Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32211
         (444 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.43 
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    25   0.43 
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   2.3  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.9  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    20   9.2  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.6 bits (51), Expect = 0.43
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = -3

Query: 325 LVVQSERFPEFFXHGLSVLFNDELSGQSYELGEFQTTRFVGVDLLNKFLEDFL 167
           LV+ SE+   F    L ++FN  LS ++ E+     +RF  ++   +FL  +L
Sbjct: 154 LVIVSEQEWSFSTGLLVMIFNSALSYKASEIVVMLRSRFAILNKQIRFLNQYL 206


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 24.6 bits (51), Expect = 0.43
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = -3

Query: 325 LVVQSERFPEFFXHGLSVLFNDELSGQSYELGEFQTTRFVGVDLLNKFLEDFL 167
           LV+ SE+   F    L ++FN  LS ++ E+     +RF  ++   +FL  +L
Sbjct: 172 LVIVSEQEWSFSTGLLVMIFNSALSYKASEIVVMLRSRFAILNKQIRFLNQYL 224


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 160 WLPHHSQDISHEVTGDT 110
           W+PH  +  S EV G+T
Sbjct: 493 WVPHSCKLTSKEVPGET 509


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 21/68 (30%), Positives = 32/68 (47%)
 Frame = -3

Query: 409 IEFIVSQLLVQFPEDLAQARRGNVTVAFLVVQSERFPEFFXHGLSVLFNDELSGQSYELG 230
           +EF+ S  +++  ED + ARR  V   +L V    + EF  H   + F+D      +   
Sbjct: 578 MEFLKS--ILRLDEDQS-ARR--VAQKYLRVVDPDYYEFETH---IFFDDAFEISDHNDD 629

Query: 229 EFQTTRFV 206
           E Q  RFV
Sbjct: 630 ETQVNRFV 637


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 21/68 (30%), Positives = 32/68 (47%)
 Frame = -3

Query: 409 IEFIVSQLLVQFPEDLAQARRGNVTVAFLVVQSERFPEFFXHGLSVLFNDELSGQSYELG 230
           +EF+ S  +++  ED + ARR  V   +L V    + EF  H   + F+D      +   
Sbjct: 578 MEFLKS--ILRLDEDQS-ARR--VAQKYLRVVDPDYYEFETH---IFFDDAFEISDHNDD 629

Query: 229 EFQTTRFV 206
           E Q  RFV
Sbjct: 630 ETQVNRFV 637


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 21/68 (30%), Positives = 32/68 (47%)
 Frame = -3

Query: 409 IEFIVSQLLVQFPEDLAQARRGNVTVAFLVVQSERFPEFFXHGLSVLFNDELSGQSYELG 230
           +EF+ S  +++  ED + ARR  V   +L V    + EF  H   + F+D      +   
Sbjct: 578 MEFLKS--ILRLDEDQS-ARR--VAQKYLRVVDPDYYEFETH---IFFDDAFEISDHNDD 629

Query: 229 EFQTTRFV 206
           E Q  RFV
Sbjct: 630 ETQVNRFV 637


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 21/68 (30%), Positives = 32/68 (47%)
 Frame = -3

Query: 409 IEFIVSQLLVQFPEDLAQARRGNVTVAFLVVQSERFPEFFXHGLSVLFNDELSGQSYELG 230
           +EF+ S  +++  ED + ARR  V   +L V    + EF  H   + F+D      +   
Sbjct: 578 MEFLKS--ILRLDEDQS-ARR--VAQKYLRVVDPDYYEFETH---IFFDDAFEISDHNDD 629

Query: 229 EFQTTRFV 206
           E Q  RFV
Sbjct: 630 ETQVNRFV 637


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -3

Query: 151 HHSQDISHE 125
           HH Q++SHE
Sbjct: 317 HHQQNMSHE 325


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,533
Number of Sequences: 336
Number of extensions: 1559
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9985735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)