF+TP
Sbjct: 17 EAKKAEVRKRLEEAGNKKKAKKGFLTPERKKKLRKLLMVKAAEDLKRQQLLKEQERQKAL 76
Query: 353 XXXCGKPKNIDDANED-TIKRVCKDYHERIARLEDXKFDLEYIVKRKDMEIS 505
N+D ++ ++++ D R+ +LE+ K+D+ Y+V + + EI+
Sbjct: 77 ADRTISLPNVDSIDDKGQLEKIYNDLWARLTQLEEEKYDINYVVSQTEAEIN 128
>Z81593-2|CAB04737.1| 260|Caenorhabditis elegans Hypothetical
protein T20B3.2 protein.
Length = 260
Score = 40.3 bits (90), Expect = 8e-04
Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 1/110 (0%)
Frame = +2
Query: 179 KRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 358
K+AEVRKRMEEA+ GF+TP
Sbjct: 31 KKAEVRKRMEEAAKKGSKKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQKTLQQ 90
Query: 359 XCGKPKNIDDANED-TIKRVCKDYHERIARLEDXKFDLEYIVKRKDMEIS 505
++D N+ + ++ +D R+ LE+ KFD+ + V + + EI+
Sbjct: 91 RTIPLPDVDSINDQGQLLKIYEDMFARVCALEEEKFDINFGVSQTEAEIN 140
>AB107359-1|BAD89380.1| 260|Caenorhabditis elegans troponin I 3
protein.
Length = 260
Score = 40.3 bits (90), Expect = 8e-04
Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 1/110 (0%)
Frame = +2
Query: 179 KRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 358
K+AEVRKRMEEA+ GF+TP
Sbjct: 31 KKAEVRKRMEEAAKKGSKKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQKTLQQ 90
Query: 359 XCGKPKNIDDANED-TIKRVCKDYHERIARLEDXKFDLEYIVKRKDMEIS 505
++D N+ + ++ +D R+ LE+ KFD+ + V + + EI+
Sbjct: 91 RTIPLPDVDSINDQGQLLKIYEDMFARVCALEEEKFDINFGVSQTEAEIN 140
>Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical
protein F42E11.4 protein.
Length = 250
Score = 32.3 bits (70), Expect = 0.21
Identities = 24/112 (21%), Positives = 41/112 (36%), Gaps = 1/112 (0%)
Frame = +2
Query: 173 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 352
+ K+AEVRKR+EEA GF+TP
Sbjct: 30 EAKKAEVRKRLEEAG-QKKQKKGFLTPERKKKLRKLLMNKAAEDLKTQQLRKEQERVKVL 88
Query: 353 XXXCGKPKNIDDANEDT-IKRVCKDYHERIARLEDXKFDLEYIVKRKDMEIS 505
N+D ++ ++ + D R+ LE+ K+D+ +I + I+
Sbjct: 89 AERTVALPNVDSIDDHAKLEAIYNDLFSRLCNLEEEKYDINHITTETETTIN 140
>AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1
protein.
Length = 250
Score = 32.3 bits (70), Expect = 0.21
Identities = 24/112 (21%), Positives = 41/112 (36%), Gaps = 1/112 (0%)
Frame = +2
Query: 173 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 352
+ K+AEVRKR+EEA GF+TP
Sbjct: 30 EAKKAEVRKRLEEAG-QKKQKKGFLTPERKKKLRKLLMNKAAEDLKTQQLRKEQERVKVL 88
Query: 353 XXXCGKPKNIDDANEDT-IKRVCKDYHERIARLEDXKFDLEYIVKRKDMEIS 505
N+D ++ ++ + D R+ LE+ K+D+ +I + I+
Sbjct: 89 AERTVALPNVDSIDDHAKLEAIYNDLFSRLCNLEEEKYDINHITTETETTIN 140
>U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t protein
3, isoform b protein.
Length = 1178
Score = 31.9 bits (69), Expect = 0.28
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +2
Query: 377 NIDDANEDTIKRVCKDYHERIARLEDXKFDLEYIVKRKDMEI 502
N + + +K K+ H+RI +LE K+DLE +R++ ++
Sbjct: 1043 NASEVPQSELKAKIKELHQRICKLETEKYDLEKRHERQEYDM 1084
>U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t protein
3, isoform a protein.
