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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32215
         (516 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac...   168   4e-43
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon...   168   4e-43
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce...   119   3e-28
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma...    92   5e-20
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz...    44   2e-05
SPCC550.05 |nse1||Smc5-6 complex non-SMC subunit 1|Schizosacchar...    25   5.1  
SPBC3H7.09 |mug142||palmitoyltransferase|Schizosaccharomyces pom...    25   6.7  
SPAC3C7.09 |set8||lysine methyltransferase Set8 |Schizosaccharom...    25   6.7  
SPAC16C9.04c |||CCR4-Not complex subunit Mot2 |Schizosaccharomyc...    25   6.7  
SPCC1919.14c |bdp1||transcription factor TFIIIB complex subunit ...    25   8.9  
SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit ...    25   8.9  
SPCC777.11 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||...    25   8.9  

>SPCP31B10.07 |eft202||translation elongation factor 2
            |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 842

 Score =  168 bits (409), Expect = 4e-43
 Identities = 76/121 (62%), Positives = 90/121 (74%)
 Frame = +2

Query: 2    LYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYL 181
            +YA  L A P + EPV+L EIQ  E A+GGIY VLN++RGHVF E Q  GTP++ +KAYL
Sbjct: 713  VYASTLLASPIIQEPVFLVEIQVSENAMGGIYSVLNKKRGHVFSEEQRVGTPLYNIKAYL 772

Query: 182  PVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKGLKEGL 361
            PVNESFGFT +LR  T GQAFPQ VFDHW  + GDP +P SKP  +V E RKRKGLKE +
Sbjct: 773  PVNESFGFTGELRQATAGQAFPQLVFDHWSPMSGDPLDPTSKPGQIVCEARKRKGLKENV 832

Query: 362  P 364
            P
Sbjct: 833  P 833


>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
            elongation factor 2 |Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 842

 Score =  168 bits (409), Expect = 4e-43
 Identities = 76/121 (62%), Positives = 90/121 (74%)
 Frame = +2

Query: 2    LYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYL 181
            +YA  L A P + EPV+L EIQ  E A+GGIY VLN++RGHVF E Q  GTP++ +KAYL
Sbjct: 713  VYASTLLASPIIQEPVFLVEIQVSENAMGGIYSVLNKKRGHVFSEEQRVGTPLYNIKAYL 772

Query: 182  PVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKGLKEGL 361
            PVNESFGFT +LR  T GQAFPQ VFDHW  + GDP +P SKP  +V E RKRKGLKE +
Sbjct: 773  PVNESFGFTGELRQATAGQAFPQLVFDHWSPMSGDPLDPTSKPGQIVCEARKRKGLKENV 832

Query: 362  P 364
            P
Sbjct: 833  P 833


>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
            pombe|chr 2|||Manual
          Length = 983

 Score =  119 bits (286), Expect = 3e-28
 Identities = 53/102 (51%), Positives = 71/102 (69%)
 Frame = +2

Query: 5    YACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLP 184
            Y+  LTA PRLMEPVY+ E+  P  ++  IY +L RRRGHV ++    G+P+++V+A +P
Sbjct: 830  YSSFLTASPRLMEPVYMVEVHAPADSLPIIYDLLTRRRGHVLQDIPRPGSPLYLVRALIP 889

Query: 185  VNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKP 310
            V +S GF  DLR +T GQA  Q VFDHWQV+PGDP +   KP
Sbjct: 890  VIDSCGFETDLRVHTQGQAMCQMVFDHWQVVPGDPLDKSIKP 931


>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1000

 Score = 91.9 bits (218), Expect = 5e-20
 Identities = 39/87 (44%), Positives = 57/87 (65%)
 Frame = +2

Query: 29   PRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFT 208
            PRLM  +Y C++Q     +G +YGV+++RRG V +E    GTP FIVKA +PV ESFGF 
Sbjct: 860  PRLMLAMYSCDVQATSEVLGRVYGVVSKRRGRVIDEEMKEGTPFFIVKALIPVVESFGFA 919