Length = 350
Score = 31.5 bits (68), Expect = 0.37
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +2
Query: 377 NIDDANEDTIKRVCKDYHERIARLEDXKFDLEYIVKRKDME 499
N + + +K K+ H+RI +LE K+DLE +R++ +
Sbjct: 209 NASEVPQSELKAKIKELHQRICKLETEKYDLEKRHERQEYD 249
>U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t
protein 2, isoform b protein.
Length = 324
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +2
Query: 368 KPKNIDDANEDTIKRVCKDYHERIARLEDXKFDLEYIVKRKDMEI 502
K +++ + +K K H RI +LE K+DLE +R++ ++
Sbjct: 125 KAQDVSTLMPNDLKERIKGIHARIVKLEGEKYDLEKRRERQEYDL 169
>U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t
protein 2, isoform a protein.
Length = 428
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +2
Query: 368 KPKNIDDANEDTIKRVCKDYHERIARLEDXKFDLEYIVKRKDMEI 502
K +++ + +K K H RI +LE K+DLE +R++ ++
Sbjct: 229 KAQDVSTLMPNDLKERIKGIHARIVKLEGEKYDLEKRRERQEYDL 273
>AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t
protein 4, isoform b protein.
Length = 308
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2
Query: 404 IKRVCKDYHERIARLEDXKFDLEYIVKRKDMEI 502
+K K+ H+RI +LE K+DLE +R++ ++
Sbjct: 216 MKAKIKELHQRICKLEAQKYDLEKRHERQEYDL 248
>AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t
protein 4, isoform a protein.
Length = 347
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2
Query: 404 IKRVCKDYHERIARLEDXKFDLEYIVKRKDMEI 502
+K K+ H+RI +LE K+DLE +R++ ++
Sbjct: 216 MKAKIKELHQRICKLEAQKYDLEKRHERQEYDL 248
>AL110478-10|CAE17956.3| 758|Caenorhabditis elegans Hypothetical
protein Y26D4A.13 protein.
Length = 758
Score = 28.3 bits (60), Expect = 3.4
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +2
Query: 395 EDTIKRVCKDYHERIARLEDXKFDLEY 475
ED + R+C+ Y + + R+ + + +LEY
Sbjct: 671 EDVVNRLCESYKKLLVRVAELETELEY 697
>AL117205-1|CAB55161.1| 181|Caenorhabditis elegans Hypothetical
protein Y116A8A.1 protein.
Length = 181
Score = 27.9 bits (59), Expect = 4.6
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -2
Query: 122 HPPLLLCWFRVSARIRRWPY--EMV*PTRATVADWREAGGK 6
+PP L W ++ ++R+PY + TR T A A GK
Sbjct: 135 YPPCLYIWAKIGDTLKRYPYGNGYIDDTRCTTAMMSYACGK 175
>AL117205-3|CAB55165.1| 204|Caenorhabditis elegans Hypothetical
protein Y116A8A.3 protein.
Length = 204
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -2
Query: 122 HPPLLLCWFRVSARIRRWPY--EMV*PTRATVADWREAGGK 6
+PP L W ++ ++R+PY + TR T A A GK
Sbjct: 158 YPPCLYIWAKIGDTLKRYPYGNGYIDDTRLTTAMMSYACGK 198
>U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T
protein.
Length = 405
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 404 IKRVCKDYHERIARLEDXKFDLEYIVKRKDMEI 502
+K + H RI +LE K+DLE +R+D ++
Sbjct: 232 LKERIRGLHARIVKLEAEKYDLEKRRERQDYDM 264
>U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle positioning
protein 2 protein.
Length = 405
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 404 IKRVCKDYHERIARLEDXKFDLEYIVKRKDMEI 502
+K + H RI +LE K+DLE +R+D ++
Sbjct: 232 LKERIRGLHARIVKLEAEKYDLEKRRERQDYDM 264
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,302,957
Number of Sequences: 27780
Number of extensions: 115320
Number of successful extensions: 367
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 367
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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