Query: 209  ADLRSNTGGQAFPQCVFDHWQVLPGDP 289
             ++   T G A+PQ +F  +++L  +P
Sbjct: 920  VEILKRTSGAAYPQLIFHGFEMLDENP 946


>SPBC1306.01c ||SPBC409.22c|translation elongation factor
           G|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 770

 Score = 43.6 bits (98), Expect = 2e-05
 Identities = 21/74 (28%), Positives = 40/74 (54%)
 Frame = +2

Query: 17  LTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNES 196
           L A P ++EP+    I  P    GG+ G L++R+  + +         F ++A +P+N  
Sbjct: 668 LQANPMVLEPIMNVSITAPVEHQGGVIGNLDKRKATIVDSD--TDEDEFTLQAEVPLNSM 725

Query: 197 FGFTADLRSNTGGQ 238
           F +++D+R+ T G+
Sbjct: 726 FSYSSDIRALTKGK 739


>SPCC550.05 |nse1||Smc5-6 complex non-SMC subunit
           1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 232

 Score = 25.4 bits (53), Expect = 5.1
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +2

Query: 263 HWQVLPGDPCEPQSKPYNVVQETRKRK 343
           H+Q L GDP    + PY  VQ    RK
Sbjct: 78  HFQNLSGDPVSQMATPYPPVQIELMRK 104


>SPBC3H7.09 |mug142||palmitoyltransferase|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 350

 Score = 25.0 bits (52), Expect = 6.7
 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
 Frame = -1

Query: 507 SHLRVCFNMMRNM---CC*K*TCVKRFPYRYVFLICFNYVV 394
           SH  +C N +  +   C    TC+ R  YRY F+   + V+
Sbjct: 196 SHCHLCDNCVEYLDHHCIWLNTCIGRRNYRYYFIFLLSVVL 236


>SPAC3C7.09 |set8||lysine methyltransferase Set8
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 429

 Score = 25.0 bits (52), Expect = 6.7
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 204 LLPICVPTPADRPSRSAYSTIGRS 275
           +LP+ + TPA  P +  YS  G S
Sbjct: 109 VLPLSINTPAQWPEKEVYSLQGTS 132


>SPAC16C9.04c |||CCR4-Not complex subunit Mot2 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 489

 Score = 25.0 bits (52), Expect = 6.7
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
 Frame = +1

Query: 208 CRFAFQHRRTGL----PAVR-IRPLAGPPWRPVRTSEQALQRCTGNEKEERIEGR 357
           CRF + H +  L    PA R +       WRPV   E  +     NE+++R + R
Sbjct: 42  CRFCWHHIKEDLNGRCPACRRLYTEENVQWRPVTAEEWKMDLHRKNERKKREKER 96


>SPCC1919.14c |bdp1||transcription factor TFIIIB complex subunit
           Bdp1 |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 507

 Score = 24.6 bits (51), Expect = 8.9
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +1

Query: 265 LAGPPWRPVRTSEQALQRCTGNEKEER 345
           ++G  +RPV   E+ LQ+   N +EER
Sbjct: 435 VSGKVFRPVEEMEKELQKIRENFEEER 461


>SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit
           Sec63 |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 611

 Score = 24.6 bits (51), Expect = 8.9
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +2

Query: 92  IYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGF 205
           ++  LNR++ + F   Q+      ++ A L V  +FGF
Sbjct: 275 LFDHLNRKKTNNFNTHQILSQSDVVLNALLSVATAFGF 312


>SPCC777.11 |||sequence orphan|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 128

 Score = 24.6 bits (51), Expect = 8.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 287 PCEPQSKPYNVVQETRKRKG 346
           P  P  +P+NV Q  +KR G
Sbjct: 88  PSLPDQEPWNVFQNAKKRDG 107


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,124,023
Number of Sequences: 5004
Number of extensions: 44334
Number of successful extensions: 93
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 92
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 208287218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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